RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 TMEM238C9JI98 176 aa11.64□□□□□ -0.55
UBE2D3-220ENST00000505307 M0R378 163 aa11.64□□□□□ -0.55
UBE2D3-220ENST00000505307 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-220ENST00000505307 SNAPINO95295 136 aa11.62□□□□□ -0.55
UBE2D3-220ENST00000505307 LINC00158P58513 81 aa11.62□□□□□ -0.55
UBE2D3-220ENST00000505307 NDUFA5Q16718 116 aa11.62□□□□□ -0.55
UBE2D3-220ENST00000505307 APOC3P02656 99 aa11.61□□□□□ -0.55
UBE2D3-220ENST00000505307 CBLN2Q8IUK8 224 aa11.61□□□□□ -0.55
UBE2D3-220ENST00000505307 SVBPQ8N300 66 aa11.61□□□□□ -0.55
UBE2D3-220ENST00000505307 PLEKHB2Q96CS7 222 aa11.61□□□□□ -0.55
UBE2D3-220ENST00000505307 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
UBE2D3-220ENST00000505307 Q8NDZ9 215 aa11.6□□□□□ -0.55
UBE2D3-220ENST00000505307 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
UBE2D3-220ENST00000505307 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
UBE2D3-220ENST00000505307 IFI27L1Q96BM0 104 aa11.58□□□□□ -0.56
UBE2D3-220ENST00000505307 ATP6V1G1O75348 118 aa11.57□□□□□ -0.56
UBE2D3-220ENST00000505307 HIGD2AQ9BW72 106 aa11.56□□□□□ -0.56
UBE2D3-220ENST00000505307 LINC00587B1AMM8 73 aa11.55□□□□□ -0.56
UBE2D3-220ENST00000505307 HERV-K104P63124 156 aa11.55□□□□□ -0.56
UBE2D3-220ENST00000505307 RETNLBQ9BQ08 111 aa11.55□□□□□ -0.56
UBE2D3-220ENST00000505307 TPRXLQ17RH7 258 aa11.54□□□□□ -0.56
UBE2D3-220ENST00000505307 SPAG11AQ6PDA7 123 aa11.54□□□□□ -0.56
UBE2D3-220ENST00000505307 ZNF706Q9Y5V0 76 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-220ENST00000505307 A0A0U1RRA0 63 aa11.53□□□□□ -0.56
UBE2D3-220ENST00000505307 PRYO14603 147 aa11.52□□□□□ -0.57
UBE2D3-220ENST00000505307 SMIM13P0DJ93 91 aa11.52□□□□□ -0.57
UBE2D3-220ENST00000505307 MEIG1Q5JSS6 88 aa11.52□□□□□ -0.57
UBE2D3-220ENST00000505307 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.57
UBE2D3-220ENST00000505307 SPRR4Q96PI1 79 aa11.52□□□□□ -0.57
UBE2D3-220ENST00000505307 IGLV7-46A0A075B6I9 117 aa11.51□□□□□ -0.57
UBE2D3-220ENST00000505307 C3orf22Q8N5N4 141 aa11.51□□□□□ -0.57
UBE2D3-220ENST00000505307 YPEL4Q96NS1 127 aa11.51□□□□□ -0.57
UBE2D3-220ENST00000505307 CDIP1Q9H305 208 aa11.51□□□□□ -0.57
UBE2D3-220ENST00000505307 LINC00337Q8N6G1 96 aa11.5□□□□□ -0.57
UBE2D3-220ENST00000505307 HSBP1O75506 76 aa11.49□□□□□ -0.57
UBE2D3-220ENST00000505307 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
UBE2D3-220ENST00000505307 MAP1LC3CQ9BXW4 147 aa11.49□□□□□ -0.57
UBE2D3-220ENST00000505307 KCNQ1DNQ9H478 68 aa11.49□□□□□ -0.57
UBE2D3-220ENST00000505307 MYMXA0A1B0GTQ4 84 aa11.48□□□□□ -0.57
UBE2D3-220ENST00000505307 SPRR1AP35321 89 aa11.48□□□□□ -0.57
UBE2D3-220ENST00000505307 NDUFA12Q9UI09 145 aa11.48□□□□□ -0.57
UBE2D3-220ENST00000505307 S100A12P80511 92 aa11.47□□□□□ -0.57
UBE2D3-220ENST00000505307 C4orf48Q5BLP8 95 aa11.47□□□□□ -0.57
UBE2D3-220ENST00000505307 ETDCA0A1B0GVM5 59 aa11.45□□□□□ -0.58
UBE2D3-220ENST00000505307 NCR3O14931 201 aa11.45□□□□□ -0.58
UBE2D3-220ENST00000505307 FAM19A2Q8N3H0 131 aa11.44□□□□□ -0.58
UBE2D3-220ENST00000505307 KRTAP4-16G5E9R7 235 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-220ENST00000505307 FP248Q71RG6 208 aaPredicted RBP11.43□□□□□ -0.58
UBE2D3-220ENST00000505307 SMCR5Q8TEV8 140 aa11.43□□□□□ -0.58
UBE2D3-220ENST00000505307 PPDPFQ9H3Y8 114 aa11.43□□□□□ -0.58
UBE2D3-220ENST00000505307 LOC107984156A0A0G2JMH3 177 aa11.42□□□□□ -0.58
UBE2D3-220ENST00000505307 TRBV10-3A0A0K0K1G6 114 aa11.42□□□□□ -0.58
UBE2D3-220ENST00000505307 ARL17AQ8IVW1 177 aa11.42□□□□□ -0.58
UBE2D3-220ENST00000505307 LEPROTL1O95214 131 aa11.41□□□□□ -0.58
UBE2D3-220ENST00000505307 LEPROTO15243 131 aa11.4□□□□□ -0.58
UBE2D3-220ENST00000505307 PLNP26678 52 aa11.4□□□□□ -0.58
UBE2D3-220ENST00000505307 TRBV10-2A0A0K0K1G8 114 aa11.39□□□□□ -0.59
UBE2D3-220ENST00000505307 H0Y8G0 127 aa11.39□□□□□ -0.59
UBE2D3-220ENST00000505307 LINC00483Q53H64 154 aa11.39□□□□□ -0.59
UBE2D3-220ENST00000505307 Q8NBF4 154 aa11.39□□□□□ -0.59
UBE2D3-220ENST00000505307 SPINK1P00995 79 aa11.38□□□□□ -0.59
UBE2D3-220ENST00000505307 TRGC2P03986 189 aa11.37□□□□□ -0.59
UBE2D3-220ENST00000505307 NMUP48645 174 aa11.37□□□□□ -0.59
UBE2D3-220ENST00000505307 HERVK_113P61574 105 aa11.37□□□□□ -0.59
UBE2D3-220ENST00000505307 HSPB8Q9UJY1 196 aa11.37□□□□□ -0.59
UBE2D3-220ENST00000505307 FAT4Q6V0I7 4981 aa11.36□□□□□ -0.59
UBE2D3-220ENST00000505307 B5MCH6 92 aa11.36□□□□□ -0.59
UBE2D3-220ENST00000505307 DDTP30046 118 aa11.36□□□□□ -0.59
UBE2D3-220ENST00000505307 J3QQQ9 107 aa11.35□□□□□ -0.59
UBE2D3-220ENST00000505307 SERF1AO75920 110 aa11.35□□□□□ -0.59
UBE2D3-220ENST00000505307 TSPEAR-AS2P59090 65 aa11.35□□□□□ -0.59
UBE2D3-220ENST00000505307 DAND5Q8N907 189 aa11.35□□□□□ -0.59
UBE2D3-220ENST00000505307 MIEN1Q9BRT3 115 aa11.35□□□□□ -0.59
UBE2D3-220ENST00000505307 DPM2O94777 84 aa11.34□□□□□ -0.59
UBE2D3-220ENST00000505307 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-220ENST00000505307 MUC17Q685J3 4493 aa11.33□□□□□ -0.6
UBE2D3-220ENST00000505307 LCE2AQ5TA79 106 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-220ENST00000505307 GAGE2AQ6NT46 116 aa11.33□□□□□ -0.6
UBE2D3-220ENST00000505307 NDUFC2O95298 119 aa11.32□□□□□ -0.6
UBE2D3-220ENST00000505307 LGALS3P17931 250 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-220ENST00000505307 LINC00310P59036 64 aa11.32□□□□□ -0.6
UBE2D3-220ENST00000505307 SSBP3-AS1Q7Z2R9 100 aa11.32□□□□□ -0.6
UBE2D3-220ENST00000505307 KRTAP9-2Q9BYQ4 174 aa11.32□□□□□ -0.6
UBE2D3-220ENST00000505307 RPS29P62273 56 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-220ENST00000505307 Q6ZRX8 168 aa11.31□□□□□ -0.6
UBE2D3-220ENST00000505307 IGKCP01834 107 aa11.3□□□□□ -0.6
UBE2D3-220ENST00000505307 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
UBE2D3-220ENST00000505307 IGLV6-57P01721 117 aa11.29□□□□□ -0.6
UBE2D3-220ENST00000505307 FABP4P15090 132 aa11.29□□□□□ -0.6
UBE2D3-220ENST00000505307 JOSD1Q15040 202 aaPredicted RBP11.29□□□□□ -0.6
UBE2D3-220ENST00000505307 KRTAP13-3Q3SY46 172 aa11.29□□□□□ -0.6
UBE2D3-220ENST00000505307 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
UBE2D3-220ENST00000505307 Q9BRP9 147 aa11.28□□□□□ -0.6
UBE2D3-220ENST00000505307 MOBPQ13875 183 aa11.27□□□□□ -0.61
UBE2D3-220ENST00000505307 IGLV9-49A0A0B4J1Y8 123 aa11.26□□□□□ -0.61
UBE2D3-220ENST00000505307 PMCHL2Q9BQD1 86 aa11.26□□□□□ -0.61
UBE2D3-220ENST00000505307 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
UBE2D3-220ENST00000505307 TRAV23DV6A0A075B6W5 121 aa11.24□□□□□ -0.61
UBE2D3-220ENST00000505307 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
UBE2D3-220ENST00000505307 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms