RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 COMMD7Q86VX2 200 aa7.04□□□□□ -1.28
SNHG4-202ENST00000505522 C3orf22Q8N5N4 141 aa7.04□□□□□ -1.28
SNHG4-202ENST00000505522 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
SNHG4-202ENST00000505522 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
SNHG4-202ENST00000505522 C10orf91Q5T1B1 145 aa7.03□□□□□ -1.28
SNHG4-202ENST00000505522 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
SNHG4-202ENST00000505522 BAGE3Q86Y29 109 aa7.03□□□□□ -1.28
SNHG4-202ENST00000505522 CBLN2Q8IUK8 224 aa7.03□□□□□ -1.28
SNHG4-202ENST00000505522 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
SNHG4-202ENST00000505522 RHEBQ15382 184 aa7.02□□□□□ -1.29
SNHG4-202ENST00000505522 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
SNHG4-202ENST00000505522 TRAPPC1Q9Y5R8 145 aa7.02□□□□□ -1.29
SNHG4-202ENST00000505522 HIGD2AQ9BW72 106 aa7.01□□□□□ -1.29
SNHG4-202ENST00000505522 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
SNHG4-202ENST00000505522 CDIP1Q9H305 208 aa7.01□□□□□ -1.29
SNHG4-202ENST00000505522 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
SNHG4-202ENST00000505522 A0A0U1RRA0 63 aa7□□□□□ -1.29
SNHG4-202ENST00000505522 LINC00158P58513 81 aa7□□□□□ -1.29
SNHG4-202ENST00000505522 CTAG1AP78358 180 aa7□□□□□ -1.29
SNHG4-202ENST00000505522 SFTA2Q6UW10 78 aa7□□□□□ -1.29
SNHG4-202ENST00000505522 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
SNHG4-202ENST00000505522 CHTOPQ9Y3Y2 248 aaKnown RBP6.99□□□□□ -1.29
SNHG4-202ENST00000505522 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
SNHG4-202ENST00000505522 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
SNHG4-202ENST00000505522 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
SNHG4-202ENST00000505522 SMIM13P0DJ93 91 aa6.97□□□□□ -1.29
SNHG4-202ENST00000505522 PRYO14603 147 aa6.95□□□□□ -1.3
SNHG4-202ENST00000505522 NCR3O14931 201 aa6.95□□□□□ -1.3
SNHG4-202ENST00000505522 SPAG11AQ6PDA7 123 aa6.95□□□□□ -1.3
SNHG4-202ENST00000505522 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
SNHG4-202ENST00000505522 TRAV12-1A0A0B4J245 112 aa6.94□□□□□ -1.3
SNHG4-202ENST00000505522 MIR7-3HGQ8N6C7 128 aa6.94□□□□□ -1.3
SNHG4-202ENST00000505522 DAND5Q8N907 189 aa6.94□□□□□ -1.3
SNHG4-202ENST00000505522 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
SNHG4-202ENST00000505522 ZNF706Q9Y5V0 76 aaPredicted RBP6.94□□□□□ -1.3
SNHG4-202ENST00000505522 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
SNHG4-202ENST00000505522 ATP6V1G1O75348 118 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 APOC3P02656 99 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 SPRR1AP35321 89 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 MEIG1Q5JSS6 88 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 Q8NBF4 154 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 SMCR5Q8TEV8 140 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 KCNQ1DNQ9H478 68 aa6.93□□□□□ -1.3
SNHG4-202ENST00000505522 C4orf48Q5BLP8 95 aa6.92□□□□□ -1.3
SNHG4-202ENST00000505522 FP248Q71RG6 208 aaPredicted RBP6.92□□□□□ -1.3
SNHG4-202ENST00000505522 CHCHD1Q96BP2 118 aaKnown RBP6.92□□□□□ -1.3
SNHG4-202ENST00000505522 TRBV10-3A0A0K0K1G6 114 aa6.91□□□□□ -1.3
SNHG4-202ENST00000505522 SNAPINO95295 136 aa6.91□□□□□ -1.3
SNHG4-202ENST00000505522 HERV-K104P63124 156 aa6.91□□□□□ -1.3
SNHG4-202ENST00000505522 YPEL4Q96NS1 127 aa6.91□□□□□ -1.3
SNHG4-202ENST00000505522 NDUFA12Q9UI09 145 aa6.91□□□□□ -1.3
SNHG4-202ENST00000505522 ETDCA0A1B0GVM5 59 aa6.9□□□□□ -1.3
SNHG4-202ENST00000505522 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
SNHG4-202ENST00000505522 FAM19A2Q8N3H0 131 aa6.9□□□□□ -1.3
SNHG4-202ENST00000505522 LINC00483Q53H64 154 aa6.89□□□□□ -1.31
SNHG4-202ENST00000505522 SVBPQ8N300 66 aa6.89□□□□□ -1.31
SNHG4-202ENST00000505522 B5MCH6 92 aa6.88□□□□□ -1.31
SNHG4-202ENST00000505522 SPINK1P00995 79 aa6.88□□□□□ -1.31
SNHG4-202ENST00000505522 TSPEAR-AS2P59090 65 aa6.88□□□□□ -1.31
SNHG4-202ENST00000505522 GAGE2AQ6NT46 116 aa6.88□□□□□ -1.31
SNHG4-202ENST00000505522 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
SNHG4-202ENST00000505522 LINC00587B1AMM8 73 aa6.87□□□□□ -1.31
SNHG4-202ENST00000505522 H0Y8G0 127 aa6.87□□□□□ -1.31
SNHG4-202ENST00000505522 ERC2-IT1O76042 136 aa6.87□□□□□ -1.31
SNHG4-202ENST00000505522 NDUFA5Q16718 116 aa6.87□□□□□ -1.31
SNHG4-202ENST00000505522 HSBP1O75506 76 aa6.86□□□□□ -1.31
SNHG4-202ENST00000505522 MAP1LC3CQ9BXW4 147 aa6.86□□□□□ -1.31
SNHG4-202ENST00000505522 IGLV9-49A0A0B4J1Y8 123 aa6.85□□□□□ -1.31
SNHG4-202ENST00000505522 LOC107984156A0A0G2JMH3 177 aa6.85□□□□□ -1.31
SNHG4-202ENST00000505522 DDTP30046 118 aa6.85□□□□□ -1.31
SNHG4-202ENST00000505522 MOBPQ13875 183 aa6.85□□□□□ -1.31
SNHG4-202ENST00000505522 ASB16-AS1Q495Z4 193 aa6.85□□□□□ -1.31
SNHG4-202ENST00000505522 ARL17AQ8IVW1 177 aa6.85□□□□□ -1.31
SNHG4-202ENST00000505522 Q9BRP9 147 aa6.85□□□□□ -1.31
SNHG4-202ENST00000505522 LEPROTO15243 131 aa6.84□□□□□ -1.31
SNHG4-202ENST00000505522 S100A12P80511 92 aa6.84□□□□□ -1.31
SNHG4-202ENST00000505522 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.31
SNHG4-202ENST00000505522 TRBV10-2A0A0K0K1G8 114 aa6.83□□□□□ -1.32
SNHG4-202ENST00000505522 LINC00310P59036 64 aa6.83□□□□□ -1.32
SNHG4-202ENST00000505522 Q8N377 158 aa6.83□□□□□ -1.32
SNHG4-202ENST00000505522 J3QQQ9 107 aa6.82□□□□□ -1.32
SNHG4-202ENST00000505522 LEPROTL1O95214 131 aa6.82□□□□□ -1.32
SNHG4-202ENST00000505522 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
SNHG4-202ENST00000505522 Q6ZRX8 168 aa6.82□□□□□ -1.32
SNHG4-202ENST00000505522 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
SNHG4-202ENST00000505522 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
SNHG4-202ENST00000505522 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
SNHG4-202ENST00000505522 SERF1AO75920 110 aa6.81□□□□□ -1.32
SNHG4-202ENST00000505522 TRGC2P03986 189 aa6.81□□□□□ -1.32
SNHG4-202ENST00000505522 IGLV6-57P01721 117 aa6.8□□□□□ -1.32
SNHG4-202ENST00000505522 PLNP26678 52 aa6.8□□□□□ -1.32
SNHG4-202ENST00000505522 PMCHL2Q9BQD1 86 aa6.8□□□□□ -1.32
SNHG4-202ENST00000505522 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
SNHG4-202ENST00000505522 DPM2O94777 84 aa6.79□□□□□ -1.32
SNHG4-202ENST00000505522 NDUFC2O95298 119 aa6.79□□□□□ -1.32
SNHG4-202ENST00000505522 NMUP48645 174 aa6.79□□□□□ -1.32
SNHG4-202ENST00000505522 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
SNHG4-202ENST00000505522 S100A7L2Q5SY68 101 aa6.79□□□□□ -1.32
SNHG4-202ENST00000505522 SOSTDC1Q6X4U4 206 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms