RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 RPL28P46779 137 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-228ENST00000508974 FAM19A2Q8N3H0 131 aa8.85□□□□□ -0.99
UBE2D3-228ENST00000508974 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
UBE2D3-228ENST00000508974 SND1-IT1Q9HBX3 110 aa8.85□□□□□ -0.99
UBE2D3-228ENST00000508974 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
UBE2D3-228ENST00000508974 H0Y8G0 127 aa8.84□□□□□ -0.99
UBE2D3-228ENST00000508974 HSBP1O75506 76 aa8.83□□□□□ -1
UBE2D3-228ENST00000508974 KRTAP9-6A0A140TA67 174 aa8.82□□□□□ -1
UBE2D3-228ENST00000508974 TMEM223A0PJW6 202 aa8.82□□□□□ -1
UBE2D3-228ENST00000508974 TRGC2P03986 189 aa8.82□□□□□ -1
UBE2D3-228ENST00000508974 VPREB1P12018 145 aa8.82□□□□□ -1
UBE2D3-228ENST00000508974 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
UBE2D3-228ENST00000508974 UBE2AP49459 152 aa8.82□□□□□ -1
UBE2D3-228ENST00000508974 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
UBE2D3-228ENST00000508974 Q8NDZ9 215 aa8.82□□□□□ -1
UBE2D3-228ENST00000508974 TRAV12-1A0A0B4J245 112 aa8.81□□□□□ -1
UBE2D3-228ENST00000508974 LINC00158P58513 81 aa8.81□□□□□ -1
UBE2D3-228ENST00000508974 COX17Q14061 63 aa8.81□□□□□ -1
UBE2D3-228ENST00000508974 TMEM238C9JI98 176 aa8.8□□□□□ -1
UBE2D3-228ENST00000508974 ANAPC11Q9NYG5 84 aa8.8□□□□□ -1
UBE2D3-228ENST00000508974 LPAP08519 4548 aa8.79□□□□□ -1
UBE2D3-228ENST00000508974 A0A087X002 238 aa8.79□□□□□ -1
UBE2D3-228ENST00000508974 PRLHP81277 87 aa8.79□□□□□ -1
UBE2D3-228ENST00000508974 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
UBE2D3-228ENST00000508974 SFTA2Q6UW10 78 aa8.79□□□□□ -1
UBE2D3-228ENST00000508974 RNF213Q63HN8 5207 aa8.79□□□□□ -1
UBE2D3-228ENST00000508974 SERF1AO75920 110 aa8.78□□□□□ -1
UBE2D3-228ENST00000508974 FAM19A1Q7Z5A9 133 aa8.78□□□□□ -1
UBE2D3-228ENST00000508974 TSPAN13O95857 204 aa8.77□□□□□ -1.01
UBE2D3-228ENST00000508974 SMIM13P0DJ93 91 aa8.77□□□□□ -1.01
UBE2D3-228ENST00000508974 LINC00310P59036 64 aa8.77□□□□□ -1.01
UBE2D3-228ENST00000508974 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
UBE2D3-228ENST00000508974 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
UBE2D3-228ENST00000508974 TMEM126AQ9H061 195 aa8.77□□□□□ -1.01
UBE2D3-228ENST00000508974 LEPROTL1O95214 131 aa8.76□□□□□ -1.01
UBE2D3-228ENST00000508974 ATP6V1G1O75348 118 aa8.75□□□□□ -1.01
UBE2D3-228ENST00000508974 CRYGAP11844 174 aa8.75□□□□□ -1.01
UBE2D3-228ENST00000508974 FABP4P15090 132 aa8.75□□□□□ -1.01
UBE2D3-228ENST00000508974 PRR4Q16378 134 aa8.75□□□□□ -1.01
UBE2D3-228ENST00000508974 TYMSOSQ8TAI1 123 aa8.75□□□□□ -1.01
UBE2D3-228ENST00000508974 M0R378 163 aa8.74□□□□□ -1.01
UBE2D3-228ENST00000508974 NCR3O14931 201 aa8.73□□□□□ -1.01
UBE2D3-228ENST00000508974 PMCHL2Q9BQD1 86 aa8.73□□□□□ -1.01
UBE2D3-228ENST00000508974 NDUFA12Q9UI09 145 aa8.73□□□□□ -1.01
UBE2D3-228ENST00000508974 TSPEAR-AS2P59090 65 aa8.72□□□□□ -1.01
UBE2D3-228ENST00000508974 BOD1L2Q8IYS8 172 aa8.72□□□□□ -1.01
UBE2D3-228ENST00000508974 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
UBE2D3-228ENST00000508974 KRTAP4-12Q9BQ66 201 aa8.72□□□□□ -1.01
UBE2D3-228ENST00000508974 COLCA2A8K830 154 aa8.71□□□□□ -1.02
UBE2D3-228ENST00000508974 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
UBE2D3-228ENST00000508974 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
UBE2D3-228ENST00000508974 HERV-K104P63124 156 aa8.7□□□□□ -1.02
UBE2D3-228ENST00000508974 HIGD2AQ9BW72 106 aa8.7□□□□□ -1.02
UBE2D3-228ENST00000508974 HSPB8Q9UJY1 196 aa8.7□□□□□ -1.02
UBE2D3-228ENST00000508974 PLNP26678 52 aa8.69□□□□□ -1.02
UBE2D3-228ENST00000508974 DAND5Q8N907 189 aa8.69□□□□□ -1.02
UBE2D3-228ENST00000508974 LEPROTO15243 131 aa8.68□□□□□ -1.02
UBE2D3-228ENST00000508974 DPM2O94777 84 aa8.68□□□□□ -1.02
UBE2D3-228ENST00000508974 FAM229BQ4G0N7 80 aa8.67□□□□□ -1.02
UBE2D3-228ENST00000508974 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
UBE2D3-228ENST00000508974 IGKV2D-26A0A0A0MRZ7 120 aa8.66□□□□□ -1.02
UBE2D3-228ENST00000508974 J3QQQ9 107 aa8.66□□□□□ -1.02
UBE2D3-228ENST00000508974 IGKCP01834 107 aa8.66□□□□□ -1.02
UBE2D3-228ENST00000508974 HERVK_113P61574 105 aa8.66□□□□□ -1.02
UBE2D3-228ENST00000508974 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
UBE2D3-228ENST00000508974 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
UBE2D3-228ENST00000508974 KRTAP19-1Q8IUB9 90 aa8.65□□□□□ -1.02
UBE2D3-228ENST00000508974 TRBV10-3A0A0K0K1G6 114 aa8.64□□□□□ -1.03
UBE2D3-228ENST00000508974 PRYO14603 147 aa8.64□□□□□ -1.03
UBE2D3-228ENST00000508974 LGALS3P17931 250 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-228ENST00000508974 C3orf22Q8N5N4 141 aa8.64□□□□□ -1.03
UBE2D3-228ENST00000508974 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
UBE2D3-228ENST00000508974 RETNLBQ9BQ08 111 aa8.64□□□□□ -1.03
UBE2D3-228ENST00000508974 ETDCA0A1B0GVM5 59 aa8.62□□□□□ -1.03
UBE2D3-228ENST00000508974 NPC2P61916 151 aa8.62□□□□□ -1.03
UBE2D3-228ENST00000508974 LCE3BQ5TA77 95 aa8.62□□□□□ -1.03
UBE2D3-228ENST00000508974 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BKO60814 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BJP06899 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BOP23527 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BBP33778 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 NMUP48645 174 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BDP58876 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BCP62807 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST2H2BEQ16778 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BHQ93079 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BNQ99877 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 HIST1H2BMQ99879 126 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 MIEN1Q9BRT3 115 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 PPDPFQ9H3Y8 114 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
UBE2D3-228ENST00000508974 DDTP30046 118 aa8.59□□□□□ -1.03
UBE2D3-228ENST00000508974 LINC00337Q8N6G1 96 aa8.59□□□□□ -1.03
UBE2D3-228ENST00000508974 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
UBE2D3-228ENST00000508974 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
UBE2D3-228ENST00000508974 SPRR1AP35321 89 aa8.58□□□□□ -1.04
UBE2D3-228ENST00000508974 S100A12P80511 92 aa8.58□□□□□ -1.04
UBE2D3-228ENST00000508974 ZNF706Q9Y5V0 76 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-228ENST00000508974 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms