RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
HMGCS1-203ENST00000507004 IGKV2D-26A0A0A0MRZ7 120 aa8.49□□□□□ -1.05
HMGCS1-203ENST00000507004 IFI27L1Q96BM0 104 aa8.49□□□□□ -1.05
HMGCS1-203ENST00000507004 ATP6V1G1O75348 118 aa8.48□□□□□ -1.05
HMGCS1-203ENST00000507004 TSPAN13O95857 204 aa8.48□□□□□ -1.05
HMGCS1-203ENST00000507004 LINC00158P58513 81 aa8.48□□□□□ -1.05
HMGCS1-203ENST00000507004 HERV-K104P63124 156 aa8.48□□□□□ -1.05
HMGCS1-203ENST00000507004 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
HMGCS1-203ENST00000507004 M0R378 163 aa8.46□□□□□ -1.06
HMGCS1-203ENST00000507004 HSBP1O75506 76 aa8.46□□□□□ -1.06
HMGCS1-203ENST00000507004 PRLHP81277 87 aa8.46□□□□□ -1.06
HMGCS1-203ENST00000507004 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.06
HMGCS1-203ENST00000507004 A0A0U1RQV1 116 aa8.45□□□□□ -1.06
HMGCS1-203ENST00000507004 SCO1O75880 301 aa8.45□□□□□ -1.06
HMGCS1-203ENST00000507004 S100A12P80511 92 aa8.45□□□□□ -1.06
HMGCS1-203ENST00000507004 CBLN2Q8IUK8 224 aa8.45□□□□□ -1.06
HMGCS1-203ENST00000507004 MAP1LC3CQ9BXW4 147 aa8.45□□□□□ -1.06
HMGCS1-203ENST00000507004 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
HMGCS1-203ENST00000507004 LPAP08519 4548 aa8.45□□□□□ -1.06
HMGCS1-203ENST00000507004 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
HMGCS1-203ENST00000507004 MEIG1Q5JSS6 88 aa8.44□□□□□ -1.06
HMGCS1-203ENST00000507004 KRTAP13-2Q52LG2 175 aa8.43□□□□□ -1.06
HMGCS1-203ENST00000507004 SPAG11AQ6PDA7 123 aa8.43□□□□□ -1.06
HMGCS1-203ENST00000507004 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
HMGCS1-203ENST00000507004 YPEL4Q96NS1 127 aa8.43□□□□□ -1.06
HMGCS1-203ENST00000507004 MYMXA0A1B0GTQ4 84 aa8.42□□□□□ -1.06
HMGCS1-203ENST00000507004 PRYO14603 147 aa8.42□□□□□ -1.06
HMGCS1-203ENST00000507004 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
HMGCS1-203ENST00000507004 HIGD2AQ9BW72 106 aa8.41□□□□□ -1.06
HMGCS1-203ENST00000507004 SMIM13P0DJ93 91 aa8.4□□□□□ -1.06
HMGCS1-203ENST00000507004 BOD1L2Q8IYS8 172 aa8.4□□□□□ -1.06
HMGCS1-203ENST00000507004 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
HMGCS1-203ENST00000507004 NDUFA12Q9UI09 145 aa8.4□□□□□ -1.06
HMGCS1-203ENST00000507004 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
HMGCS1-203ENST00000507004 LEPROTL1O95214 131 aa8.39□□□□□ -1.07
HMGCS1-203ENST00000507004 MIR7-3HGQ8N6C7 128 aa8.39□□□□□ -1.07
HMGCS1-203ENST00000507004 Q8NDZ9 215 aa8.39□□□□□ -1.07
HMGCS1-203ENST00000507004 PLNP26678 52 aa8.38□□□□□ -1.07
HMGCS1-203ENST00000507004 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
HMGCS1-203ENST00000507004 HSPB8Q9UJY1 196 aa8.38□□□□□ -1.07
HMGCS1-203ENST00000507004 SPRR1AP35321 89 aa8.37□□□□□ -1.07
HMGCS1-203ENST00000507004 HERVK_113P61574 105 aa8.37□□□□□ -1.07
HMGCS1-203ENST00000507004 C4orf48Q5BLP8 95 aa8.37□□□□□ -1.07
HMGCS1-203ENST00000507004 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
HMGCS1-203ENST00000507004 ETDCA0A1B0GVM5 59 aa8.36□□□□□ -1.07
HMGCS1-203ENST00000507004 NMUP48645 174 aa8.36□□□□□ -1.07
HMGCS1-203ENST00000507004 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
HMGCS1-203ENST00000507004 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
HMGCS1-203ENST00000507004 LOC107984156A0A0G2JMH3 177 aa8.35□□□□□ -1.07
HMGCS1-203ENST00000507004 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
HMGCS1-203ENST00000507004 LEPROTO15243 131 aa8.35□□□□□ -1.07
HMGCS1-203ENST00000507004 ARL17AQ8IVW1 177 aa8.35□□□□□ -1.07
HMGCS1-203ENST00000507004 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
HMGCS1-203ENST00000507004 TRGC2P03986 189 aa8.34□□□□□ -1.07
HMGCS1-203ENST00000507004 MIEN1Q9BRT3 115 aa8.34□□□□□ -1.07
HMGCS1-203ENST00000507004 H0Y8G0 127 aa8.33□□□□□ -1.08
HMGCS1-203ENST00000507004 NCR3O14931 201 aa8.33□□□□□ -1.08
HMGCS1-203ENST00000507004 DPM2O94777 84 aa8.33□□□□□ -1.08
HMGCS1-203ENST00000507004 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
HMGCS1-203ENST00000507004 CDIP1Q9H305 208 aa8.33□□□□□ -1.08
HMGCS1-203ENST00000507004 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
HMGCS1-203ENST00000507004 SERF1AO75920 110 aa8.32□□□□□ -1.08
HMGCS1-203ENST00000507004 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
HMGCS1-203ENST00000507004 CBY1Q9Y3M2 126 aa8.32□□□□□ -1.08
HMGCS1-203ENST00000507004 KRTAP4-16G5E9R7 235 aaPredicted RBP8.31□□□□□ -1.08
HMGCS1-203ENST00000507004 J3QQQ9 107 aa8.31□□□□□ -1.08
HMGCS1-203ENST00000507004 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
HMGCS1-203ENST00000507004 SMCR5Q8TEV8 140 aa8.31□□□□□ -1.08
HMGCS1-203ENST00000507004 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
HMGCS1-203ENST00000507004 SPANXB1Q9NS25 103 aaPredicted RBP8.31□□□□□ -1.08
HMGCS1-203ENST00000507004 NDUFC2O95298 119 aa8.3□□□□□ -1.08
HMGCS1-203ENST00000507004 IGKCP01834 107 aa8.3□□□□□ -1.08
HMGCS1-203ENST00000507004 SPINK1P00995 79 aa8.29□□□□□ -1.08
HMGCS1-203ENST00000507004 DDTP30046 118 aa8.29□□□□□ -1.08
HMGCS1-203ENST00000507004 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
HMGCS1-203ENST00000507004 JOSD1Q15040 202 aaPredicted RBP8.28□□□□□ -1.08
HMGCS1-203ENST00000507004 B5MCH6 92 aa8.27□□□□□ -1.09
HMGCS1-203ENST00000507004 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.09
HMGCS1-203ENST00000507004 S100A7L2Q5SY68 101 aa8.27□□□□□ -1.09
HMGCS1-203ENST00000507004 SSBP3-AS1Q7Z2R9 100 aa8.27□□□□□ -1.09
HMGCS1-203ENST00000507004 PPDPFQ9H3Y8 114 aa8.27□□□□□ -1.09
HMGCS1-203ENST00000507004 FABP4P15090 132 aa8.26□□□□□ -1.09
HMGCS1-203ENST00000507004 LINC00310P59036 64 aa8.26□□□□□ -1.09
HMGCS1-203ENST00000507004 RPS29P62273 56 aaKnown RBP8.26□□□□□ -1.09
HMGCS1-203ENST00000507004 Q8NBF4 154 aa8.26□□□□□ -1.09
HMGCS1-203ENST00000507004 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
HMGCS1-203ENST00000507004 Q6ZRX8 168 aa8.25□□□□□ -1.09
HMGCS1-203ENST00000507004 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
HMGCS1-203ENST00000507004 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
HMGCS1-203ENST00000507004 GAGE2AQ6NT46 116 aa8.24□□□□□ -1.09
HMGCS1-203ENST00000507004 DAND5Q8N907 189 aa8.24□□□□□ -1.09
HMGCS1-203ENST00000507004 COLCA2A8K830 154 aa8.23□□□□□ -1.09
HMGCS1-203ENST00000507004 E9PLD3 99 aa8.23□□□□□ -1.09
HMGCS1-203ENST00000507004 MUC2Q02817 5179 aa8.22□□□□□ -1.09
HMGCS1-203ENST00000507004 TRAV23DV6A0A075B6W5 121 aa8.22□□□□□ -1.09
HMGCS1-203ENST00000507004 PMCHL2Q9BQD1 86 aa8.21□□□□□ -1.1
HMGCS1-203ENST00000507004 A0A0J9YXY3 114 aa8.2□□□□□ -1.1
HMGCS1-203ENST00000507004 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
HMGCS1-203ENST00000507004 TIMM17BO60830 172 aa8.19□□□□□ -1.1
HMGCS1-203ENST00000507004 MOBPQ13875 183 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms