RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 PRR4Q16378 134 aa9.41□□□□□ -0.9
HOXC4-203ENST00000507650 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
HOXC4-203ENST00000507650 TRAV12-1A0A0B4J245 112 aa9.4□□□□□ -0.9
HOXC4-203ENST00000507650 CRYGAP11844 174 aa9.4□□□□□ -0.9
HOXC4-203ENST00000507650 UBE2AP49459 152 aa9.4□□□□□ -0.9
HOXC4-203ENST00000507650 LINC00310P59036 64 aa9.4□□□□□ -0.9
HOXC4-203ENST00000507650 IFI27L1Q96BM0 104 aa9.4□□□□□ -0.9
HOXC4-203ENST00000507650 NDUFA5Q16718 116 aa9.39□□□□□ -0.91
HOXC4-203ENST00000507650 FAM19A2Q8N3H0 131 aa9.39□□□□□ -0.91
HOXC4-203ENST00000507650 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
HOXC4-203ENST00000507650 TYMSOSQ8TAI1 123 aa9.38□□□□□ -0.91
HOXC4-203ENST00000507650 A0A0U1RRA0 63 aa9.37□□□□□ -0.91
HOXC4-203ENST00000507650 FAM229BQ4G0N7 80 aa9.36□□□□□ -0.91
HOXC4-203ENST00000507650 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
HOXC4-203ENST00000507650 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
HOXC4-203ENST00000507650 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
HOXC4-203ENST00000507650 LINC00158P58513 81 aa9.34□□□□□ -0.91
HOXC4-203ENST00000507650 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
HOXC4-203ENST00000507650 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
HOXC4-203ENST00000507650 PLEKHB2Q96CS7 222 aa9.34□□□□□ -0.91
HOXC4-203ENST00000507650 TRGC2P03986 189 aa9.33□□□□□ -0.92
HOXC4-203ENST00000507650 C3orf22Q8N5N4 141 aa9.32□□□□□ -0.92
HOXC4-203ENST00000507650 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
HOXC4-203ENST00000507650 HSBP1O75506 76 aa9.31□□□□□ -0.92
HOXC4-203ENST00000507650 SERF1AO75920 110 aa9.31□□□□□ -0.92
HOXC4-203ENST00000507650 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
HOXC4-203ENST00000507650 KRTAP4-16G5E9R7 235 aaPredicted RBP9.29□□□□□ -0.92
HOXC4-203ENST00000507650 H0Y8G0 127 aa9.29□□□□□ -0.92
HOXC4-203ENST00000507650 NCR3O14931 201 aa9.29□□□□□ -0.92
HOXC4-203ENST00000507650 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
HOXC4-203ENST00000507650 HIGD2AQ9BW72 106 aa9.29□□□□□ -0.92
HOXC4-203ENST00000507650 MUC17Q685J3 4493 aa9.29□□□□□ -0.92
HOXC4-203ENST00000507650 SPRR1AP35321 89 aa9.28□□□□□ -0.92
HOXC4-203ENST00000507650 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
HOXC4-203ENST00000507650 SLC7A5P1Q8MH63 180 aa9.28□□□□□ -0.92
HOXC4-203ENST00000507650 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
HOXC4-203ENST00000507650 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.93
HOXC4-203ENST00000507650 SPRR4Q96PI1 79 aa9.27□□□□□ -0.93
HOXC4-203ENST00000507650 IGKV2D-26A0A0A0MRZ7 120 aa9.26□□□□□ -0.93
HOXC4-203ENST00000507650 DAND5Q8N907 189 aa9.26□□□□□ -0.93
HOXC4-203ENST00000507650 PMCHL2Q9BQD1 86 aa9.26□□□□□ -0.93
HOXC4-203ENST00000507650 COLCA2A8K830 154 aa9.25□□□□□ -0.93
HOXC4-203ENST00000507650 PRYO14603 147 aa9.25□□□□□ -0.93
HOXC4-203ENST00000507650 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
HOXC4-203ENST00000507650 HERV-K104P63124 156 aa9.25□□□□□ -0.93
HOXC4-203ENST00000507650 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
HOXC4-203ENST00000507650 TRBV10-3A0A0K0K1G6 114 aa9.24□□□□□ -0.93
HOXC4-203ENST00000507650 LEPROTO15243 131 aa9.24□□□□□ -0.93
HOXC4-203ENST00000507650 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
HOXC4-203ENST00000507650 FAT4Q6V0I7 4981 aa9.22□□□□□ -0.93
HOXC4-203ENST00000507650 LOC107984156A0A0G2JMH3 177 aa9.22□□□□□ -0.93
HOXC4-203ENST00000507650 MYMXA0A1B0GTQ4 84 aa9.22□□□□□ -0.93
HOXC4-203ENST00000507650 EIF4EBP3O60516 100 aaPredicted RBP9.22□□□□□ -0.93
HOXC4-203ENST00000507650 FABP4P15090 132 aa9.22□□□□□ -0.93
HOXC4-203ENST00000507650 ARL17AQ8IVW1 177 aa9.22□□□□□ -0.93
HOXC4-203ENST00000507650 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
HOXC4-203ENST00000507650 J3QQQ9 107 aa9.2□□□□□ -0.94
HOXC4-203ENST00000507650 ATP6V1G1O75348 118 aa9.2□□□□□ -0.94
HOXC4-203ENST00000507650 PLNP26678 52 aa9.2□□□□□ -0.94
HOXC4-203ENST00000507650 ERC2-IT1O76042 136 aa9.19□□□□□ -0.94
HOXC4-203ENST00000507650 SOSTDC1Q6X4U4 206 aa9.19□□□□□ -0.94
HOXC4-203ENST00000507650 B5MCH6 92 aa9.18□□□□□ -0.94
HOXC4-203ENST00000507650 DPM2O94777 84 aa9.18□□□□□ -0.94
HOXC4-203ENST00000507650 PPDPFQ9H3Y8 114 aa9.18□□□□□ -0.94
HOXC4-203ENST00000507650 IGKCP01834 107 aa9.17□□□□□ -0.94
HOXC4-203ENST00000507650 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
HOXC4-203ENST00000507650 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
HOXC4-203ENST00000507650 Q9BRP9 147 aa9.17□□□□□ -0.94
HOXC4-203ENST00000507650 HSPB8Q9UJY1 196 aa9.17□□□□□ -0.94
HOXC4-203ENST00000507650 IGLV7-46A0A075B6I9 117 aa9.16□□□□□ -0.94
HOXC4-203ENST00000507650 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
HOXC4-203ENST00000507650 ADAMTSL4-AS1Q5T5F5 129 aa9.16□□□□□ -0.94
HOXC4-203ENST00000507650 ETDCA0A1B0GVM5 59 aa9.15□□□□□ -0.94
HOXC4-203ENST00000507650 CTAG1AP78358 180 aa9.15□□□□□ -0.94
HOXC4-203ENST00000507650 Q8NBF4 154 aa9.15□□□□□ -0.94
HOXC4-203ENST00000507650 MAP1LC3CQ9BXW4 147 aa9.15□□□□□ -0.94
HOXC4-203ENST00000507650 TRBV10-2A0A0K0K1G8 114 aa9.14□□□□□ -0.95
HOXC4-203ENST00000507650 DDTP30046 118 aa9.14□□□□□ -0.95
HOXC4-203ENST00000507650 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
HOXC4-203ENST00000507650 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
HOXC4-203ENST00000507650 IGLV6-57P01721 117 aa9.13□□□□□ -0.95
HOXC4-203ENST00000507650 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
HOXC4-203ENST00000507650 NMUP48645 174 aa9.13□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HERVK_113P61574 105 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 NPC2P61916 151 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 LITAFQ99732 161 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
HOXC4-203ENST00000507650 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
HOXC4-203ENST00000507650 E9PLD3 99 aa9.11□□□□□ -0.95
HOXC4-203ENST00000507650 GAGE2AQ6NT46 116 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms