RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 FAM229BQ4G0N7 80 aa7.3□□□□□ -1.24
PDPN-208ENST00000509009 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
PDPN-208ENST00000509009 TMEM126AQ9H061 195 aa7.3□□□□□ -1.24
PDPN-208ENST00000509009 M0R378 163 aa7.29□□□□□ -1.24
PDPN-208ENST00000509009 PRLHP81277 87 aa7.28□□□□□ -1.24
PDPN-208ENST00000509009 FAM19A1Q7Z5A9 133 aa7.28□□□□□ -1.24
PDPN-208ENST00000509009 CHTOPQ9Y3Y2 248 aaKnown RBP7.28□□□□□ -1.24
PDPN-208ENST00000509009 SFTA2Q6UW10 78 aa7.27□□□□□ -1.25
PDPN-208ENST00000509009 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
PDPN-208ENST00000509009 IGKV2D-26A0A0A0MRZ7 120 aa7.26□□□□□ -1.25
PDPN-208ENST00000509009 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
PDPN-208ENST00000509009 LINC00158P58513 81 aa7.26□□□□□ -1.25
PDPN-208ENST00000509009 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
PDPN-208ENST00000509009 MUC2Q02817 5179 aa7.25□□□□□ -1.25
PDPN-208ENST00000509009 TRAV12-1A0A0B4J245 112 aa7.25□□□□□ -1.25
PDPN-208ENST00000509009 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
PDPN-208ENST00000509009 IFI27L1Q96BM0 104 aa7.25□□□□□ -1.25
PDPN-208ENST00000509009 CHCHD1Q96BP2 118 aaKnown RBP7.24□□□□□ -1.25
PDPN-208ENST00000509009 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
PDPN-208ENST00000509009 SMIM13P0DJ93 91 aa7.22□□□□□ -1.25
PDPN-208ENST00000509009 CTAG1AP78358 180 aa7.22□□□□□ -1.25
PDPN-208ENST00000509009 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
PDPN-208ENST00000509009 HIGD2AQ9BW72 106 aa7.22□□□□□ -1.25
PDPN-208ENST00000509009 FAM19A2Q8N3H0 131 aa7.2□□□□□ -1.26
PDPN-208ENST00000509009 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
PDPN-208ENST00000509009 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
PDPN-208ENST00000509009 BOD1L2Q8IYS8 172 aa7.19□□□□□ -1.26
PDPN-208ENST00000509009 SPRR4Q96PI1 79 aa7.19□□□□□ -1.26
PDPN-208ENST00000509009 HERV-K104P63124 156 aa7.18□□□□□ -1.26
PDPN-208ENST00000509009 MEIG1Q5JSS6 88 aa7.18□□□□□ -1.26
PDPN-208ENST00000509009 MIR7-3HGQ8N6C7 128 aa7.18□□□□□ -1.26
PDPN-208ENST00000509009 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
PDPN-208ENST00000509009 LINC00587B1AMM8 73 aa7.17□□□□□ -1.26
PDPN-208ENST00000509009 PRYO14603 147 aa7.17□□□□□ -1.26
PDPN-208ENST00000509009 HSBP1O75506 76 aa7.17□□□□□ -1.26
PDPN-208ENST00000509009 TRGC2P03986 189 aa7.17□□□□□ -1.26
PDPN-208ENST00000509009 SPRR1AP35321 89 aa7.17□□□□□ -1.26
PDPN-208ENST00000509009 LINC00337Q8N6G1 96 aa7.17□□□□□ -1.26
PDPN-208ENST00000509009 NDUFA12Q9UI09 145 aa7.17□□□□□ -1.26
PDPN-208ENST00000509009 A0A0U1RQV1 116 aa7.16□□□□□ -1.26
PDPN-208ENST00000509009 MYMXA0A1B0GTQ4 84 aa7.16□□□□□ -1.26
PDPN-208ENST00000509009 KRTAP4-16G5E9R7 235 aaPredicted RBP7.16□□□□□ -1.26
PDPN-208ENST00000509009 NCR3O14931 201 aa7.16□□□□□ -1.26
PDPN-208ENST00000509009 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
PDPN-208ENST00000509009 SPAG11AQ6PDA7 123 aa7.16□□□□□ -1.26
PDPN-208ENST00000509009 SMCR5Q8TEV8 140 aa7.16□□□□□ -1.26
PDPN-208ENST00000509009 CDIP1Q9H305 208 aa7.15□□□□□ -1.26
PDPN-208ENST00000509009 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
PDPN-208ENST00000509009 LOC107984156A0A0G2JMH3 177 aa7.14□□□□□ -1.27
PDPN-208ENST00000509009 TRBV10-3A0A0K0K1G6 114 aa7.14□□□□□ -1.27
PDPN-208ENST00000509009 H0Y8G0 127 aa7.14□□□□□ -1.27
PDPN-208ENST00000509009 LEPROTO15243 131 aa7.14□□□□□ -1.27
PDPN-208ENST00000509009 ARL17AQ8IVW1 177 aa7.14□□□□□ -1.27
PDPN-208ENST00000509009 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
PDPN-208ENST00000509009 PPDPFQ9H3Y8 114 aa7.14□□□□□ -1.27
PDPN-208ENST00000509009 ETDCA0A1B0GVM5 59 aa7.13□□□□□ -1.27
PDPN-208ENST00000509009 LEPROTL1O95214 131 aa7.13□□□□□ -1.27
PDPN-208ENST00000509009 LINC00310P59036 64 aa7.13□□□□□ -1.27
PDPN-208ENST00000509009 TSPEAR-AS2P59090 65 aa7.13□□□□□ -1.27
PDPN-208ENST00000509009 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
PDPN-208ENST00000509009 LOC105371267A0A1B0GV96 52 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BKO60814 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 SERF1AO75920 110 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BJP06899 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BOP23527 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BBP33778 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BDP58876 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BCP62807 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST2H2BEQ16778 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.12□□□□□ -1.27
PDPN-208ENST00000509009 DAND5Q8N907 189 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BHQ93079 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BNQ99877 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 HIST1H2BMQ99879 126 aa7.12□□□□□ -1.27
PDPN-208ENST00000509009 B5MCH6 92 aa7.11□□□□□ -1.27
PDPN-208ENST00000509009 Q8NBF4 154 aa7.11□□□□□ -1.27
PDPN-208ENST00000509009 C5orf52A6NGY3 159 aa7.1□□□□□ -1.27
PDPN-208ENST00000509009 J3QQQ9 107 aa7.1□□□□□ -1.27
PDPN-208ENST00000509009 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
PDPN-208ENST00000509009 FABP4P15090 132 aa7.1□□□□□ -1.27
PDPN-208ENST00000509009 PLNP26678 52 aa7.1□□□□□ -1.27
PDPN-208ENST00000509009 LINC00483Q53H64 154 aa7.1□□□□□ -1.27
PDPN-208ENST00000509009 COA6Q5JTJ3 125 aaKnown RBP7.1□□□□□ -1.27
PDPN-208ENST00000509009 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
PDPN-208ENST00000509009 TRBV10-2A0A0K0K1G8 114 aa7.09□□□□□ -1.27
PDPN-208ENST00000509009 DPM2O94777 84 aa7.09□□□□□ -1.27
PDPN-208ENST00000509009 S100A12P80511 92 aa7.09□□□□□ -1.27
PDPN-208ENST00000509009 GAGE2AQ6NT46 116 aa7.09□□□□□ -1.27
PDPN-208ENST00000509009 FP248Q71RG6 208 aaPredicted RBP7.09□□□□□ -1.27
PDPN-208ENST00000509009 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
PDPN-208ENST00000509009 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
PDPN-208ENST00000509009 SPINK1P00995 79 aa7.08□□□□□ -1.28
PDPN-208ENST00000509009 S100A6P06703 90 aa7.08□□□□□ -1.28
PDPN-208ENST00000509009 DDTP30046 118 aa7.08□□□□□ -1.28
PDPN-208ENST00000509009 SNRPEP62304 92 aaKnown RBP7.08□□□□□ -1.28
PDPN-208ENST00000509009 PMCHL2Q9BQD1 86 aa7.08□□□□□ -1.28
PDPN-208ENST00000509009 HSPB8Q9UJY1 196 aa7.08□□□□□ -1.28
PDPN-208ENST00000509009 IGKCP01834 107 aa7.07□□□□□ -1.28
PDPN-208ENST00000509009 NMUP48645 174 aa7.07□□□□□ -1.28
PDPN-208ENST00000509009 Q9BRP9 147 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms