RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 FXYD2P54710 66 aa11.22□□□□□ -0.61
RNF4-209ENST00000507784 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
RNF4-209ENST00000507784 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
RNF4-209ENST00000507784 SDIM1Q6ZPB5 146 aa11.21□□□□□ -0.61
RNF4-209ENST00000507784 TMEM238LA0A1B0GVL6 79 aa11.2□□□□□ -0.62
RNF4-209ENST00000507784 A6NJY4 79 aa11.2□□□□□ -0.62
RNF4-209ENST00000507784 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
RNF4-209ENST00000507784 C9orf129Q5T035 196 aaKnown RBP11.2□□□□□ -0.62
RNF4-209ENST00000507784 DPH3Q96FX2 82 aa11.2□□□□□ -0.62
RNF4-209ENST00000507784 LOC107984156A0A0G2JMH3 177 aa11.19□□□□□ -0.62
RNF4-209ENST00000507784 ARL17AQ8IVW1 177 aa11.19□□□□□ -0.62
RNF4-209ENST00000507784 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
RNF4-209ENST00000507784 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
RNF4-209ENST00000507784 NHP2Q9NX24 153 aaKnown RBP11.17□□□□□ -0.62
RNF4-209ENST00000507784 NCR3O14931 201 aa11.16□□□□□ -0.62
RNF4-209ENST00000507784 PRR3P79522 188 aaKnown RBP11.16□□□□□ -0.62
RNF4-209ENST00000507784 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
RNF4-209ENST00000507784 KMT2CQ8NEZ4 4911 aaKnown RBP11.15□□□□□ -0.62
RNF4-209ENST00000507784 FAM168BA1KXE4 195 aa11.15□□□□□ -0.62
RNF4-209ENST00000507784 A6NDN8 102 aa11.15□□□□□ -0.62
RNF4-209ENST00000507784 Q8NDZ9 215 aa11.15□□□□□ -0.62
RNF4-209ENST00000507784 SNHG12Q9BXW3 62 aa11.15□□□□□ -0.62
RNF4-209ENST00000507784 NDUFC2O95298 119 aa11.14□□□□□ -0.63
RNF4-209ENST00000507784 CFC1BP0CG36 223 aa11.14□□□□□ -0.63
RNF4-209ENST00000507784 CFC1P0CG37 223 aa11.14□□□□□ -0.63
RNF4-209ENST00000507784 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
RNF4-209ENST00000507784 LINC00474Q9P2X8 69 aa11.14□□□□□ -0.63
RNF4-209ENST00000507784 VPREB1P12018 145 aa11.13□□□□□ -0.63
RNF4-209ENST00000507784 SERTAD4-AS1Q5TG53 156 aa11.13□□□□□ -0.63
RNF4-209ENST00000507784 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
RNF4-209ENST00000507784 OR13C6PQ8NH95 151 aa11.13□□□□□ -0.63
RNF4-209ENST00000507784 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
RNF4-209ENST00000507784 K7ERJ3 54 aa11.12□□□□□ -0.63
RNF4-209ENST00000507784 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
RNF4-209ENST00000507784 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.12□□□□□ -0.63
RNF4-209ENST00000507784 IGKV2-28A0A075B6P5 120 aa11.11□□□□□ -0.63
RNF4-209ENST00000507784 PANO1I0J062 215 aa11.11□□□□□ -0.63
RNF4-209ENST00000507784 IGKV2D-28P01615 120 aa11.11□□□□□ -0.63
RNF4-209ENST00000507784 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
RNF4-209ENST00000507784 A0A1W2PNN7 141 aa11.1□□□□□ -0.63
RNF4-209ENST00000507784 TRAV13-2A0A0B4J235 113 aa11.09□□□□□ -0.63
RNF4-209ENST00000507784 H7C2G1 150 aa11.09□□□□□ -0.63
RNF4-209ENST00000507784 M0R378 163 aa11.09□□□□□ -0.63
RNF4-209ENST00000507784 KRTAP10-1P60331 282 aa11.09□□□□□ -0.63
RNF4-209ENST00000507784 S100A7L2Q5SY68 101 aa11.09□□□□□ -0.63
RNF4-209ENST00000507784 SPACA4Q8TDM5 124 aa11.09□□□□□ -0.63
RNF4-209ENST00000507784 GAGE10A6NGK3 116 aa11.08□□□□□ -0.64
RNF4-209ENST00000507784 LINC00337Q8N6G1 96 aa11.08□□□□□ -0.64
RNF4-209ENST00000507784 PRO1854Q9UHT4 67 aa11.08□□□□□ -0.64
RNF4-209ENST00000507784 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
RNF4-209ENST00000507784 DNAH11Q96DT5 4516 aa11.07□□□□□ -0.64
RNF4-209ENST00000507784 TRBV10-2A0A0K0K1G8 114 aa11.07□□□□□ -0.64
RNF4-209ENST00000507784 A0A1B0GWB2 263 aa11.07□□□□□ -0.64
RNF4-209ENST00000507784 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
RNF4-209ENST00000507784 KRTAP7-1Q8IUC3 87 aa11.07□□□□□ -0.64
RNF4-209ENST00000507784 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
RNF4-209ENST00000507784 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
RNF4-209ENST00000507784 M0QXV9 152 aa11.06□□□□□ -0.64
RNF4-209ENST00000507784 Q1RN00 199 aa11.06□□□□□ -0.64
RNF4-209ENST00000507784 FAT2Q9NYQ8 4349 aa11.05□□□□□ -0.64
RNF4-209ENST00000507784 A0A087WYN8 130 aa11.05□□□□□ -0.64
RNF4-209ENST00000507784 COL5A1-AS1Q5SY13 56 aa11.05□□□□□ -0.64
RNF4-209ENST00000507784 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
RNF4-209ENST00000507784 MRPL55Q7Z7F7 128 aaKnown RBP11.04□□□□□ -0.64
RNF4-209ENST00000507784 FAM30AQ9NZY2 134 aa11.04□□□□□ -0.64
RNF4-209ENST00000507784 LBHQ53QV2 105 aaPredicted RBP11.03□□□□□ -0.64
RNF4-209ENST00000507784 PHF5AQ7RTV0 110 aaKnown RBP11.03□□□□□ -0.64
RNF4-209ENST00000507784 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
RNF4-209ENST00000507784 TMEM126AQ9H061 195 aa11.03□□□□□ -0.64
RNF4-209ENST00000507784 PKD1P98161 4303 aa11.02□□□□□ -0.64
RNF4-209ENST00000507784 TRBV10-3A0A0K0K1G6 114 aa11.02□□□□□ -0.65
RNF4-209ENST00000507784 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
RNF4-209ENST00000507784 RYR3Q15413 4870 aa11.02□□□□□ -0.65
RNF4-209ENST00000507784 UBE2BP63146 152 aa11□□□□□ -0.65
RNF4-209ENST00000507784 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
RNF4-209ENST00000507784 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
RNF4-209ENST00000507784 TSPAN13O95857 204 aa10.99□□□□□ -0.65
RNF4-209ENST00000507784 IGLV6-57P01721 117 aa10.99□□□□□ -0.65
RNF4-209ENST00000507784 PSMB2P49721 201 aa10.99□□□□□ -0.65
RNF4-209ENST00000507784 NAA38Q9BRA0 125 aaKnown RBP10.99□□□□□ -0.65
RNF4-209ENST00000507784 SMIM11BQ8TCY0 68 aa10.98□□□□□ -0.65
RNF4-209ENST00000507784 HAMPP81172 84 aa10.97□□□□□ -0.65
RNF4-209ENST00000507784 Q6ZSA8 131 aa10.97□□□□□ -0.65
RNF4-209ENST00000507784 CIRBP-AS1Q8TBR5 109 aa10.97□□□□□ -0.65
RNF4-209ENST00000507784 CBY1Q9Y3M2 126 aa10.97□□□□□ -0.65
RNF4-209ENST00000507784 DNAH5Q8TE73 4624 aa10.96□□□□□ -0.65
RNF4-209ENST00000507784 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.65
RNF4-209ENST00000507784 TRAV23DV6A0A075B6W5 121 aa10.96□□□□□ -0.65
RNF4-209ENST00000507784 SCXQ7RTU7 201 aa10.96□□□□□ -0.65
RNF4-209ENST00000507784 C9orf118A6NHY6 69 aa10.95□□□□□ -0.66
RNF4-209ENST00000507784 EPM2AB3EWF7 344 aa10.95□□□□□ -0.66
RNF4-209ENST00000507784 H3BUT2 72 aa10.95□□□□□ -0.66
RNF4-209ENST00000507784 PRYO14603 147 aa10.93□□□□□ -0.66
RNF4-209ENST00000507784 SCGB1C2P0DMR2 95 aa10.93□□□□□ -0.66
RNF4-209ENST00000507784 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
RNF4-209ENST00000507784 C6orf99Q4VX62 202 aa10.92□□□□□ -0.66
RNF4-209ENST00000507784 KCNQ1DNQ9H478 68 aa10.92□□□□□ -0.66
RNF4-209ENST00000507784 TRIAP1O43715 76 aa10.91□□□□□ -0.66
RNF4-209ENST00000507784 ZNF73O43830 326 aaPredicted RBP10.91□□□□□ -0.66
RNF4-209ENST00000507784 DIRC1Q969H9 104 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms