RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 COX17Q14061 63 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 ORMDL2Q53FV1 153 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 GAGE2AQ6NT46 116 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 SMCR5Q8TEV8 140 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 PRELID3AQ96N28 172 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 LIMD2Q9BT23 127 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 LAMTOR2Q9Y2Q5 125 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 IGLV5-45A0A087WSX0 123 aa5.95□□□□□ -1.46
NEDD9-212ENST00000508800 PRYO14603 147 aa5.95□□□□□ -1.46
NEDD9-212ENST00000508800 RAB14P61106 215 aa5.95□□□□□ -1.46
NEDD9-212ENST00000508800 LOC389332A0A1B0GUA5 103 aa5.94□□□□□ -1.46
NEDD9-212ENST00000508800 TINCRA0A1B0GVN0 87 aa5.94□□□□□ -1.46
NEDD9-212ENST00000508800 SMIM27A0A1W2PRY6 76 aa5.94□□□□□ -1.46
NEDD9-212ENST00000508800 IGLV6-57P01721 117 aa5.94□□□□□ -1.46
NEDD9-212ENST00000508800 G0S2P27469 103 aa5.94□□□□□ -1.46
NEDD9-212ENST00000508800 TMEM136Q6ZRR5 245 aa5.94□□□□□ -1.46
NEDD9-212ENST00000508800 TIMM17AQ99595 171 aa5.94□□□□□ -1.46
NEDD9-212ENST00000508800 ETDCA0A1B0GVM5 59 aa5.93□□□□□ -1.46
NEDD9-212ENST00000508800 MAP1LC3AQ9H492 121 aa5.93□□□□□ -1.46
NEDD9-212ENST00000508800 SPRR1AP35321 89 aa5.92□□□□□ -1.46
NEDD9-212ENST00000508800 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
NEDD9-212ENST00000508800 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
NEDD9-212ENST00000508800 Q8N8P6 123 aa5.92□□□□□ -1.46
NEDD9-212ENST00000508800 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
NEDD9-212ENST00000508800 Q8NDZ9 215 aa5.91□□□□□ -1.46
NEDD9-212ENST00000508800 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
NEDD9-212ENST00000508800 KCNQ1DNQ9H478 68 aa5.91□□□□□ -1.46
NEDD9-212ENST00000508800 A0A1B0GXF2 115 aa5.9□□□□□ -1.46
NEDD9-212ENST00000508800 H3BRM9 83 aa5.9□□□□□ -1.46
NEDD9-212ENST00000508800 SPINK8P0C7L1 97 aa5.9□□□□□ -1.46
NEDD9-212ENST00000508800 C9orf153Q5TBE3 101 aa5.9□□□□□ -1.46
NEDD9-212ENST00000508800 MRPL54Q6P161 138 aaKnown RBP5.9□□□□□ -1.46
NEDD9-212ENST00000508800 SFTA2Q6UW10 78 aa5.9□□□□□ -1.46
NEDD9-212ENST00000508800 BLOC1S1P78537 153 aa5.88□□□□□ -1.47
NEDD9-212ENST00000508800 S100A12P80511 92 aa5.88□□□□□ -1.47
NEDD9-212ENST00000508800 Q6Q795 121 aa5.88□□□□□ -1.47
NEDD9-212ENST00000508800 ERASQ7Z444 233 aa5.88□□□□□ -1.47
NEDD9-212ENST00000508800 ATP5L2Q7Z4Y8 100 aa5.88□□□□□ -1.47
NEDD9-212ENST00000508800 NXT2Q9NPJ8 142 aaKnown RBP5.88□□□□□ -1.47
NEDD9-212ENST00000508800 TRAV9-1A0A075B6T8 112 aa5.87□□□□□ -1.47
NEDD9-212ENST00000508800 SLC51BQ86UW2 128 aa5.87□□□□□ -1.47
NEDD9-212ENST00000508800 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
NEDD9-212ENST00000508800 IGLV5-39A0A0G2JS06 123 aa5.86□□□□□ -1.47
NEDD9-212ENST00000508800 LINC01549A6NIU2 74 aa5.86□□□□□ -1.47
NEDD9-212ENST00000508800 NEBP20929 6669 aa5.85□□□□□ -1.47
NEDD9-212ENST00000508800 RPL23P62829 140 aaKnown RBP5.85□□□□□ -1.47
NEDD9-212ENST00000508800 ADIRFQ15847 76 aa5.85□□□□□ -1.47
NEDD9-212ENST00000508800 ALKAL2Q6UX46 152 aa5.85□□□□□ -1.47
NEDD9-212ENST00000508800 B5MCH6 92 aa5.84□□□□□ -1.47
NEDD9-212ENST00000508800 ERC2-IT1O76042 136 aa5.84□□□□□ -1.47
NEDD9-212ENST00000508800 SCGB3A1Q96QR1 104 aa5.84□□□□□ -1.47
NEDD9-212ENST00000508800 CST9LQ9H4G1 147 aa5.83□□□□□ -1.48
NEDD9-212ENST00000508800 MT2AP02795 61 aa5.82□□□□□ -1.48
NEDD9-212ENST00000508800 SRP19P09132 144 aaKnown RBP5.82□□□□□ -1.48
NEDD9-212ENST00000508800 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
NEDD9-212ENST00000508800 ZNF625Q96I27 306 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-212ENST00000508800 C5orf52A6NGY3 159 aa5.81□□□□□ -1.48
NEDD9-212ENST00000508800 LINC00158P58513 81 aa5.81□□□□□ -1.48
NEDD9-212ENST00000508800 KIAA1644Q3SXP7 199 aa5.81□□□□□ -1.48
NEDD9-212ENST00000508800 Q6ZRX8 168 aa5.81□□□□□ -1.48
NEDD9-212ENST00000508800 Q9BRP9 147 aa5.81□□□□□ -1.48
NEDD9-212ENST00000508800 NAT8Q9UHE5 227 aa5.81□□□□□ -1.48
NEDD9-212ENST00000508800 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
NEDD9-212ENST00000508800 C20orf202A1L168 122 aa5.8□□□□□ -1.48
NEDD9-212ENST00000508800 JOSD1Q15040 202 aaPredicted RBP5.8□□□□□ -1.48
NEDD9-212ENST00000508800 PMVKQ15126 192 aa5.8□□□□□ -1.48
NEDD9-212ENST00000508800 RGS21Q2M5E4 152 aa5.8□□□□□ -1.48
NEDD9-212ENST00000508800 BOD1L2Q8IYS8 172 aa5.8□□□□□ -1.48
NEDD9-212ENST00000508800 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
NEDD9-212ENST00000508800 NCR3O14931 201 aa5.79□□□□□ -1.48
NEDD9-212ENST00000508800 CD164Q04900 197 aa5.79□□□□□ -1.48
NEDD9-212ENST00000508800 SLC25A34Q6PIV7 304 aa5.79□□□□□ -1.48
NEDD9-212ENST00000508800 FA2HQ7L5A8 372 aa5.79□□□□□ -1.48
NEDD9-212ENST00000508800 BATF3Q9NR55 127 aa5.79□□□□□ -1.48
NEDD9-212ENST00000508800 ATP6V1G1O75348 118 aa5.78□□□□□ -1.48
NEDD9-212ENST00000508800 Q5XG85 94 aa5.78□□□□□ -1.48
NEDD9-212ENST00000508800 HRCT1Q6UXD1 115 aa5.78□□□□□ -1.48
NEDD9-212ENST00000508800 IGLC3P0DOY3 106 aa5.77□□□□□ -1.49
NEDD9-212ENST00000508800 ADCYAP1P18509 176 aa5.77□□□□□ -1.49
NEDD9-212ENST00000508800 MT1FP04733 61 aa5.76□□□□□ -1.49
NEDD9-212ENST00000508800 KRTAP10-10P60014 251 aa5.76□□□□□ -1.49
NEDD9-212ENST00000508800 ZNF22P17026 224 aaPredicted RBP5.75□□□□□ -1.49
NEDD9-212ENST00000508800 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
NEDD9-212ENST00000508800 ATP11AUNQ6ZP68 121 aa5.75□□□□□ -1.49
NEDD9-212ENST00000508800 C1orf195Q5TG92 126 aa5.74□□□□□ -1.49
NEDD9-212ENST00000508800 DDTP30046 118 aa5.73□□□□□ -1.49
NEDD9-212ENST00000508800 TRBV10-2A0A0K0K1G8 114 aa5.72□□□□□ -1.49
NEDD9-212ENST00000508800 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
NEDD9-212ENST00000508800 SPRR1BP22528 89 aa5.72□□□□□ -1.49
NEDD9-212ENST00000508800 LAMTOR3Q9UHA4 124 aa5.72□□□□□ -1.49
NEDD9-212ENST00000508800 TRBV20-1A0A075B6N2 111 aa5.71□□□□□ -1.5
NEDD9-212ENST00000508800 LINC00587B1AMM8 73 aa5.71□□□□□ -1.5
NEDD9-212ENST00000508800 H7C2G1 150 aa5.71□□□□□ -1.5
NEDD9-212ENST00000508800 C10orf91Q5T1B1 145 aa5.71□□□□□ -1.5
NEDD9-212ENST00000508800 LINC01546A6NGU7 62 aa5.7□□□□□ -1.5
NEDD9-212ENST00000508800 SMIM13P0DJ93 91 aa5.7□□□□□ -1.5
NEDD9-212ENST00000508800 SMIM29Q86T20 159 aa5.7□□□□□ -1.5
NEDD9-212ENST00000508800 MIR7-3HGQ8N6C7 128 aa5.7□□□□□ -1.5
NEDD9-212ENST00000508800 ST20-AS1Q8NBB2 130 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms