RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 HIST1H2BOP23527 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST1H2BBP33778 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST1H2BDP58876 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST1H2BCP62807 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST2H2BEQ16778 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 PRR26Q8N8Z3 221 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST1H2BHQ93079 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST1H2BNQ99877 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 HIST1H2BMQ99879 126 aa8.54□□□□□ -1.04
CCHCR1-222ENST00000507459 DPM2O94777 84 aa8.53□□□□□ -1.04
CCHCR1-222ENST00000507459 SMIM13P0DJ93 91 aa8.53□□□□□ -1.04
CCHCR1-222ENST00000507459 PLNP26678 52 aa8.53□□□□□ -1.04
CCHCR1-222ENST00000507459 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
CCHCR1-222ENST00000507459 NDUFA12Q9UI09 145 aa8.53□□□□□ -1.04
CCHCR1-222ENST00000507459 Q8NDZ9 215 aa8.52□□□□□ -1.05
CCHCR1-222ENST00000507459 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
CCHCR1-222ENST00000507459 LEPROTO15243 131 aa8.51□□□□□ -1.05
CCHCR1-222ENST00000507459 IGKCP01834 107 aa8.51□□□□□ -1.05
CCHCR1-222ENST00000507459 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
CCHCR1-222ENST00000507459 HERV-K104P63124 156 aa8.51□□□□□ -1.05
CCHCR1-222ENST00000507459 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
CCHCR1-222ENST00000507459 TSPEAR-AS2P59090 65 aa8.5□□□□□ -1.05
CCHCR1-222ENST00000507459 HERVK_113P61574 105 aa8.5□□□□□ -1.05
CCHCR1-222ENST00000507459 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
CCHCR1-222ENST00000507459 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
CCHCR1-222ENST00000507459 UBE2AP49459 152 aa8.49□□□□□ -1.05
CCHCR1-222ENST00000507459 MIR7-3HGQ8N6C7 128 aa8.49□□□□□ -1.05
CCHCR1-222ENST00000507459 LINC00587B1AMM8 73 aa8.48□□□□□ -1.05
CCHCR1-222ENST00000507459 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
CCHCR1-222ENST00000507459 J3QQQ9 107 aa8.48□□□□□ -1.05
CCHCR1-222ENST00000507459 SYS1-DBNDD2H3BUS1 97 aa8.47□□□□□ -1.05
CCHCR1-222ENST00000507459 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
CCHCR1-222ENST00000507459 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
CCHCR1-222ENST00000507459 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
CCHCR1-222ENST00000507459 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
CCHCR1-222ENST00000507459 M0R378 163 aa8.45□□□□□ -1.06
CCHCR1-222ENST00000507459 PRLHP81277 87 aa8.45□□□□□ -1.06
CCHCR1-222ENST00000507459 DAND5Q8N907 189 aa8.45□□□□□ -1.06
CCHCR1-222ENST00000507459 NCR3O14931 201 aa8.44□□□□□ -1.06
CCHCR1-222ENST00000507459 NMUP48645 174 aa8.44□□□□□ -1.06
CCHCR1-222ENST00000507459 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
CCHCR1-222ENST00000507459 RPL13AP40429 203 aaKnown RBP8.43□□□□□ -1.06
CCHCR1-222ENST00000507459 PET117Q6UWS5 81 aa8.42□□□□□ -1.06
CCHCR1-222ENST00000507459 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
CCHCR1-222ENST00000507459 E9PLD3 99 aa8.41□□□□□ -1.06
CCHCR1-222ENST00000507459 LINC01545Q5VT33 79 aa8.41□□□□□ -1.06
CCHCR1-222ENST00000507459 C3orf79P0CE67 100 aa8.4□□□□□ -1.06
CCHCR1-222ENST00000507459 KRTDAPP60985 99 aa8.4□□□□□ -1.06
CCHCR1-222ENST00000507459 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.06
CCHCR1-222ENST00000507459 A0A087X002 238 aa8.39□□□□□ -1.07
CCHCR1-222ENST00000507459 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
CCHCR1-222ENST00000507459 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
CCHCR1-222ENST00000507459 CRYGAP11844 174 aa8.39□□□□□ -1.07
CCHCR1-222ENST00000507459 MIEN1Q9BRT3 115 aa8.39□□□□□ -1.07
CCHCR1-222ENST00000507459 TRBV10-3A0A0K0K1G6 114 aa8.38□□□□□ -1.07
CCHCR1-222ENST00000507459 NPC2P61916 151 aa8.38□□□□□ -1.07
CCHCR1-222ENST00000507459 HIGD2AQ9BW72 106 aa8.38□□□□□ -1.07
CCHCR1-222ENST00000507459 PRYO14603 147 aa8.37□□□□□ -1.07
CCHCR1-222ENST00000507459 LOC107984156A0A0G2JMH3 177 aa8.36□□□□□ -1.07
CCHCR1-222ENST00000507459 S100A1P23297 94 aa8.36□□□□□ -1.07
CCHCR1-222ENST00000507459 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
CCHCR1-222ENST00000507459 ARL17AQ8IVW1 177 aa8.36□□□□□ -1.07
CCHCR1-222ENST00000507459 TYMSOSQ8TAI1 123 aa8.36□□□□□ -1.07
CCHCR1-222ENST00000507459 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
CCHCR1-222ENST00000507459 LRP2P98164 4655 aa8.36□□□□□ -1.07
CCHCR1-222ENST00000507459 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
CCHCR1-222ENST00000507459 S100A12P80511 92 aa8.35□□□□□ -1.07
CCHCR1-222ENST00000507459 ETDCA0A1B0GVM5 59 aa8.34□□□□□ -1.07
CCHCR1-222ENST00000507459 TSPAN13O95857 204 aa8.34□□□□□ -1.07
CCHCR1-222ENST00000507459 DDTP30046 118 aa8.34□□□□□ -1.07
CCHCR1-222ENST00000507459 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
CCHCR1-222ENST00000507459 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
CCHCR1-222ENST00000507459 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 C20orf202A1L168 122 aa8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 ZNF815PA8K554 130 aa8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 EIF4EBP3O60516 100 aaPredicted RBP8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 FAM229BQ4G0N7 80 aa8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
CCHCR1-222ENST00000507459 NDUFC2O95298 119 aa8.32□□□□□ -1.08
CCHCR1-222ENST00000507459 SPRR1AP35321 89 aa8.32□□□□□ -1.08
CCHCR1-222ENST00000507459 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
CCHCR1-222ENST00000507459 KRTAP4-16G5E9R7 235 aaPredicted RBP8.3□□□□□ -1.08
CCHCR1-222ENST00000507459 SMCR5Q8TEV8 140 aa8.3□□□□□ -1.08
CCHCR1-222ENST00000507459 LITAFQ99732 161 aa8.3□□□□□ -1.08
CCHCR1-222ENST00000507459 TIMM17BO60830 172 aa8.29□□□□□ -1.08
CCHCR1-222ENST00000507459 ANKRD39Q53RE8 183 aa8.29□□□□□ -1.08
CCHCR1-222ENST00000507459 LINC00308Q8TCZ7 52 aa8.29□□□□□ -1.08
CCHCR1-222ENST00000507459 SPRR4Q96PI1 79 aa8.29□□□□□ -1.08
CCHCR1-222ENST00000507459 B5MCH6 92 aa8.28□□□□□ -1.08
CCHCR1-222ENST00000507459 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
CCHCR1-222ENST00000507459 S100A2P29034 98 aa8.28□□□□□ -1.08
CCHCR1-222ENST00000507459 PRR4Q16378 134 aa8.28□□□□□ -1.08
CCHCR1-222ENST00000507459 ZNF706Q9Y5V0 76 aaPredicted RBP8.28□□□□□ -1.08
CCHCR1-222ENST00000507459 LPAP08519 4548 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms