RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 NCR3O14931 201 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 IGLV3-19P01714 112 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 IFI6P09912 130 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 TPRXLQ17RH7 258 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 PP632Q6XCG6 107 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 SPRR4Q96PI1 79 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 GAFA1Q96PS6 74 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 BPTFQ12830 3046 aa1.96□□□□□ -2.1
HMGB3P15-201ENST00000507326 SDK1Q7Z5N4 2213 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 TRGV2A0A075B6R0 118 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 TRGV1A0A0A0MS02 117 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 NBDYA0A0U1RRE5 68 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 LRCOL1A6NCL2 159 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 DEFB112Q30KQ8 113 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 SPACA4Q8TDM5 124 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 ABRACLQ9P1F3 81 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 HTTP42858 3142 aa1.95□□□□□ -2.1
HMGB3P15-201ENST00000507326 BRCA2P51587 3418 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 MED13LQ71F56 2210 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 TRAV21A0A0B4J279 112 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 C10orf142B7Z368 130 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 K7EMI3 77 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 PIN1P1O15428 100 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 IGKV4-1P06312 121 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 PLNP26678 52 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 RPS27LQ71UM5 84 aaKnown RBP1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 ZNF625Q96I27 306 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 Q9Y3F1 56 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 CACNA1CQ13936 2221 aa1.94□□□□□ -2.1
HMGB3P15-201ENST00000507326 A0A087WTM6 91 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 A0A1B0GU69 56 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 CCL22O00626 93 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 MRPL33O75394 65 aaKnown RBP1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 SPINK13Q1W4C9 94 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 C10orf99Q6UWK7 81 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 SMIM11BQ8TCY0 68 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 PLAC8Q9NZF1 115 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 TNCP24821 2201 aa1.92□□□□□ -2.1
HMGB3P15-201ENST00000507326 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
HMGB3P15-201ENST00000507326 KRTAP13-2Q52LG2 175 aa1.91□□□□□ -2.1
HMGB3P15-201ENST00000507326 ENHOQ6UWT2 76 aa1.91□□□□□ -2.1
HMGB3P15-201ENST00000507326 CD52P31358 61 aa1.9□□□□□ -2.11
HMGB3P15-201ENST00000507326 DEFB114Q30KQ6 69 aa1.9□□□□□ -2.11
HMGB3P15-201ENST00000507326 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
HMGB3P15-201ENST00000507326 Q96NJ1 140 aa1.9□□□□□ -2.11
HMGB3P15-201ENST00000507326 CCL19Q99731 98 aa1.9□□□□□ -2.11
HMGB3P15-201ENST00000507326 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
HMGB3P15-201ENST00000507326 CENPFP49454 3210 aa1.89□□□□□ -2.11
HMGB3P15-201ENST00000507326 LCE6AA0A183 80 aa1.89□□□□□ -2.11
HMGB3P15-201ENST00000507326 KMT2BQ9UMN6 2715 aaPredicted RBP1.89□□□□□ -2.11
HMGB3P15-201ENST00000507326 CEP350Q5VT06 3117 aa1.88□□□□□ -2.11
HMGB3P15-201ENST00000507326 J3QRE1 110 aa1.88□□□□□ -2.11
HMGB3P15-201ENST00000507326 FXYD6P3P58550 94 aa1.88□□□□□ -2.11
HMGB3P15-201ENST00000507326 HAMPP81172 84 aa1.88□□□□□ -2.11
HMGB3P15-201ENST00000507326 LINC00575Q6W349 94 aa1.88□□□□□ -2.11
HMGB3P15-201ENST00000507326 ASCC3Q8N3C0 2202 aaKnown RBP1.88□□□□□ -2.11
HMGB3P15-201ENST00000507326 LOC730098B7Z3J9 87 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 NDUFA4O00483 81 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 COX7BP24311 80 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 SPINK7P58062 85 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 PLAC4Q8WY50 150 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 OBSCN-AS1Q96MR7 158 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 AHCTF1Q8WYP5 2266 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 ICE1Q9Y2F5 2266 aa1.87□□□□□ -2.11
HMGB3P15-201ENST00000507326 SMIM27A0A1W2PRY6 76 aa1.86□□□□□ -2.11
HMGB3P15-201ENST00000507326 H0YGX0 51 aa1.86□□□□□ -2.11
HMGB3P15-201ENST00000507326 Q6ZRX8 168 aa1.86□□□□□ -2.11
HMGB3P15-201ENST00000507326 ABCA1O95477 2261 aa1.86□□□□□ -2.11
HMGB3P15-201ENST00000507326 F5P12259 2224 aa1.85□□□□□ -2.11
HMGB3P15-201ENST00000507326 ZCCHC13Q8WW36 166 aaKnown RBP1.85□□□□□ -2.11
HMGB3P15-201ENST00000507326 LINC00472Q9H8W2 130 aa1.85□□□□□ -2.11
HMGB3P15-201ENST00000507326 URB1O60287 2271 aaKnown RBP1.85□□□□□ -2.11
HMGB3P15-201ENST00000507326 PDE4DIPQ5VU43 2346 aa1.85□□□□□ -2.11
HMGB3P15-201ENST00000507326 KNTC1P50748 2209 aa1.85□□□□□ -2.11
HMGB3P15-201ENST00000507326 DNAH12Q6ZR08 3092 aa1.85□□□□□ -2.11
HMGB3P15-201ENST00000507326 SPTY2D1-AS1A0A0U1RR47 76 aa1.84□□□□□ -2.11
HMGB3P15-201ENST00000507326 SNRPGP62308 76 aaKnown RBP1.84□□□□□ -2.11
HMGB3P15-201ENST00000507326 DEFB103AP81534 67 aa1.84□□□□□ -2.11
HMGB3P15-201ENST00000507326 UNQ6190/PRO20217Q6UXQ8 127 aa1.84□□□□□ -2.11
HMGB3P15-201ENST00000507326 COX14Q96I36 57 aa1.84□□□□□ -2.11
HMGB3P15-201ENST00000507326 SPTBN5Q9NRC6 3674 aaKnown RBP1.84□□□□□ -2.12
HMGB3P15-201ENST00000507326 CDH23Q9H251 3354 aa1.83□□□□□ -2.12
HMGB3P15-201ENST00000507326 ETDCA0A1B0GVM5 59 aa1.83□□□□□ -2.12
HMGB3P15-201ENST00000507326 M0R1W7 72 aa1.83□□□□□ -2.12
HMGB3P15-201ENST00000507326 SSBP3-AS1Q7Z2R9 100 aa1.83□□□□□ -2.12
HMGB3P15-201ENST00000507326 LAMA3Q16787 3333 aa1.83□□□□□ -2.12
HMGB3P15-201ENST00000507326 GOLGA4Q13439 2230 aaKnown RBP1.82□□□□□ -2.12
HMGB3P15-201ENST00000507326 ARL14EPLP0DKL9 152 aa1.82□□□□□ -2.12
HMGB3P15-201ENST00000507326 Q6ZRN7 208 aaPredicted RBP1.82□□□□□ -2.12
HMGB3P15-201ENST00000507326 UBE2DNLQ8IWF7 75 aa1.82□□□□□ -2.12
HMGB3P15-201ENST00000507326 KCNQ1DNQ9H478 68 aa1.82□□□□□ -2.12
HMGB3P15-201ENST00000507326 MKI67P46013 3256 aaKnown RBP1.82□□□□□ -2.12
HMGB3P15-201ENST00000507326 CHD7Q9P2D1 2997 aa1.81□□□□□ -2.12
HMGB3P15-201ENST00000507326 DNAH14Q0VDD8 3507 aa1.81□□□□□ -2.12
HMGB3P15-201ENST00000507326 A0A096LNT2 108 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms