RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 CTAG1AP78358 180 aa12.85□□□□□ -0.35
SUDS3P1-201ENST00000505831 CHTOPQ9Y3Y2 248 aaKnown RBP12.85□□□□□ -0.35
SUDS3P1-201ENST00000505831 IGKV2D-26A0A0A0MRZ7 120 aa12.83□□□□□ -0.36
SUDS3P1-201ENST00000505831 TMEM223A0PJW6 202 aa12.83□□□□□ -0.36
SUDS3P1-201ENST00000505831 APOC3P02656 99 aa12.83□□□□□ -0.36
SUDS3P1-201ENST00000505831 YPEL4Q96NS1 127 aa12.83□□□□□ -0.36
SUDS3P1-201ENST00000505831 TRAV12-1A0A0B4J245 112 aa12.82□□□□□ -0.36
SUDS3P1-201ENST00000505831 RETNLBQ9BQ08 111 aa12.82□□□□□ -0.36
SUDS3P1-201ENST00000505831 LINC00158P58513 81 aa12.81□□□□□ -0.36
SUDS3P1-201ENST00000505831 CBLN2Q8IUK8 224 aa12.8□□□□□ -0.36
SUDS3P1-201ENST00000505831 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
SUDS3P1-201ENST00000505831 MUC17Q685J3 4493 aa12.79□□□□□ -0.36
SUDS3P1-201ENST00000505831 SNAPINO95295 136 aa12.79□□□□□ -0.36
SUDS3P1-201ENST00000505831 IFI27L1Q96BM0 104 aa12.79□□□□□ -0.36
SUDS3P1-201ENST00000505831 SVBPQ8N300 66 aa12.78□□□□□ -0.36
SUDS3P1-201ENST00000505831 C3orf22Q8N5N4 141 aa12.78□□□□□ -0.36
SUDS3P1-201ENST00000505831 FAT4Q6V0I7 4981 aa12.77□□□□□ -0.36
SUDS3P1-201ENST00000505831 A0A0U1RRA0 63 aa12.76□□□□□ -0.37
SUDS3P1-201ENST00000505831 HIGD2AQ9BW72 106 aa12.76□□□□□ -0.37
SUDS3P1-201ENST00000505831 SMIM13P0DJ93 91 aa12.75□□□□□ -0.37
SUDS3P1-201ENST00000505831 TPRXLQ17RH7 258 aa12.75□□□□□ -0.37
SUDS3P1-201ENST00000505831 SPRR4Q96PI1 79 aa12.75□□□□□ -0.37
SUDS3P1-201ENST00000505831 A0A0U1RQV1 116 aa12.73□□□□□ -0.37
SUDS3P1-201ENST00000505831 SPRR1AP35321 89 aa12.73□□□□□ -0.37
SUDS3P1-201ENST00000505831 NDUFA5Q16718 116 aa12.73□□□□□ -0.37
SUDS3P1-201ENST00000505831 IGLV7-46A0A075B6I9 117 aa12.72□□□□□ -0.37
SUDS3P1-201ENST00000505831 KRTAP4-16G5E9R7 235 aaPredicted RBP12.71□□□□□ -0.37
SUDS3P1-201ENST00000505831 HERV-K104P63124 156 aa12.71□□□□□ -0.37
SUDS3P1-201ENST00000505831 BOD1L2Q8IYS8 172 aa12.71□□□□□ -0.37
SUDS3P1-201ENST00000505831 MIR7-3HGQ8N6C7 128 aa12.71□□□□□ -0.37
SUDS3P1-201ENST00000505831 KCNQ1DNQ9H478 68 aa12.71□□□□□ -0.37
SUDS3P1-201ENST00000505831 PRYO14603 147 aa12.7□□□□□ -0.38
SUDS3P1-201ENST00000505831 SPAG11AQ6PDA7 123 aa12.7□□□□□ -0.38
SUDS3P1-201ENST00000505831 LINC00337Q8N6G1 96 aa12.7□□□□□ -0.38
SUDS3P1-201ENST00000505831 FAM19A2Q8N3H0 131 aa12.69□□□□□ -0.38
SUDS3P1-201ENST00000505831 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
SUDS3P1-201ENST00000505831 MEIG1Q5JSS6 88 aa12.67□□□□□ -0.38
SUDS3P1-201ENST00000505831 LCE2AQ5TA79 106 aaPredicted RBP12.67□□□□□ -0.38
SUDS3P1-201ENST00000505831 CDIP1Q9H305 208 aa12.67□□□□□ -0.38
SUDS3P1-201ENST00000505831 NDUFA12Q9UI09 145 aa12.67□□□□□ -0.38
SUDS3P1-201ENST00000505831 LOC107984156A0A0G2JMH3 177 aa12.66□□□□□ -0.38
SUDS3P1-201ENST00000505831 LINC00587B1AMM8 73 aa12.66□□□□□ -0.38
SUDS3P1-201ENST00000505831 ARL17AQ8IVW1 177 aa12.66□□□□□ -0.38
SUDS3P1-201ENST00000505831 SMCR5Q8TEV8 140 aa12.66□□□□□ -0.38
SUDS3P1-201ENST00000505831 ZNF706Q9Y5V0 76 aaPredicted RBP12.66□□□□□ -0.38
SUDS3P1-201ENST00000505831 NCR3O14931 201 aa12.65□□□□□ -0.38
SUDS3P1-201ENST00000505831 HSBP1O75506 76 aa12.65□□□□□ -0.38
SUDS3P1-201ENST00000505831 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
SUDS3P1-201ENST00000505831 TRBV10-3A0A0K0K1G6 114 aa12.63□□□□□ -0.39
SUDS3P1-201ENST00000505831 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
SUDS3P1-201ENST00000505831 LINC00310P59036 64 aa12.62□□□□□ -0.39
SUDS3P1-201ENST00000505831 TSPEAR-AS2P59090 65 aa12.62□□□□□ -0.39
SUDS3P1-201ENST00000505831 LINC00483Q53H64 154 aa12.61□□□□□ -0.39
SUDS3P1-201ENST00000505831 MAP1LC3CQ9BXW4 147 aa12.61□□□□□ -0.39
SUDS3P1-201ENST00000505831 Q8NBF4 154 aa12.6□□□□□ -0.39
SUDS3P1-201ENST00000505831 ETDCA0A1B0GVM5 59 aa12.59□□□□□ -0.39
SUDS3P1-201ENST00000505831 LEPROTO15243 131 aa12.59□□□□□ -0.39
SUDS3P1-201ENST00000505831 TRGC2P03986 189 aa12.59□□□□□ -0.39
SUDS3P1-201ENST00000505831 FP248Q71RG6 208 aaPredicted RBP12.59□□□□□ -0.39
SUDS3P1-201ENST00000505831 DAND5Q8N907 189 aa12.59□□□□□ -0.39
SUDS3P1-201ENST00000505831 B5MCH6 92 aa12.58□□□□□ -0.4
SUDS3P1-201ENST00000505831 LEPROTL1O95214 131 aa12.58□□□□□ -0.4
SUDS3P1-201ENST00000505831 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.4
SUDS3P1-201ENST00000505831 TRBV10-2A0A0K0K1G8 114 aa12.57□□□□□ -0.4
SUDS3P1-201ENST00000505831 H0Y8G0 127 aa12.57□□□□□ -0.4
SUDS3P1-201ENST00000505831 SERF1AO75920 110 aa12.56□□□□□ -0.4
SUDS3P1-201ENST00000505831 ERC2-IT1O76042 136 aa12.55□□□□□ -0.4
SUDS3P1-201ENST00000505831 PLNP26678 52 aa12.55□□□□□ -0.4
SUDS3P1-201ENST00000505831 J3QQQ9 107 aa12.54□□□□□ -0.4
SUDS3P1-201ENST00000505831 SPINK1P00995 79 aa12.54□□□□□ -0.4
SUDS3P1-201ENST00000505831 KRTAP13-3Q3SY46 172 aa12.54□□□□□ -0.4
SUDS3P1-201ENST00000505831 Q9BRP9 147 aa12.53□□□□□ -0.4
SUDS3P1-201ENST00000505831 DDTP30046 118 aa12.52□□□□□ -0.41
SUDS3P1-201ENST00000505831 S100A12P80511 92 aa12.52□□□□□ -0.41
SUDS3P1-201ENST00000505831 DPM2O94777 84 aa12.51□□□□□ -0.41
SUDS3P1-201ENST00000505831 GAGE2AQ6NT46 116 aa12.51□□□□□ -0.41
SUDS3P1-201ENST00000505831 KRTAP9-2Q9BYQ4 174 aa12.51□□□□□ -0.41
SUDS3P1-201ENST00000505831 NDUFC2O95298 119 aa12.5□□□□□ -0.41
SUDS3P1-201ENST00000505831 IGLV6-57P01721 117 aa12.5□□□□□ -0.41
SUDS3P1-201ENST00000505831 NMUP48645 174 aa12.5□□□□□ -0.41
SUDS3P1-201ENST00000505831 Q6ZRX8 168 aa12.5□□□□□ -0.41
SUDS3P1-201ENST00000505831 HSPB8Q9UJY1 196 aa12.5□□□□□ -0.41
SUDS3P1-201ENST00000505831 SSBP3-AS1Q7Z2R9 100 aa12.49□□□□□ -0.41
SUDS3P1-201ENST00000505831 PMCHL2Q9BQD1 86 aa12.49□□□□□ -0.41
SUDS3P1-201ENST00000505831 SPANXB1Q9NS25 103 aaPredicted RBP12.49□□□□□ -0.41
SUDS3P1-201ENST00000505831 FABP4P15090 132 aa12.48□□□□□ -0.41
SUDS3P1-201ENST00000505831 IGKCP01834 107 aa12.47□□□□□ -0.41
SUDS3P1-201ENST00000505831 HERVK_113P61574 105 aa12.47□□□□□ -0.41
SUDS3P1-201ENST00000505831 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
SUDS3P1-201ENST00000505831 RPS29P62273 56 aaKnown RBP12.46□□□□□ -0.41
SUDS3P1-201ENST00000505831 COLCA2A8K830 154 aa12.45□□□□□ -0.42
SUDS3P1-201ENST00000505831 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
SUDS3P1-201ENST00000505831 MOBPQ13875 183 aa12.45□□□□□ -0.42
SUDS3P1-201ENST00000505831 ADAMTSL4-AS1Q5T5F5 129 aa12.45□□□□□ -0.42
SUDS3P1-201ENST00000505831 SOSTDC1Q6X4U4 206 aa12.45□□□□□ -0.42
SUDS3P1-201ENST00000505831 IGLV9-49A0A0B4J1Y8 123 aa12.44□□□□□ -0.42
SUDS3P1-201ENST00000505831 ASB16-AS1Q495Z4 193 aa12.44□□□□□ -0.42
SUDS3P1-201ENST00000505831 Q8N377 158 aa12.44□□□□□ -0.42
SUDS3P1-201ENST00000505831 MIEN1Q9BRT3 115 aa12.44□□□□□ -0.42
SUDS3P1-201ENST00000505831 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms