RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 COX7B2Q8TF08 81 aa4.82□□□□□ -1.64
UBE2D3-222ENST00000508238 IGLV5-39A0A0G2JS06 123 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 H0Y9J4 135 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 COX17Q14061 63 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 BAGE3Q86Y29 109 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 C18orf32Q8TCD1 76 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
UBE2D3-222ENST00000508238 NUPR1O60356 82 aa4.8□□□□□ -1.64
UBE2D3-222ENST00000508238 IGLV1-50A0A075B6I6 118 aa4.79□□□□□ -1.64
UBE2D3-222ENST00000508238 HSBP1O75506 76 aa4.79□□□□□ -1.64
UBE2D3-222ENST00000508238 KRTAP1-4P0C5Y4 121 aa4.79□□□□□ -1.64
UBE2D3-222ENST00000508238 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
UBE2D3-222ENST00000508238 RPL24P83731 157 aaKnown RBP4.79□□□□□ -1.64
UBE2D3-222ENST00000508238 XAGE1AQ9HD64 81 aa4.79□□□□□ -1.64
UBE2D3-222ENST00000508238 C22orf24Q9Y442 160 aa4.79□□□□□ -1.64
UBE2D3-222ENST00000508238 A0A096LNJ9 63 aa4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 TRAV12-1A0A0B4J245 112 aa4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 ZNF861PO60384 105 aa4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 ATP6V1G1O75348 118 aa4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 TMEM170BQ5T4T1 132 aa4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 URB1-AS1Q96HZ7 61 aa4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 CHTOPQ9Y3Y2 248 aaKnown RBP4.78□□□□□ -1.64
UBE2D3-222ENST00000508238 SPINK8P0C7L1 97 aa4.77□□□□□ -1.65
UBE2D3-222ENST00000508238 MRPL55Q7Z7F7 128 aaKnown RBP4.77□□□□□ -1.65
UBE2D3-222ENST00000508238 NKAPP1Q8N9T2 125 aa4.77□□□□□ -1.65
UBE2D3-222ENST00000508238 IFI27L1Q96BM0 104 aa4.77□□□□□ -1.65
UBE2D3-222ENST00000508238 HSPB8Q9UJY1 196 aa4.77□□□□□ -1.65
UBE2D3-222ENST00000508238 IGLV5-37A0A075B6J1 123 aa4.76□□□□□ -1.65
UBE2D3-222ENST00000508238 RPL28P46779 137 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-222ENST00000508238 MAP1LC3CQ9BXW4 147 aa4.76□□□□□ -1.65
UBE2D3-222ENST00000508238 BCE1O60756 84 aa4.75□□□□□ -1.65
UBE2D3-222ENST00000508238 LEPROTL1O95214 131 aa4.75□□□□□ -1.65
UBE2D3-222ENST00000508238 RPL13AP40429 203 aaKnown RBP4.75□□□□□ -1.65
UBE2D3-222ENST00000508238 HERV-K104P63124 156 aa4.75□□□□□ -1.65
UBE2D3-222ENST00000508238 S100A12P80511 92 aa4.75□□□□□ -1.65
UBE2D3-222ENST00000508238 LINC00167Q96N53 147 aa4.75□□□□□ -1.65
UBE2D3-222ENST00000508238 TRGC2P03986 189 aa4.74□□□□□ -1.65
UBE2D3-222ENST00000508238 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-222ENST00000508238 PFN2P35080 140 aa4.74□□□□□ -1.65
UBE2D3-222ENST00000508238 PMCHL1Q16048 86 aa4.74□□□□□ -1.65
UBE2D3-222ENST00000508238 YPEL4Q96NS1 127 aa4.74□□□□□ -1.65
UBE2D3-222ENST00000508238 ERG28Q9UKR5 140 aa4.74□□□□□ -1.65
UBE2D3-222ENST00000508238 MYMXA0A1B0GTQ4 84 aa4.73□□□□□ -1.65
UBE2D3-222ENST00000508238 C11orf86A6NJI1 115 aa4.73□□□□□ -1.65
UBE2D3-222ENST00000508238 PLNP26678 52 aa4.73□□□□□ -1.65
UBE2D3-222ENST00000508238 LINC00158P58513 81 aa4.73□□□□□ -1.65
UBE2D3-222ENST00000508238 HERVK_113P61574 105 aa4.73□□□□□ -1.65
UBE2D3-222ENST00000508238 RPL37AP8A6NKH3 93 aa4.72□□□□□ -1.65
UBE2D3-222ENST00000508238 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
UBE2D3-222ENST00000508238 CBLN2Q8IUK8 224 aa4.72□□□□□ -1.65
UBE2D3-222ENST00000508238 ZNF625Q96I27 306 aaPredicted RBP4.72□□□□□ -1.65
UBE2D3-222ENST00000508238 SND1-IT1Q9HBX3 110 aa4.72□□□□□ -1.65
UBE2D3-222ENST00000508238 RNF213Q63HN8 5207 aa4.71□□□□□ -1.65
UBE2D3-222ENST00000508238 TMEM223A0PJW6 202 aa4.71□□□□□ -1.66
UBE2D3-222ENST00000508238 IGKV2-30P06310 120 aa4.71□□□□□ -1.66
UBE2D3-222ENST00000508238 VPREB1P12018 145 aa4.71□□□□□ -1.66
UBE2D3-222ENST00000508238 UBE2AP49459 152 aa4.71□□□□□ -1.66
UBE2D3-222ENST00000508238 SLC7A5P1Q8MH63 180 aa4.71□□□□□ -1.66
UBE2D3-222ENST00000508238 PLEKHB2Q96CS7 222 aa4.71□□□□□ -1.66
UBE2D3-222ENST00000508238 CBY1Q9Y3M2 126 aa4.71□□□□□ -1.66
UBE2D3-222ENST00000508238 CRYGAP11844 174 aa4.7□□□□□ -1.66
UBE2D3-222ENST00000508238 NMUP48645 174 aa4.7□□□□□ -1.66
UBE2D3-222ENST00000508238 AKR1D1P51857 326 aa4.7□□□□□ -1.66
UBE2D3-222ENST00000508238 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
UBE2D3-222ENST00000508238 FAM19A2Q8N3H0 131 aa4.7□□□□□ -1.66
UBE2D3-222ENST00000508238 A0A087X002 238 aa4.69□□□□□ -1.66
UBE2D3-222ENST00000508238 IGKV2D-26A0A0A0MRZ7 120 aa4.69□□□□□ -1.66
UBE2D3-222ENST00000508238 COLCA2A8K830 154 aa4.69□□□□□ -1.66
UBE2D3-222ENST00000508238 M0R378 163 aa4.69□□□□□ -1.66
UBE2D3-222ENST00000508238 SERF1AO75920 110 aa4.69□□□□□ -1.66
UBE2D3-222ENST00000508238 DPM2O94777 84 aa4.69□□□□□ -1.66
UBE2D3-222ENST00000508238 NDUFA12Q9UI09 145 aa4.69□□□□□ -1.66
UBE2D3-222ENST00000508238 H0Y8G0 127 aa4.68□□□□□ -1.66
UBE2D3-222ENST00000508238 LEPROTO15243 131 aa4.68□□□□□ -1.66
UBE2D3-222ENST00000508238 IGKCP01834 107 aa4.68□□□□□ -1.66
UBE2D3-222ENST00000508238 CTAG1AP78358 180 aa4.68□□□□□ -1.66
UBE2D3-222ENST00000508238 FAM229BQ4G0N7 80 aa4.68□□□□□ -1.66
UBE2D3-222ENST00000508238 MIEN1Q9BRT3 115 aa4.68□□□□□ -1.66
UBE2D3-222ENST00000508238 IGKV2-28A0A075B6P5 120 aa4.67□□□□□ -1.66
UBE2D3-222ENST00000508238 SCO1O75880 301 aa4.67□□□□□ -1.66
UBE2D3-222ENST00000508238 IGKV2D-28P01615 120 aa4.67□□□□□ -1.66
UBE2D3-222ENST00000508238 FABP4P15090 132 aa4.67□□□□□ -1.66
UBE2D3-222ENST00000508238 LGALS3P17931 250 aaKnown RBP4.67□□□□□ -1.66
UBE2D3-222ENST00000508238 Q8NDZ9 215 aa4.67□□□□□ -1.66
UBE2D3-222ENST00000508238 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
UBE2D3-222ENST00000508238 LPAP08519 4548 aa4.66□□□□□ -1.66
UBE2D3-222ENST00000508238 TMEM238C9JI98 176 aa4.66□□□□□ -1.66
UBE2D3-222ENST00000508238 J3QQQ9 107 aa4.66□□□□□ -1.66
UBE2D3-222ENST00000508238 BOD1L2Q8IYS8 172 aa4.66□□□□□ -1.66
UBE2D3-222ENST00000508238 TYMSOSQ8TAI1 123 aa4.66□□□□□ -1.66
UBE2D3-222ENST00000508238 SMIM13P0DJ93 91 aa4.65□□□□□ -1.67
UBE2D3-222ENST00000508238 HINT1P49773 126 aaPredicted RBP4.65□□□□□ -1.67
UBE2D3-222ENST00000508238 KRTAP13-2Q52LG2 175 aa4.65□□□□□ -1.67
UBE2D3-222ENST00000508238 PET117Q6UWS5 81 aa4.65□□□□□ -1.67
UBE2D3-222ENST00000508238 FAM19A1Q7Z5A9 133 aa4.65□□□□□ -1.67
UBE2D3-222ENST00000508238 COPS9Q8WXC6 57 aa4.65□□□□□ -1.67
UBE2D3-222ENST00000508238 ANAPC11Q9NYG5 84 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms