RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 C8orf87E5RJ46 101 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 PDE6DO43924 150 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 FOXA3P55318 350 aaPredicted RBP3.85□□□□□ -1.79
VCAN-206ENST00000505615 IFITM3Q01628 133 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 MARVELD1Q9BSK0 173 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 UBE2D4Q9Y2X8 147 aa3.85□□□□□ -1.79
VCAN-206ENST00000505615 TRBV30A0A0K0K1B3 111 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 A0A1B0GV50 99 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 PFDN1O60925 122 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 POLR2KP53803 58 aaKnown RBP3.84□□□□□ -1.79
VCAN-206ENST00000505615 C6orf99Q4VX62 202 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 RPL7L1Q6DKI1 246 aaKnown RBP3.84□□□□□ -1.79
VCAN-206ENST00000505615 C2orf66Q6UXQ4 117 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 C9orf62Q8N4C0 152 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 FAM104AQ969W3 186 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 CYTL1Q9NRR1 136 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 TP73-AS1Q9UF72 201 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 PYGO1Q9Y3Y4 419 aa3.84□□□□□ -1.79
VCAN-206ENST00000505615 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
VCAN-206ENST00000505615 TRBV27A0A0K0K1C4 114 aa3.83□□□□□ -1.8
VCAN-206ENST00000505615 M0R2T5 61 aa3.83□□□□□ -1.8
VCAN-206ENST00000505615 RPL35P42766 123 aaKnown RBP3.83□□□□□ -1.8
VCAN-206ENST00000505615 CENPWQ5EE01 88 aa3.83□□□□□ -1.8
VCAN-206ENST00000505615 C2orf82Q6UX34 121 aa3.83□□□□□ -1.8
VCAN-206ENST00000505615 KRTAP4-16G5E9R7 235 aaPredicted RBP3.82□□□□□ -1.8
VCAN-206ENST00000505615 AKR1C8PQ5T2L2 129 aa3.82□□□□□ -1.8
VCAN-206ENST00000505615 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
VCAN-206ENST00000505615 TEX261Q6UWH6 196 aa3.82□□□□□ -1.8
VCAN-206ENST00000505615 GNB1LQ9BYB4 327 aa3.82□□□□□ -1.8
VCAN-206ENST00000505615 LOC389332A0A1B0GUA5 103 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 HERVK_113P61574 105 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 Q8NBF4 154 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 LINC00167Q96N53 147 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 TIMM21Q9BVV7 248 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 ST20Q9HBF5 79 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 XAGE1AQ9HD64 81 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 DHRS4-AS1Q9P1J3 65 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
VCAN-206ENST00000505615 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
VCAN-206ENST00000505615 IGHV6-1A0A0B4J1U7 121 aa3.8□□□□□ -1.8
VCAN-206ENST00000505615 A0A1B0GVG6 124 aa3.8□□□□□ -1.8
VCAN-206ENST00000505615 ZNF727A8MUV8 499 aa3.8□□□□□ -1.8
VCAN-206ENST00000505615 UBE2AP49459 152 aa3.8□□□□□ -1.8
VCAN-206ENST00000505615 PCOTHQ58A44 107 aa3.8□□□□□ -1.8
VCAN-206ENST00000505615 DAND5Q8N907 189 aa3.8□□□□□ -1.8
VCAN-206ENST00000505615 EIF5A2Q9GZV4 153 aaKnown RBP3.8□□□□□ -1.8
VCAN-206ENST00000505615 TRBV20OR9-2A0A075B6H5 130 aa3.79□□□□□ -1.8
VCAN-206ENST00000505615 IGLV8-61A0A075B6I0 122 aa3.79□□□□□ -1.8
VCAN-206ENST00000505615 BORCS7-ASMTA0A0B4J1R7 106 aa3.79□□□□□ -1.8
VCAN-206ENST00000505615 JOSD1Q15040 202 aaPredicted RBP3.79□□□□□ -1.8
VCAN-206ENST00000505615 Q5BKY6 102 aa3.79□□□□□ -1.8
VCAN-206ENST00000505615 RBM12B-AS1Q9P1G2 102 aa3.79□□□□□ -1.8
VCAN-206ENST00000505615 RPL23P62829 140 aaKnown RBP3.78□□□□□ -1.8
VCAN-206ENST00000505615 CXCL6P80162 114 aa3.78□□□□□ -1.8
VCAN-206ENST00000505615 ORMDL2Q53FV1 153 aa3.78□□□□□ -1.8
VCAN-206ENST00000505615 MBD3L1Q8WWY6 194 aa3.78□□□□□ -1.8
VCAN-206ENST00000505615 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
VCAN-206ENST00000505615 ANAPC13Q9BS18 74 aa3.78□□□□□ -1.8
VCAN-206ENST00000505615 FAM236DA0A1B0GTK5 79 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 FAM236CP0DP71 79 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 FCER1GP30273 86 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 MP68P56378 58 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 RPL39P62891 51 aaKnown RBP3.77□□□□□ -1.81
VCAN-206ENST00000505615 CCL20P78556 96 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 PRLHP81277 87 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 KCNRGQ8N5I3 272 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 SFT2D1Q8WV19 159 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 SPANXCQ9NY87 97 aa3.77□□□□□ -1.81
VCAN-206ENST00000505615 IFITM10A6NMD0 228 aa3.76□□□□□ -1.81
VCAN-206ENST00000505615 GNG4P50150 75 aa3.76□□□□□ -1.81
VCAN-206ENST00000505615 MRPS36P82909 103 aaKnown RBP3.76□□□□□ -1.81
VCAN-206ENST00000505615 SMIM29Q86T20 159 aa3.76□□□□□ -1.81
VCAN-206ENST00000505615 Q8N377 158 aa3.76□□□□□ -1.81
VCAN-206ENST00000505615 LINC00587B1AMM8 73 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 F8W036 122 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 SPINK1P00995 79 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 CFC1P0CG37 223 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 SCGB1C2P0DMR2 95 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 HBBP68871 147 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 ATP5L2Q7Z4Y8 100 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 FAM213BQ8TBF2 198 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 TIMM17AQ99595 171 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 NDUFA12Q9UI09 145 aa3.75□□□□□ -1.81
VCAN-206ENST00000505615 FXYD6-FXYD2A0A087WZ82 144 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 SCO1O75880 301 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 NDUFC2O95298 119 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 CKS1BP61024 79 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 FAM19A2Q8N3H0 131 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 ANKRD29Q8N6D5 301 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 SPRR4Q96PI1 79 aa3.74□□□□□ -1.81
VCAN-206ENST00000505615 IGKV2-28A0A075B6P5 120 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 A0A0J9YXY3 114 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 A0A1B0GV90 55 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 TMEM250H0YL14 139 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 SERF1AO75920 110 aa3.73□□□□□ -1.81
VCAN-206ENST00000505615 IGKV2D-28P01615 120 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms