RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
SNF8-205ENST00000507302 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
SNF8-205ENST00000507302 Q8N377 158 aa9.1□□□□□ -0.95
SNF8-205ENST00000507302 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
SNF8-205ENST00000507302 LINC00483Q53H64 154 aa9.09□□□□□ -0.95
SNF8-205ENST00000507302 A0A1B0GVG6 124 aa9.08□□□□□ -0.96
SNF8-205ENST00000507302 SPRR1AP35321 89 aa9.07□□□□□ -0.96
SNF8-205ENST00000507302 PMVKQ15126 192 aa9.07□□□□□ -0.96
SNF8-205ENST00000507302 FAM19A2Q8N3H0 131 aa9.07□□□□□ -0.96
SNF8-205ENST00000507302 KRTAP4-16G5E9R7 235 aaPredicted RBP9.06□□□□□ -0.96
SNF8-205ENST00000507302 H3BRM9 83 aa9.06□□□□□ -0.96
SNF8-205ENST00000507302 RAB14P61106 215 aa9.06□□□□□ -0.96
SNF8-205ENST00000507302 ANAPC16Q96DE5 110 aa9.06□□□□□ -0.96
SNF8-205ENST00000507302 NDUFA12Q9UI09 145 aa9.06□□□□□ -0.96
SNF8-205ENST00000507302 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
SNF8-205ENST00000507302 KRTAP10-6P60371 365 aaPredicted RBP9.04□□□□□ -0.96
SNF8-205ENST00000507302 PRYO14603 147 aa9.02□□□□□ -0.97
SNF8-205ENST00000507302 SLC25A20O43772 301 aa9.02□□□□□ -0.97
SNF8-205ENST00000507302 MT-ND4LP03901 98 aa9.02□□□□□ -0.97
SNF8-205ENST00000507302 SSBP3-AS1Q7Z2R9 100 aa9.02□□□□□ -0.97
SNF8-205ENST00000507302 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.97
SNF8-205ENST00000507302 ZNF22P17026 224 aaPredicted RBP9.01□□□□□ -0.97
SNF8-205ENST00000507302 SFTA2Q6UW10 78 aa9.01□□□□□ -0.97
SNF8-205ENST00000507302 ZNF625Q96I27 306 aaPredicted RBP9.01□□□□□ -0.97
SNF8-205ENST00000507302 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
SNF8-205ENST00000507302 KIAA1644Q3SXP7 199 aa9□□□□□ -0.97
SNF8-205ENST00000507302 MOBPQ13875 183 aa8.96□□□□□ -0.98
SNF8-205ENST00000507302 FLGP20930 4061 aaPredicted RBP8.95□□□□□ -0.98
SNF8-205ENST00000507302 hCG_2014768A0A024R1R8 64 aa8.94□□□□□ -0.98
SNF8-205ENST00000507302 A0A096LNJ9 63 aa8.94□□□□□ -0.98
SNF8-205ENST00000507302 GAGE2AQ6NT46 116 aa8.94□□□□□ -0.98
SNF8-205ENST00000507302 PCOTHQ58A44 107 aa8.93□□□□□ -0.98
SNF8-205ENST00000507302 TRAV9-1A0A075B6T8 112 aa8.92□□□□□ -0.98
SNF8-205ENST00000507302 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
SNF8-205ENST00000507302 B5MCH6 92 aa8.92□□□□□ -0.98
SNF8-205ENST00000507302 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
SNF8-205ENST00000507302 IGLV8-61A0A075B6I0 122 aa8.91□□□□□ -0.98
SNF8-205ENST00000507302 ETDCA0A1B0GVM5 59 aa8.91□□□□□ -0.98
SNF8-205ENST00000507302 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
SNF8-205ENST00000507302 LINC00158P58513 81 aa8.91□□□□□ -0.98
SNF8-205ENST00000507302 TRBV10-3A0A0K0K1G6 114 aa8.89□□□□□ -0.99
SNF8-205ENST00000507302 KRTAP9-7A8MTY7 169 aa8.89□□□□□ -0.99
SNF8-205ENST00000507302 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
SNF8-205ENST00000507302 BOD1L2Q8IYS8 172 aa8.89□□□□□ -0.99
SNF8-205ENST00000507302 Q9BRP9 147 aa8.89□□□□□ -0.99
SNF8-205ENST00000507302 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.87□□□□□ -0.99
SNF8-205ENST00000507302 NCR3O14931 201 aa8.87□□□□□ -0.99
SNF8-205ENST00000507302 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
SNF8-205ENST00000507302 URB1-AS1Q96HZ7 61 aa8.86□□□□□ -0.99
SNF8-205ENST00000507302 SMCO4Q9NRQ5 59 aa8.86□□□□□ -0.99
SNF8-205ENST00000507302 A0A0U1RRA0 63 aa8.85□□□□□ -0.99
SNF8-205ENST00000507302 SMIM13P0DJ93 91 aa8.85□□□□□ -0.99
SNF8-205ENST00000507302 NDUFA6P56556 154 aa8.85□□□□□ -0.99
SNF8-205ENST00000507302 Q6ZRX8 168 aa8.85□□□□□ -0.99
SNF8-205ENST00000507302 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
SNF8-205ENST00000507302 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
SNF8-205ENST00000507302 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
SNF8-205ENST00000507302 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
SNF8-205ENST00000507302 HBDP02042 147 aa8.82□□□□□ -1
SNF8-205ENST00000507302 COX19Q49B96 90 aa8.82□□□□□ -1
SNF8-205ENST00000507302 BAGE3Q86Y29 109 aa8.82□□□□□ -1
SNF8-205ENST00000507302 TRBV10-2A0A0K0K1G8 114 aa8.8□□□□□ -1
SNF8-205ENST00000507302 HERV-K104P63124 156 aa8.8□□□□□ -1
SNF8-205ENST00000507302 C5orf52A6NGY3 159 aa8.79□□□□□ -1
SNF8-205ENST00000507302 M0R2T5 61 aa8.79□□□□□ -1
SNF8-205ENST00000507302 LINC00614P0C842 121 aa8.79□□□□□ -1
SNF8-205ENST00000507302 S100A12P80511 92 aa8.79□□□□□ -1
SNF8-205ENST00000507302 C9orf92A6NGG3 77 aa8.78□□□□□ -1
SNF8-205ENST00000507302 ATP6V1G1O75348 118 aa8.78□□□□□ -1
SNF8-205ENST00000507302 DDTP30046 118 aa8.78□□□□□ -1
SNF8-205ENST00000507302 C9orf153Q5TBE3 101 aa8.78□□□□□ -1
SNF8-205ENST00000507302 C18orf32Q8TCD1 76 aa8.78□□□□□ -1
SNF8-205ENST00000507302 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
SNF8-205ENST00000507302 FABP9Q0Z7S8 132 aa8.77□□□□□ -1.01
SNF8-205ENST00000507302 LIMD2Q9BT23 127 aa8.77□□□□□ -1.01
SNF8-205ENST00000507302 CHTOPQ9Y3Y2 248 aaKnown RBP8.77□□□□□ -1.01
SNF8-205ENST00000507302 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
SNF8-205ENST00000507302 PMCHL1Q16048 86 aa8.76□□□□□ -1.01
SNF8-205ENST00000507302 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
SNF8-205ENST00000507302 TRAV12-1A0A0B4J245 112 aa8.75□□□□□ -1.01
SNF8-205ENST00000507302 SPRR1BP22528 89 aa8.75□□□□□ -1.01
SNF8-205ENST00000507302 S100PP25815 95 aa8.74□□□□□ -1.01
SNF8-205ENST00000507302 JOSD1Q15040 202 aaPredicted RBP8.73□□□□□ -1.01
SNF8-205ENST00000507302 ST20-AS1Q8NBB2 130 aa8.73□□□□□ -1.01
SNF8-205ENST00000507302 MAP1LC3CQ9BXW4 147 aa8.73□□□□□ -1.01
SNF8-205ENST00000507302 SEC11CQ9BY50 192 aa8.73□□□□□ -1.01
SNF8-205ENST00000507302 SPANXB1Q9NS25 103 aaPredicted RBP8.72□□□□□ -1.01
SNF8-205ENST00000507302 NDUFC2O95298 119 aa8.71□□□□□ -1.02
SNF8-205ENST00000507302 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.02
SNF8-205ENST00000507302 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
SNF8-205ENST00000507302 TMEM218A2RU14 115 aa8.7□□□□□ -1.02
SNF8-205ENST00000507302 Q5XG85 94 aa8.7□□□□□ -1.02
SNF8-205ENST00000507302 CD164Q04900 197 aa8.69□□□□□ -1.02
SNF8-205ENST00000507302 COX6B2Q6YFQ2 88 aa8.69□□□□□ -1.02
SNF8-205ENST00000507302 TRAV23DV6A0A075B6W5 121 aa8.68□□□□□ -1.02
SNF8-205ENST00000507302 ZNF73O43830 326 aaPredicted RBP8.68□□□□□ -1.02
SNF8-205ENST00000507302 UQCC3Q6UW78 93 aa8.68□□□□□ -1.02
SNF8-205ENST00000507302 SSPOA2VEC9 5147 aa8.67□□□□□ -1.02
SNF8-205ENST00000507302 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
SNF8-205ENST00000507302 CLLU1Q5K131 121 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms