RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 C11orf86A6NJI1 115 aa14.36□□□□□ -0.11
HERC4-212ENST00000505760 M0R378 163 aa14.35□□□□□ -0.11
HERC4-212ENST00000505760 Q8NDZ9 215 aa14.33□□□□□ -0.12
HERC4-212ENST00000505760 CBLN2Q8IUK8 224 aa14.32□□□□□ -0.12
HERC4-212ENST00000505760 LINC00158P58513 81 aa14.31□□□□□ -0.12
HERC4-212ENST00000505760 PLEKHB2Q96CS7 222 aa14.31□□□□□ -0.12
HERC4-212ENST00000505760 CHTOPQ9Y3Y2 248 aaKnown RBP14.3□□□□□ -0.12
HERC4-212ENST00000505760 HIGD2AQ9BW72 106 aa14.29□□□□□ -0.12
HERC4-212ENST00000505760 A0A0U1RRA0 63 aa14.27□□□□□ -0.13
HERC4-212ENST00000505760 CTAG1AP78358 180 aa14.26□□□□□ -0.13
HERC4-212ENST00000505760 CDIP1Q9H305 208 aa14.26□□□□□ -0.13
HERC4-212ENST00000505760 C3orf22Q8N5N4 141 aa14.25□□□□□ -0.13
HERC4-212ENST00000505760 IGLV7-46A0A075B6I9 117 aa14.24□□□□□ -0.13
HERC4-212ENST00000505760 TMEM223A0PJW6 202 aa14.23□□□□□ -0.13
HERC4-212ENST00000505760 ATP6V1G1O75348 118 aa14.23□□□□□ -0.13
HERC4-212ENST00000505760 APOC3P02656 99 aa14.23□□□□□ -0.13
HERC4-212ENST00000505760 TPRXLQ17RH7 258 aa14.23□□□□□ -0.13
HERC4-212ENST00000505760 TRAV12-1A0A0B4J245 112 aa14.2□□□□□ -0.14
HERC4-212ENST00000505760 IFI27L1Q96BM0 104 aa14.2□□□□□ -0.14
HERC4-212ENST00000505760 SPRR4Q96PI1 79 aa14.2□□□□□ -0.14
HERC4-212ENST00000505760 SNAPINO95295 136 aa14.19□□□□□ -0.14
HERC4-212ENST00000505760 SMIM13P0DJ93 91 aa14.19□□□□□ -0.14
HERC4-212ENST00000505760 MEIG1Q5JSS6 88 aa14.19□□□□□ -0.14
HERC4-212ENST00000505760 BOD1L2Q8IYS8 172 aa14.19□□□□□ -0.14
HERC4-212ENST00000505760 CHCHD1Q96BP2 118 aaKnown RBP14.19□□□□□ -0.14
HERC4-212ENST00000505760 ZNF706Q9Y5V0 76 aaPredicted RBP14.19□□□□□ -0.14
HERC4-212ENST00000505760 NDUFA5Q16718 116 aa14.18□□□□□ -0.14
HERC4-212ENST00000505760 SPAG11AQ6PDA7 123 aa14.18□□□□□ -0.14
HERC4-212ENST00000505760 SVBPQ8N300 66 aa14.18□□□□□ -0.14
HERC4-212ENST00000505760 PRYO14603 147 aa14.17□□□□□ -0.14
HERC4-212ENST00000505760 NCR3O14931 201 aa14.15□□□□□ -0.14
HERC4-212ENST00000505760 C4orf48Q5BLP8 95 aa14.15□□□□□ -0.14
HERC4-212ENST00000505760 MIR7-3HGQ8N6C7 128 aa14.15□□□□□ -0.14
HERC4-212ENST00000505760 PPDPFQ9H3Y8 114 aa14.15□□□□□ -0.14
HERC4-212ENST00000505760 FAT4Q6V0I7 4981 aa14.14□□□□□ -0.15
HERC4-212ENST00000505760 MUC17Q685J3 4493 aa14.14□□□□□ -0.15
HERC4-212ENST00000505760 HERV-K104P63124 156 aa14.14□□□□□ -0.15
HERC4-212ENST00000505760 LINC00587B1AMM8 73 aa14.12□□□□□ -0.15
HERC4-212ENST00000505760 LINC00337Q8N6G1 96 aa14.12□□□□□ -0.15
HERC4-212ENST00000505760 ETDCA0A1B0GVM5 59 aa14.11□□□□□ -0.15
HERC4-212ENST00000505760 KCNQ1DNQ9H478 68 aa14.11□□□□□ -0.15
HERC4-212ENST00000505760 NDUFA12Q9UI09 145 aa14.1□□□□□ -0.15
HERC4-212ENST00000505760 HSBP1O75506 76 aa14.09□□□□□ -0.15
HERC4-212ENST00000505760 SPRR1AP35321 89 aa14.09□□□□□ -0.15
HERC4-212ENST00000505760 SMCR5Q8TEV8 140 aa14.09□□□□□ -0.15
HERC4-212ENST00000505760 MAP1LC3CQ9BXW4 147 aa14.09□□□□□ -0.15
HERC4-212ENST00000505760 MYMXA0A1B0GTQ4 84 aa14.08□□□□□ -0.16
HERC4-212ENST00000505760 FAM19A2Q8N3H0 131 aa14.08□□□□□ -0.16
HERC4-212ENST00000505760 DAND5Q8N907 189 aa14.08□□□□□ -0.16
HERC4-212ENST00000505760 Q8NBF4 154 aa14.08□□□□□ -0.16
HERC4-212ENST00000505760 YPEL4Q96NS1 127 aa14.08□□□□□ -0.16
HERC4-212ENST00000505760 TRBV10-3A0A0K0K1G6 114 aa14.07□□□□□ -0.16
HERC4-212ENST00000505760 H0Y8G0 127 aa14.07□□□□□ -0.16
HERC4-212ENST00000505760 S100A12P80511 92 aa14.07□□□□□ -0.16
HERC4-212ENST00000505760 LCE2AQ5TA79 106 aaPredicted RBP14.07□□□□□ -0.16
HERC4-212ENST00000505760 FP248Q71RG6 208 aaPredicted RBP14.06□□□□□ -0.16
HERC4-212ENST00000505760 KRTAP4-16G5E9R7 235 aaPredicted RBP14.05□□□□□ -0.16
HERC4-212ENST00000505760 KRTAP9-2Q9BYQ4 174 aa14.02□□□□□ -0.17
HERC4-212ENST00000505760 SPINK1P00995 79 aa14□□□□□ -0.17
HERC4-212ENST00000505760 LINC00483Q53H64 154 aa14□□□□□ -0.17
HERC4-212ENST00000505760 GAGE2AQ6NT46 116 aa14□□□□□ -0.17
HERC4-212ENST00000505760 TSPEAR-AS2P59090 65 aa13.99□□□□□ -0.17
HERC4-212ENST00000505760 B5MCH6 92 aa13.98□□□□□ -0.17
HERC4-212ENST00000505760 LEPROTO15243 131 aa13.98□□□□□ -0.17
HERC4-212ENST00000505760 LEPROTL1O95214 131 aa13.98□□□□□ -0.17
HERC4-212ENST00000505760 DDTP30046 118 aa13.98□□□□□ -0.17
HERC4-212ENST00000505760 PLNP26678 52 aa13.97□□□□□ -0.17
HERC4-212ENST00000505760 LOC107984156A0A0G2JMH3 177 aa13.96□□□□□ -0.17
HERC4-212ENST00000505760 TRBV10-2A0A0K0K1G8 114 aa13.96□□□□□ -0.17
HERC4-212ENST00000505760 ARL17AQ8IVW1 177 aa13.96□□□□□ -0.17
HERC4-212ENST00000505760 IGLV9-49A0A0B4J1Y8 123 aa13.95□□□□□ -0.18
HERC4-212ENST00000505760 KRTAP13-3Q3SY46 172 aa13.95□□□□□ -0.18
HERC4-212ENST00000505760 MIEN1Q9BRT3 115 aa13.95□□□□□ -0.18
HERC4-212ENST00000505760 J3QQQ9 107 aa13.94□□□□□ -0.18
HERC4-212ENST00000505760 TRGC2P03986 189 aa13.94□□□□□ -0.18
HERC4-212ENST00000505760 MOBPQ13875 183 aa13.94□□□□□ -0.18
HERC4-212ENST00000505760 SERF1AO75920 110 aa13.93□□□□□ -0.18
HERC4-212ENST00000505760 ERC2-IT1O76042 136 aa13.93□□□□□ -0.18
HERC4-212ENST00000505760 HERVK_113P61574 105 aa13.93□□□□□ -0.18
HERC4-212ENST00000505760 SPANXB1Q9NS25 103 aaPredicted RBP13.93□□□□□ -0.18
HERC4-212ENST00000505760 DPM2O94777 84 aa13.91□□□□□ -0.18
HERC4-212ENST00000505760 NMUP48645 174 aa13.91□□□□□ -0.18
HERC4-212ENST00000505760 S100A7L2Q5SY68 101 aa13.91□□□□□ -0.18
HERC4-212ENST00000505760 Q6ZRX8 168 aa13.91□□□□□ -0.18
HERC4-212ENST00000505760 Q9BRP9 147 aa13.91□□□□□ -0.18
HERC4-212ENST00000505760 HSPB8Q9UJY1 196 aa13.91□□□□□ -0.18
HERC4-212ENST00000505760 LGALS3P17931 250 aaKnown RBP13.9□□□□□ -0.18
HERC4-212ENST00000505760 SSBP3-AS1Q7Z2R9 100 aa13.9□□□□□ -0.18
HERC4-212ENST00000505760 FABP4P15090 132 aa13.89□□□□□ -0.19
HERC4-212ENST00000505760 LINC00310P59036 64 aa13.89□□□□□ -0.19
HERC4-212ENST00000505760 PMCHL2Q9BQD1 86 aa13.88□□□□□ -0.19
HERC4-212ENST00000505760 NDUFC2O95298 119 aa13.87□□□□□ -0.19
HERC4-212ENST00000505760 IGKCP01834 107 aa13.87□□□□□ -0.19
HERC4-212ENST00000505760 RPS29P62273 56 aaKnown RBP13.87□□□□□ -0.19
HERC4-212ENST00000505760 IGLV6-57P01721 117 aa13.86□□□□□ -0.19
HERC4-212ENST00000505760 ASB16-AS1Q495Z4 193 aa13.86□□□□□ -0.19
HERC4-212ENST00000505760 JOSD1Q15040 202 aaPredicted RBP13.85□□□□□ -0.19
HERC4-212ENST00000505760 Q8N377 158 aa13.85□□□□□ -0.19
HERC4-212ENST00000505760 TRAV23DV6A0A075B6W5 121 aa13.84□□□□□ -0.19
HERC4-212ENST00000505760 SLC25A20O43772 301 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms