RNA–Protein interactions for RNA: ENST00000505187.5

SPOCK3-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2

Gene SPOCK3, Length 1,588 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-208	ENST00000505187	NHP2	Q9NX24	153 aa	Known RBP	13.6	□□□□□ -0.23
SPOCK3-208	ENST00000505187	HYDIN	Q4G0P3	5121 aa		13.6	□□□□□ -0.23
SPOCK3-208	ENST00000505187	DNAH17	Q9UFH2	4485 aa		13.59	□□□□□ -0.23
SPOCK3-208	ENST00000505187		A0A0B4J2C4	111 aa		13.59	□□□□□ -0.23
SPOCK3-208	ENST00000505187	C16orf90	A8MZG2	172 aa		13.58	□□□□□ -0.23
SPOCK3-208	ENST00000505187	CFC1B	P0CG36	223 aa		13.58	□□□□□ -0.24
SPOCK3-208	ENST00000505187	CFC1	P0CG37	223 aa		13.58	□□□□□ -0.24
SPOCK3-208	ENST00000505187	FRAS1	Q86XX4	4008 aa		13.57	□□□□□ -0.24
SPOCK3-208	ENST00000505187	IGLV5-52	A0A0A0MRZ9	124 aa		13.57	□□□□□ -0.24
SPOCK3-208	ENST00000505187	GAGE2B	Q13066	116 aa		13.57	□□□□□ -0.24
SPOCK3-208	ENST00000505187	C9orf129	Q5T035	196 aa	Known RBP	13.57	□□□□□ -0.24
SPOCK3-208	ENST00000505187	SDIM1	Q6ZPB5	146 aa		13.57	□□□□□ -0.24
SPOCK3-208	ENST00000505187	PLA2G2D	Q9UNK4	145 aa		13.57	□□□□□ -0.24
SPOCK3-208	ENST00000505187	LBH	Q53QV2	105 aa	Predicted RBP	13.56	□□□□□ -0.24
SPOCK3-208	ENST00000505187	COL5A1-AS1	Q5SY13	56 aa		13.56	□□□□□ -0.24
SPOCK3-208	ENST00000505187	RAB37	Q96AX2	223 aa		13.55	□□□□□ -0.24
SPOCK3-208	ENST00000505187		A0A096LNI7	61 aa		13.54	□□□□□ -0.24
SPOCK3-208	ENST00000505187	PGPEP1	Q9NXJ5	209 aa		13.54	□□□□□ -0.24
SPOCK3-208	ENST00000505187	IGKV2-28	A0A075B6P5	120 aa		13.53	□□□□□ -0.24
SPOCK3-208	ENST00000505187	IGKV2D-28	P01615	120 aa		13.53	□□□□□ -0.24
SPOCK3-208	ENST00000505187	LINC00474	Q9P2X8	69 aa		13.53	□□□□□ -0.24
SPOCK3-208	ENST00000505187	PRO1854	Q9UHT4	67 aa		13.53	□□□□□ -0.24
SPOCK3-208	ENST00000505187	TRAV13-2	A0A0B4J235	113 aa		13.52	□□□□□ -0.25
SPOCK3-208	ENST00000505187	TRBV10-2	A0A0K0K1G8	114 aa		13.52	□□□□□ -0.25
SPOCK3-208	ENST00000505187		K7ERJ3	54 aa		13.52	□□□□□ -0.25
SPOCK3-208	ENST00000505187	VPREB1	P12018	145 aa		13.52	□□□□□ -0.25
SPOCK3-208	ENST00000505187		Q8NDZ9	215 aa		13.51	□□□□□ -0.25
SPOCK3-208	ENST00000505187	RYR2	Q92736	4967 aa		13.5	□□□□□ -0.25
SPOCK3-208	ENST00000505187	IGLV5-37	A0A075B6J1	123 aa		13.49	□□□□□ -0.25
SPOCK3-208	ENST00000505187	KRTAP10-2	P60368	255 aa		13.49	□□□□□ -0.25
SPOCK3-208	ENST00000505187	LINC01620	Q4KN68	170 aa		13.49	□□□□□ -0.25
SPOCK3-208	ENST00000505187	IGKV2-24	A0A0C4DH68	120 aa		13.49	□□□□□ -0.25
SPOCK3-208	ENST00000505187	LINC00337	Q8N6G1	96 aa		13.49	□□□□□ -0.25
SPOCK3-208	ENST00000505187	NCR3	O14931	201 aa		13.46	□□□□□ -0.25
SPOCK3-208	ENST00000505187	FUS	P35637	526 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
SPOCK3-208	ENST00000505187	HECTD4	Q9Y4D8	3996 aa		13.46	□□□□□ -0.26
SPOCK3-208	ENST00000505187		M0R378	163 aa		13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	TAX1BP3	O14907	124 aa		13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	RPL13A	P40429	203 aa	Known RBP	13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	PRR3	P79522	188 aa	Known RBP	13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	SERTAD4-AS1	Q5TG53	156 aa		13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	NKAPP1	Q8N9T2	125 aa		13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	CHTF8	P0CG12	524 aa		13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	TMEM126A	Q9H061	195 aa		13.45	□□□□□ -0.26
SPOCK3-208	ENST00000505187	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.44	□□□□□ -0.26
SPOCK3-208	ENST00000505187	SPACA4	Q8TDM5	124 aa		13.44	□□□□□ -0.26
SPOCK3-208	ENST00000505187	FAM168B	A1KXE4	195 aa		13.43	□□□□□ -0.26
SPOCK3-208	ENST00000505187	S100A7L2	Q5SY68	101 aa		13.42	□□□□□ -0.26
SPOCK3-208	ENST00000505187	KRTAP7-1	Q8IUC3	87 aa		13.42	□□□□□ -0.26
SPOCK3-208	ENST00000505187	OR13C6P	Q8NH95	151 aa		13.42	□□□□□ -0.26
SPOCK3-208	ENST00000505187	TSPAN13	O95857	204 aa		13.41	□□□□□ -0.26
SPOCK3-208	ENST00000505187		A0A1B0GVY2	172 aa		13.41	□□□□□ -0.26
SPOCK3-208	ENST00000505187	C9orf118	A6NHY6	69 aa		13.41	□□□□□ -0.26
SPOCK3-208	ENST00000505187	IGLV6-57	P01721	117 aa		13.41	□□□□□ -0.26
SPOCK3-208	ENST00000505187	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.41	□□□□□ -0.26
SPOCK3-208	ENST00000505187	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	13.41	□□□□□ -0.26
SPOCK3-208	ENST00000505187	FAT2	Q9NYQ8	4349 aa		13.4	□□□□□ -0.26
SPOCK3-208	ENST00000505187	CBY1	Q9Y3M2	126 aa		13.4	□□□□□ -0.26
SPOCK3-208	ENST00000505187	C22orf24	Q9Y442	160 aa		13.4	□□□□□ -0.26
SPOCK3-208	ENST00000505187		A0A1W2PNN7	141 aa		13.39	□□□□□ -0.27
SPOCK3-208	ENST00000505187	EPM2A	B3EWF7	344 aa		13.39	□□□□□ -0.27
SPOCK3-208	ENST00000505187		Q1RN00	199 aa		13.39	□□□□□ -0.27
SPOCK3-208	ENST00000505187	DNAH11	Q96DT5	4516 aa		13.38	□□□□□ -0.27
SPOCK3-208	ENST00000505187		H7C2G1	150 aa		13.38	□□□□□ -0.27
SPOCK3-208	ENST00000505187	PANO1	I0J062	215 aa		13.38	□□□□□ -0.27
SPOCK3-208	ENST00000505187	C7orf33	Q8WU49	177 aa		13.38	□□□□□ -0.27
SPOCK3-208	ENST00000505187	MRPL55	Q7Z7F7	128 aa	Known RBP	13.37	□□□□□ -0.27
SPOCK3-208	ENST00000505187	TRBV10-3	A0A0K0K1G6	114 aa		13.37	□□□□□ -0.27
SPOCK3-208	ENST00000505187		M0QXV9	152 aa		13.37	□□□□□ -0.27
SPOCK3-208	ENST00000505187	RPL28	P46779	137 aa	Known RBP	13.37	□□□□□ -0.27
SPOCK3-208	ENST00000505187		H3BUT2	72 aa		13.35	□□□□□ -0.27
SPOCK3-208	ENST00000505187	DPH3	Q96FX2	82 aa		13.35	□□□□□ -0.27
SPOCK3-208	ENST00000505187	SMIM11B	Q8TCY0	68 aa		13.34	□□□□□ -0.27
SPOCK3-208	ENST00000505187	LINC00167	Q96N53	147 aa		13.34	□□□□□ -0.27
SPOCK3-208	ENST00000505187		A0A087WYN8	130 aa		13.33	□□□□□ -0.28
SPOCK3-208	ENST00000505187		Q6ZSA8	131 aa		13.33	□□□□□ -0.28
SPOCK3-208	ENST00000505187	PLAC8	Q9NZF1	115 aa		13.33	□□□□□ -0.28
SPOCK3-208	ENST00000505187	PSMB2	P49721	201 aa		13.32	□□□□□ -0.28
SPOCK3-208	ENST00000505187	KRTAP10-1	P60331	282 aa		13.32	□□□□□ -0.28
SPOCK3-208	ENST00000505187	GAGE10	A6NGK3	116 aa		13.32	□□□□□ -0.28
SPOCK3-208	ENST00000505187	NAA38	Q9BRA0	125 aa	Known RBP	13.32	□□□□□ -0.28
SPOCK3-208	ENST00000505187	PKD1	P98161	4303 aa		13.31	□□□□□ -0.28
SPOCK3-208	ENST00000505187	IGLV1-50	A0A075B6I6	118 aa		13.31	□□□□□ -0.28
SPOCK3-208	ENST00000505187	TRAV23DV6	A0A075B6W5	121 aa		13.31	□□□□□ -0.28
SPOCK3-208	ENST00000505187	LYRM7	Q5U5X0	104 aa		13.31	□□□□□ -0.28
SPOCK3-208	ENST00000505187	KCNQ1DN	Q9H478	68 aa		13.31	□□□□□ -0.28
SPOCK3-208	ENST00000505187		A0A1W2PPM0	123 aa		13.3	□□□□□ -0.28
SPOCK3-208	ENST00000505187	TRIAP1	O43715	76 aa		13.3	□□□□□ -0.28
SPOCK3-208	ENST00000505187	COX6C	P09669	75 aa		13.3	□□□□□ -0.28
SPOCK3-208	ENST00000505187	PRY	O14603	147 aa		13.29	□□□□□ -0.28
SPOCK3-208	ENST00000505187	DNAH5	Q8TE73	4624 aa		13.28	□□□□□ -0.28
SPOCK3-208	ENST00000505187	FABP2	P12104	132 aa		13.28	□□□□□ -0.28
SPOCK3-208	ENST00000505187	PHF5A	Q7RTV0	110 aa	Known RBP	13.28	□□□□□ -0.28
SPOCK3-208	ENST00000505187	RPL37AP8	A6NKH3	93 aa		13.26	□□□□□ -0.29
SPOCK3-208	ENST00000505187	ZNF73	O43830	326 aa	Predicted RBP	13.26	□□□□□ -0.29
SPOCK3-208	ENST00000505187	FAM30A	Q9NZY2	134 aa		13.26	□□□□□ -0.29
SPOCK3-208	ENST00000505187	SCGB1C2	P0DMR2	95 aa		13.25	□□□□□ -0.29
SPOCK3-208	ENST00000505187	C6orf99	Q4VX62	202 aa		13.25	□□□□□ -0.29
SPOCK3-208	ENST00000505187	DIRC1	Q969H9	104 aa		13.25	□□□□□ -0.29
SPOCK3-208	ENST00000505187	TRBV7-6	A0A0J9YX20	115 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms