RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 M0QXV9 152 aa9.34□□□□□ -0.91
RNF4-213ENST00000509388 COX8AP10176 69 aa9.34□□□□□ -0.91
RNF4-213ENST00000509388 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
RNF4-213ENST00000509388 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
RNF4-213ENST00000509388 BOD1L2Q8IYS8 172 aa9.34□□□□□ -0.91
RNF4-213ENST00000509388 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
RNF4-213ENST00000509388 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
RNF4-213ENST00000509388 NPC2P61916 151 aa9.33□□□□□ -0.92
RNF4-213ENST00000509388 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
RNF4-213ENST00000509388 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
RNF4-213ENST00000509388 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
RNF4-213ENST00000509388 KIAA1109Q2LD37 5005 aa9.33□□□□□ -0.92
RNF4-213ENST00000509388 UBE2BP63146 152 aa9.32□□□□□ -0.92
RNF4-213ENST00000509388 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
RNF4-213ENST00000509388 LINC00528Q8N1L1 170 aa9.32□□□□□ -0.92
RNF4-213ENST00000509388 COPS9Q8WXC6 57 aa9.32□□□□□ -0.92
RNF4-213ENST00000509388 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
RNF4-213ENST00000509388 DLEU1O43261 78 aa9.31□□□□□ -0.92
RNF4-213ENST00000509388 LITAFQ99732 161 aa9.31□□□□□ -0.92
RNF4-213ENST00000509388 LOC105371267A0A1B0GV96 52 aa9.3□□□□□ -0.92
RNF4-213ENST00000509388 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.92
RNF4-213ENST00000509388 SLC25A34Q6PIV7 304 aa9.3□□□□□ -0.92
RNF4-213ENST00000509388 Q6ZVH6 145 aa9.3□□□□□ -0.92
RNF4-213ENST00000509388 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
RNF4-213ENST00000509388 KRTAP7-1Q8IUC3 87 aa9.3□□□□□ -0.92
RNF4-213ENST00000509388 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
RNF4-213ENST00000509388 RYR1P21817 5038 aa9.3□□□□□ -0.92
RNF4-213ENST00000509388 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
RNF4-213ENST00000509388 VPREB1P12018 145 aa9.29□□□□□ -0.92
RNF4-213ENST00000509388 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
RNF4-213ENST00000509388 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
RNF4-213ENST00000509388 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
RNF4-213ENST00000509388 SPANXCQ9NY87 97 aa9.29□□□□□ -0.92
RNF4-213ENST00000509388 IGLV5-37A0A075B6J1 123 aa9.28□□□□□ -0.92
RNF4-213ENST00000509388 GAGE10A6NGK3 116 aa9.28□□□□□ -0.92
RNF4-213ENST00000509388 SMIM6P0DI80 62 aa9.28□□□□□ -0.92
RNF4-213ENST00000509388 IFITM1P13164 125 aa9.28□□□□□ -0.92
RNF4-213ENST00000509388 Q8N1X5 172 aa9.28□□□□□ -0.92
RNF4-213ENST00000509388 PLA2G1BP04054 148 aaKnown RBP9.27□□□□□ -0.93
RNF4-213ENST00000509388 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.93
RNF4-213ENST00000509388 M0R378 163 aa9.26□□□□□ -0.93
RNF4-213ENST00000509388 NCR3O14931 201 aa9.26□□□□□ -0.93
RNF4-213ENST00000509388 NDUFC2O95298 119 aa9.26□□□□□ -0.93
RNF4-213ENST00000509388 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
RNF4-213ENST00000509388 Q5VSD8 79 aa9.26□□□□□ -0.93
RNF4-213ENST00000509388 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
RNF4-213ENST00000509388 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
RNF4-213ENST00000509388 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
RNF4-213ENST00000509388 HSPG2P98160 4391 aa9.25□□□□□ -0.93
RNF4-213ENST00000509388 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
RNF4-213ENST00000509388 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
RNF4-213ENST00000509388 Q8NDZ9 215 aa9.25□□□□□ -0.93
RNF4-213ENST00000509388 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
RNF4-213ENST00000509388 TRBV10-2A0A0K0K1G8 114 aa9.23□□□□□ -0.93
RNF4-213ENST00000509388 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
RNF4-213ENST00000509388 S100A7L2Q5SY68 101 aa9.23□□□□□ -0.93
RNF4-213ENST00000509388 HIGD1BQ9P298 99 aa9.23□□□□□ -0.93
RNF4-213ENST00000509388 IGKV2-28A0A075B6P5 120 aa9.22□□□□□ -0.93
RNF4-213ENST00000509388 IGKV2D-28P01615 120 aa9.22□□□□□ -0.93
RNF4-213ENST00000509388 C1orf137Q5JT78 98 aa9.22□□□□□ -0.93
RNF4-213ENST00000509388 LINC00518Q8N0U6 118 aa9.22□□□□□ -0.93
RNF4-213ENST00000509388 UQCR10Q9UDW1 63 aa9.22□□□□□ -0.93
RNF4-213ENST00000509388 PSORS1C2Q9UIG4 136 aa9.22□□□□□ -0.93
RNF4-213ENST00000509388 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
RNF4-213ENST00000509388 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
RNF4-213ENST00000509388 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
RNF4-213ENST00000509388 DDTP30046 118 aa9.19□□□□□ -0.94
RNF4-213ENST00000509388 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
RNF4-213ENST00000509388 C12orf57Q99622 126 aa9.19□□□□□ -0.94
RNF4-213ENST00000509388 FAT1Q14517 4588 aa9.19□□□□□ -0.94
RNF4-213ENST00000509388 C2orf91Q6ZV80 131 aa9.18□□□□□ -0.94
RNF4-213ENST00000509388 PRO1933Q9H354 126 aa9.18□□□□□ -0.94
RNF4-213ENST00000509388 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
RNF4-213ENST00000509388 REG3GQ6UW15 175 aa9.17□□□□□ -0.94
RNF4-213ENST00000509388 CBY1Q9Y3M2 126 aa9.17□□□□□ -0.94
RNF4-213ENST00000509388 A4D1N5 150 aa9.16□□□□□ -0.94
RNF4-213ENST00000509388 A6NDN8 102 aa9.16□□□□□ -0.94
RNF4-213ENST00000509388 HNRNPA3P51991 378 aaKnown RBP9.16□□□□□ -0.94
RNF4-213ENST00000509388 TAL2Q16559 108 aa9.16□□□□□ -0.94
RNF4-213ENST00000509388 TMEM126AQ9H061 195 aa9.16□□□□□ -0.94
RNF4-213ENST00000509388 HERC2O95714 4834 aa9.15□□□□□ -0.94
RNF4-213ENST00000509388 PRYO14603 147 aa9.15□□□□□ -0.94
RNF4-213ENST00000509388 BCE1O60756 84 aa9.15□□□□□ -0.94
RNF4-213ENST00000509388 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.94
RNF4-213ENST00000509388 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
RNF4-213ENST00000509388 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
RNF4-213ENST00000509388 IGLV7-43P04211 117 aa9.14□□□□□ -0.95
RNF4-213ENST00000509388 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
RNF4-213ENST00000509388 TSTD3H0UI37 97 aa9.13□□□□□ -0.95
RNF4-213ENST00000509388 UBE2AP49459 152 aa9.13□□□□□ -0.95
RNF4-213ENST00000509388 HSD52Q0P140 79 aa9.13□□□□□ -0.95
RNF4-213ENST00000509388 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
RNF4-213ENST00000509388 CEND1Q8N111 149 aa9.13□□□□□ -0.95
RNF4-213ENST00000509388 LINC00337Q8N6G1 96 aa9.13□□□□□ -0.95
RNF4-213ENST00000509388 TRAV23DV6A0A075B6W5 121 aa9.12□□□□□ -0.95
RNF4-213ENST00000509388 TMEM238LA0A1B0GVL6 79 aa9.12□□□□□ -0.95
RNF4-213ENST00000509388 A6NJY4 79 aa9.12□□□□□ -0.95
RNF4-213ENST00000509388 KRTAP10-4P60372 401 aaPredicted RBP9.12□□□□□ -0.95
RNF4-213ENST00000509388 ETDCA0A1B0GVM5 59 aa9.11□□□□□ -0.95
RNF4-213ENST00000509388 RPL28P46779 137 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms