RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 SEC11AP67812 179 aa5.94□□□□□ -1.46
PDGFRA-205ENST00000507536 PNRC1Q12796 327 aaPredicted RBP5.94□□□□□ -1.46
PDGFRA-205ENST00000507536 FAM229BQ4G0N7 80 aa5.94□□□□□ -1.46
PDGFRA-205ENST00000507536 GEMIN7Q9H840 131 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-205ENST00000507536 NXT2Q9NPJ8 142 aaKnown RBP5.94□□□□□ -1.46
PDGFRA-205ENST00000507536 ADCYAP1P18509 176 aa5.93□□□□□ -1.46
PDGFRA-205ENST00000507536 S100PP25815 95 aa5.93□□□□□ -1.46
PDGFRA-205ENST00000507536 UQCC3Q6UW78 93 aa5.93□□□□□ -1.46
PDGFRA-205ENST00000507536 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
PDGFRA-205ENST00000507536 COX7B2Q8TF08 81 aa5.93□□□□□ -1.46
PDGFRA-205ENST00000507536 TINCRA0A1B0GVN0 87 aa5.92□□□□□ -1.46
PDGFRA-205ENST00000507536 TRIAP1O43715 76 aa5.92□□□□□ -1.46
PDGFRA-205ENST00000507536 PDZD11Q5EBL8 140 aa5.92□□□□□ -1.46
PDGFRA-205ENST00000507536 ERASQ7Z444 233 aa5.92□□□□□ -1.46
PDGFRA-205ENST00000507536 IGKV2-28A0A075B6P5 120 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 IGKV2D-28P01615 120 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 APOC3P02656 99 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 SPINK8P0C7L1 97 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 UBE2AP49459 152 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 PRLHP81277 87 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 PAPPA-AS1Q5QFB9 102 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 Q8NDZ9 215 aa5.91□□□□□ -1.46
PDGFRA-205ENST00000507536 TMEM238C9JI98 176 aa5.9□□□□□ -1.46
PDGFRA-205ENST00000507536 VPREB1P12018 145 aa5.9□□□□□ -1.46
PDGFRA-205ENST00000507536 RAB5BP61020 215 aa5.9□□□□□ -1.46
PDGFRA-205ENST00000507536 KIAA1644Q3SXP7 199 aa5.9□□□□□ -1.46
PDGFRA-205ENST00000507536 SVBPQ8N300 66 aa5.9□□□□□ -1.46
PDGFRA-205ENST00000507536 NKAPP1Q8N9T2 125 aa5.9□□□□□ -1.46
PDGFRA-205ENST00000507536 CST9LQ9H4G1 147 aa5.9□□□□□ -1.46
PDGFRA-205ENST00000507536 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
PDGFRA-205ENST00000507536 LINC01546A6NGU7 62 aa5.89□□□□□ -1.47
PDGFRA-205ENST00000507536 MT-ND4LP03901 98 aa5.89□□□□□ -1.47
PDGFRA-205ENST00000507536 C3orf22Q8N5N4 141 aa5.89□□□□□ -1.47
PDGFRA-205ENST00000507536 SCGB3A1Q96QR1 104 aa5.89□□□□□ -1.47
PDGFRA-205ENST00000507536 IGLV5-39A0A0G2JS06 123 aa5.88□□□□□ -1.47
PDGFRA-205ENST00000507536 TMEM126AQ9H061 195 aa5.88□□□□□ -1.47
PDGFRA-205ENST00000507536 IGKV2D-26A0A0A0MRZ7 120 aa5.87□□□□□ -1.47
PDGFRA-205ENST00000507536 LINC00587B1AMM8 73 aa5.87□□□□□ -1.47
PDGFRA-205ENST00000507536 M0R378 163 aa5.87□□□□□ -1.47
PDGFRA-205ENST00000507536 G0S2P27469 103 aa5.87□□□□□ -1.47
PDGFRA-205ENST00000507536 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
PDGFRA-205ENST00000507536 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
PDGFRA-205ENST00000507536 FAM19A1Q7Z5A9 133 aa5.86□□□□□ -1.47
PDGFRA-205ENST00000507536 PPDPFQ9H3Y8 114 aa5.86□□□□□ -1.47
PDGFRA-205ENST00000507536 ATP5LO75964 103 aa5.85□□□□□ -1.47
PDGFRA-205ENST00000507536 IGLC3P0DOY3 106 aa5.85□□□□□ -1.47
PDGFRA-205ENST00000507536 PFN2P35080 140 aa5.85□□□□□ -1.47
PDGFRA-205ENST00000507536 PMVKQ15126 192 aa5.85□□□□□ -1.47
PDGFRA-205ENST00000507536 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
PDGFRA-205ENST00000507536 A0A096LNJ9 63 aa5.84□□□□□ -1.47
PDGFRA-205ENST00000507536 TMEM218A2RU14 115 aa5.84□□□□□ -1.47
PDGFRA-205ENST00000507536 ZNF22P17026 224 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-205ENST00000507536 ERG28Q9UKR5 140 aa5.84□□□□□ -1.47
PDGFRA-205ENST00000507536 KRTAP13-3Q3SY46 172 aa5.83□□□□□ -1.48
PDGFRA-205ENST00000507536 C10orf91Q5T1B1 145 aa5.83□□□□□ -1.48
PDGFRA-205ENST00000507536 LINC01549A6NIU2 74 aa5.82□□□□□ -1.48
PDGFRA-205ENST00000507536 H3BRM9 83 aa5.82□□□□□ -1.48
PDGFRA-205ENST00000507536 CBLN2Q8IUK8 224 aa5.82□□□□□ -1.48
PDGFRA-205ENST00000507536 SPRR4Q96PI1 79 aa5.82□□□□□ -1.48
PDGFRA-205ENST00000507536 SEC11CQ9BY50 192 aa5.82□□□□□ -1.48
PDGFRA-205ENST00000507536 SMCO4Q9NRQ5 59 aa5.82□□□□□ -1.48
PDGFRA-205ENST00000507536 TRAV9-1A0A075B6T8 112 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 C5orf52A6NGY3 159 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 COX17Q14061 63 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 FP248Q71RG6 208 aaPredicted RBP5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 URB1-AS1Q96HZ7 61 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 ZNF625Q96I27 306 aaPredicted RBP5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 HIGD2AQ9BW72 106 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 GNB1LQ9BYB4 327 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 CBY1Q9Y3M2 126 aa5.81□□□□□ -1.48
PDGFRA-205ENST00000507536 SNRPEP62304 92 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-205ENST00000507536 SPAG11AQ6PDA7 123 aa5.8□□□□□ -1.48
PDGFRA-205ENST00000507536 CHTOPQ9Y3Y2 248 aaKnown RBP5.8□□□□□ -1.48
PDGFRA-205ENST00000507536 C11orf86A6NJI1 115 aa5.79□□□□□ -1.48
PDGFRA-205ENST00000507536 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
PDGFRA-205ENST00000507536 KRTAP4-16G5E9R7 235 aaPredicted RBP5.78□□□□□ -1.48
PDGFRA-205ENST00000507536 FA2HQ7L5A8 372 aa5.78□□□□□ -1.48
PDGFRA-205ENST00000507536 DAND5Q8N907 189 aa5.78□□□□□ -1.48
PDGFRA-205ENST00000507536 Q8NBF4 154 aa5.78□□□□□ -1.48
PDGFRA-205ENST00000507536 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
PDGFRA-205ENST00000507536 S100A2P29034 98 aa5.77□□□□□ -1.49
PDGFRA-205ENST00000507536 SPRR1AP35321 89 aa5.77□□□□□ -1.49
PDGFRA-205ENST00000507536 FABP9Q0Z7S8 132 aa5.77□□□□□ -1.49
PDGFRA-205ENST00000507536 COLCA2A8K830 154 aa5.76□□□□□ -1.49
PDGFRA-205ENST00000507536 TSTD3H0UI37 97 aa5.76□□□□□ -1.49
PDGFRA-205ENST00000507536 NDUFA6P56556 154 aa5.76□□□□□ -1.49
PDGFRA-205ENST00000507536 PMCHL1Q16048 86 aa5.76□□□□□ -1.49
PDGFRA-205ENST00000507536 PRYO14603 147 aa5.75□□□□□ -1.49
PDGFRA-205ENST00000507536 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
PDGFRA-205ENST00000507536 C18orf32Q8TCD1 76 aa5.75□□□□□ -1.49
PDGFRA-205ENST00000507536 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
PDGFRA-205ENST00000507536 HBDP02042 147 aa5.74□□□□□ -1.49
PDGFRA-205ENST00000507536 SFTA2Q6UW10 78 aa5.74□□□□□ -1.49
PDGFRA-205ENST00000507536 LINC00337Q8N6G1 96 aa5.74□□□□□ -1.49
PDGFRA-205ENST00000507536 KCNQ1DNQ9H478 68 aa5.74□□□□□ -1.49
PDGFRA-205ENST00000507536 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
PDGFRA-205ENST00000507536 A0A0U1RRA0 63 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 SPINK1P00995 79 aa5.73□□□□□ -1.49
PDGFRA-205ENST00000507536 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms