RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 C9orf163Q8N9P6 203 aa5□□□□□ -1.61
SMAD1-206ENST00000507367 PGPEP1Q9NXJ5 209 aa5□□□□□ -1.61
SMAD1-206ENST00000507367 TRAV13-2A0A0B4J235 113 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 LOC107984156A0A0G2JMH3 177 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 A4D1N5 150 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 C16orf90A8MZG2 172 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 NDUFC2O95298 119 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 GAGE2BQ13066 116 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 Q6ZRP5 223 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 ARL17AQ8IVW1 177 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 XAGE1AQ9HD64 81 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 NHP2Q9NX24 153 aaKnown RBP4.99□□□□□ -1.61
SMAD1-206ENST00000507367 CBY1Q9Y3M2 126 aa4.99□□□□□ -1.61
SMAD1-206ENST00000507367 FXYD2P54710 66 aa4.98□□□□□ -1.61
SMAD1-206ENST00000507367 LBHQ53QV2 105 aaPredicted RBP4.98□□□□□ -1.61
SMAD1-206ENST00000507367 COL5A1-AS1Q5SY13 56 aa4.98□□□□□ -1.61
SMAD1-206ENST00000507367 NKAPP1Q8N9T2 125 aa4.98□□□□□ -1.61
SMAD1-206ENST00000507367 FAT2Q9NYQ8 4349 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 A0A0B4J2C4 111 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 IGKV2-24A0A0C4DH68 120 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 S100A7L2Q5SY68 101 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 SOSTDC1Q6X4U4 206 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 DPH3Q96FX2 82 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 SNHG12Q9BXW3 62 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 PRO1854Q9UHT4 67 aa4.97□□□□□ -1.61
SMAD1-206ENST00000507367 DNAH11Q96DT5 4516 aa4.96□□□□□ -1.61
SMAD1-206ENST00000507367 TRBV10-2A0A0K0K1G8 114 aa4.96□□□□□ -1.62
SMAD1-206ENST00000507367 CFC1BP0CG36 223 aa4.96□□□□□ -1.62
SMAD1-206ENST00000507367 CFC1P0CG37 223 aa4.96□□□□□ -1.62
SMAD1-206ENST00000507367 Q1RN00 199 aa4.96□□□□□ -1.62
SMAD1-206ENST00000507367 OR13C6PQ8NH95 151 aa4.96□□□□□ -1.62
SMAD1-206ENST00000507367 PLA2G2DQ9UNK4 145 aa4.96□□□□□ -1.62
SMAD1-206ENST00000507367 A0A096LNI7 61 aa4.95□□□□□ -1.62
SMAD1-206ENST00000507367 A0A1B0GWB2 263 aa4.95□□□□□ -1.62
SMAD1-206ENST00000507367 M0R378 163 aa4.95□□□□□ -1.62
SMAD1-206ENST00000507367 C9orf129Q5T035 196 aaKnown RBP4.95□□□□□ -1.62
SMAD1-206ENST00000507367 SDIM1Q6ZPB5 146 aa4.95□□□□□ -1.62
SMAD1-206ENST00000507367 TMEM126AQ9H061 195 aa4.95□□□□□ -1.62
SMAD1-206ENST00000507367 K7ERJ3 54 aa4.94□□□□□ -1.62
SMAD1-206ENST00000507367 NCR3O14931 201 aa4.94□□□□□ -1.62
SMAD1-206ENST00000507367 EIF4EBP3O60516 100 aaPredicted RBP4.94□□□□□ -1.62
SMAD1-206ENST00000507367 RPL13AP40429 203 aaKnown RBP4.94□□□□□ -1.62
SMAD1-206ENST00000507367 PKD1P98161 4303 aa4.94□□□□□ -1.62
SMAD1-206ENST00000507367 IGLV5-37A0A075B6J1 123 aa4.93□□□□□ -1.62
SMAD1-206ENST00000507367 H7C2G1 150 aa4.93□□□□□ -1.62
SMAD1-206ENST00000507367 COX6CP09669 75 aa4.93□□□□□ -1.62
SMAD1-206ENST00000507367 VPREB1P12018 145 aa4.93□□□□□ -1.62
SMAD1-206ENST00000507367 PSMB2P49721 201 aa4.93□□□□□ -1.62
SMAD1-206ENST00000507367 LINC01620Q4KN68 170 aa4.93□□□□□ -1.62
SMAD1-206ENST00000507367 LYRM7Q5U5X0 104 aa4.93□□□□□ -1.62
SMAD1-206ENST00000507367 FAM19A5Q7Z5A7 132 aaPredicted RBP4.93□□□□□ -1.62
SMAD1-206ENST00000507367 RYR3Q15413 4870 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 IGKV2-28A0A075B6P5 120 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 M0QXV9 152 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 IGKV2D-28P01615 120 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 KRTAP10-2P60368 255 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 VAMP3Q15836 100 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 MRPL55Q7Z7F7 128 aaKnown RBP4.92□□□□□ -1.62
SMAD1-206ENST00000507367 SPACA4Q8TDM5 124 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 DNAH5Q8TE73 4624 aa4.92□□□□□ -1.62
SMAD1-206ENST00000507367 C9orf118A6NHY6 69 aa4.91□□□□□ -1.62
SMAD1-206ENST00000507367 CHTF8P0CG12 524 aa4.91□□□□□ -1.62
SMAD1-206ENST00000507367 SCGB1C2P0DMR2 95 aa4.91□□□□□ -1.62
SMAD1-206ENST00000507367 PRR3P79522 188 aaKnown RBP4.91□□□□□ -1.62
SMAD1-206ENST00000507367 SERTAD4-AS1Q5TG53 156 aa4.91□□□□□ -1.62
SMAD1-206ENST00000507367 LINC00337Q8N6G1 96 aa4.91□□□□□ -1.62
SMAD1-206ENST00000507367 C22orf24Q9Y442 160 aa4.91□□□□□ -1.62
SMAD1-206ENST00000507367 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.63
SMAD1-206ENST00000507367 FAM168BA1KXE4 195 aa4.9□□□□□ -1.63
SMAD1-206ENST00000507367 SNCGO76070 127 aa4.9□□□□□ -1.63
SMAD1-206ENST00000507367 TSPAN13O95857 204 aa4.9□□□□□ -1.63
SMAD1-206ENST00000507367 IGLV6-57P01721 117 aa4.9□□□□□ -1.63
SMAD1-206ENST00000507367 FUSP35637 526 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMAD1-206ENST00000507367 UBE2BP63146 152 aa4.9□□□□□ -1.63
SMAD1-206ENST00000507367 TRBV10-3A0A0K0K1G6 114 aa4.89□□□□□ -1.63
SMAD1-206ENST00000507367 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
SMAD1-206ENST00000507367 H3BUT2 72 aa4.89□□□□□ -1.63
SMAD1-206ENST00000507367 TAX1BP3O14907 124 aa4.89□□□□□ -1.63
SMAD1-206ENST00000507367 FABP2P12104 132 aa4.89□□□□□ -1.63
SMAD1-206ENST00000507367 RPL28P46779 137 aaKnown RBP4.89□□□□□ -1.63
SMAD1-206ENST00000507367 Q8NDZ9 215 aa4.89□□□□□ -1.63
SMAD1-206ENST00000507367 C7orf33Q8WU49 177 aa4.89□□□□□ -1.63
SMAD1-206ENST00000507367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.89□□□□□ -1.63
SMAD1-206ENST00000507367 PKHD1P08F94 4074 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 A0A087WYN8 130 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 A0A1W2PNN7 141 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 RPL37AP8A6NKH3 93 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 H0YGX0 51 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 PRYO14603 147 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 SMIM11BQ8TCY0 68 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 DIRC1Q969H9 104 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 LINC00167Q96N53 147 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 PLAC8Q9NZF1 115 aa4.88□□□□□ -1.63
SMAD1-206ENST00000507367 IGLV1-50A0A075B6I6 118 aa4.87□□□□□ -1.63
SMAD1-206ENST00000507367 TRBV7-6A0A0J9YX20 115 aa4.87□□□□□ -1.63
SMAD1-206ENST00000507367 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
SMAD1-206ENST00000507367 A0A1W2PPM0 123 aa4.87□□□□□ -1.63
SMAD1-206ENST00000507367 ZNF73O43830 326 aaPredicted RBP4.87□□□□□ -1.63
SMAD1-206ENST00000507367 KCNQ1DNQ9H478 68 aa4.87□□□□□ -1.63
SMAD1-206ENST00000507367 DNAH8Q96JB1 4490 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms