RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MIFP14174 115 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 ELOF1P60002 83 aaKnown RBP3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 Q5XG85 94 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 SPATA3Q8NHX4 192 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 ESM1Q9NQ30 184 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 PRR34Q9NV39 138 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 DCHS2Q6V1P9 2916 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 MUC3AQ02505 3323 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 DMXL1Q9Y485 3027 aa3.36□□□□□ -1.87
HMGB3P16-201ENST00000508037 ATMQ13315 3056 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 M0R378 163 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 SPART-AS1P0CW21 52 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 EGFEM1PQ0D2K5 195 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 C9orf116Q5BN46 136 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 HRCT1Q6UXD1 115 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 UNQ6190/PRO20217Q6UXQ8 127 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 Q8N1X5 172 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 ZNF843Q8N446 348 aa3.35□□□□□ -1.87
HMGB3P16-201ENST00000508037 DCHS1Q96JQ0 3298 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 A0A096LPF7 62 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 F8WEM9 126 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 BPY2O14599 106 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 OXTP01178 125 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 KRTAP10-9P60411 292 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 NREPQ16612 68 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 C4orf26Q17RF5 130 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 SPG11Q96JI7 2443 aa3.34□□□□□ -1.87
HMGB3P16-201ENST00000508037 TRAV10A0A0B4J240 114 aa3.33□□□□□ -1.88
HMGB3P16-201ENST00000508037 H3BNG1 76 aa3.33□□□□□ -1.88
HMGB3P16-201ENST00000508037 C10orf25Q5T742 122 aa3.33□□□□□ -1.88
HMGB3P16-201ENST00000508037 CAMK2N2Q96S95 79 aa3.33□□□□□ -1.88
HMGB3P16-201ENST00000508037 C6orf48Q9UBA6 75 aa3.33□□□□□ -1.88
HMGB3P16-201ENST00000508037 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
HMGB3P16-201ENST00000508037 VPREB1P12018 145 aa3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 FUSP35637 526 aaKnown RBP eCLIP3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 Q8NDZ9 215 aa3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 WFDC11Q8NEX6 87 aa3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 TMEM254Q8TBM7 123 aa3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 RMI2Q96E14 147 aa3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 SNURFQ9Y675 71 aa3.32□□□□□ -1.88
HMGB3P16-201ENST00000508037 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 PRYO14603 147 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 DEFB135Q30KP9 77 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 Q8NAQ8 132 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 TM2D3Q9BRN9 247 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 DHRS4-AS1Q9P1J3 65 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 CELA1Q9UNI1 258 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 ASPMQ8IZT6 3477 aa3.31□□□□□ -1.88
HMGB3P16-201ENST00000508037 A0A0U1RQV1 116 aa3.3□□□□□ -1.88
HMGB3P16-201ENST00000508037 M0R2N4 97 aa3.3□□□□□ -1.88
HMGB3P16-201ENST00000508037 HTN3P15516 51 aa3.3□□□□□ -1.88
HMGB3P16-201ENST00000508037 NKAPP1Q8N9T2 125 aa3.3□□□□□ -1.88
HMGB3P16-201ENST00000508037 C2CD3Q4AC94 2353 aa3.3□□□□□ -1.88
HMGB3P16-201ENST00000508037 CSMD1Q96PZ7 3565 aa3.3□□□□□ -1.88
HMGB3P16-201ENST00000508037 ANKRD17O75179 2603 aaKnown RBP3.29□□□□□ -1.88
HMGB3P16-201ENST00000508037 IGKV4-1P06312 121 aa3.29□□□□□ -1.88
HMGB3P16-201ENST00000508037 KRTAP1-1Q07627 177 aa3.29□□□□□ -1.88
HMGB3P16-201ENST00000508037 SCXQ7RTU7 201 aa3.29□□□□□ -1.88
HMGB3P16-201ENST00000508037 C1orf43Q9BWL3 253 aa3.29□□□□□ -1.88
HMGB3P16-201ENST00000508037 OCR1Q9BZK8 76 aa3.29□□□□□ -1.88
HMGB3P16-201ENST00000508037 KCNQ1DNQ9H478 68 aa3.29□□□□□ -1.88
HMGB3P16-201ENST00000508037 IGLV5-48A0A075B6I7 105 aa3.28□□□□□ -1.88
HMGB3P16-201ENST00000508037 DEFB4AO15263 64 aa3.28□□□□□ -1.88
HMGB3P16-201ENST00000508037 PRB1P04280 392 aa3.28□□□□□ -1.88
HMGB3P16-201ENST00000508037 ESRGQ1W209 222 aa3.28□□□□□ -1.88
HMGB3P16-201ENST00000508037 KPRPQ5T749 579 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P16-201ENST00000508037 NOTCH3Q9UM47 2321 aa3.28□□□□□ -1.88
HMGB3P16-201ENST00000508037 USP9YO00507 2555 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P16-201ENST00000508037 LAMA5O15230 3695 aa3.27□□□□□ -1.89
HMGB3P16-201ENST00000508037 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
HMGB3P16-201ENST00000508037 Q6ZRU5 148 aa3.27□□□□□ -1.89
HMGB3P16-201ENST00000508037 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P16-201ENST00000508037 WNK1Q9H4A3 2382 aa3.27□□□□□ -1.89
HMGB3P16-201ENST00000508037 ACACBO00763 2458 aa3.27□□□□□ -1.89
HMGB3P16-201ENST00000508037 NAV2Q8IVL1 2488 aa3.27□□□□□ -1.89
HMGB3P16-201ENST00000508037 USP9XQ93008 2570 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 MYO9AB2RTY4 2548 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 PKD1L2Q7Z442 2459 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 IGLV5-37A0A075B6J1 123 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 ETDCA0A1B0GVM5 59 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 NDUFB1O75438 58 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 LINC01556Q5JQF7 62 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 LINC00336Q6ZUF6 198 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 Q8NBF4 154 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 NCOR2Q9Y618 2525 aa3.26□□□□□ -1.89
HMGB3P16-201ENST00000508037 LCE6AA0A183 80 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 C3orf84H3BNL1 204 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 KRTAP10-3P60369 221 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 C1orf137Q5JT78 98 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 KRTAP26-1Q6PEX3 210 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 Q6ZRX8 168 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 WFDC10BQ8IUB3 73 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 Q8N377 158 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 C7orf33Q8WU49 177 aa3.25□□□□□ -1.89
HMGB3P16-201ENST00000508037 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms