RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ORMDL2Q53FV1 153 aa3.36□□□□□ -1.87
GYPB-204ENST00000504951 Q8NDZ9 215 aa3.36□□□□□ -1.87
GYPB-204ENST00000504951 COX7B2Q8TF08 81 aa3.36□□□□□ -1.87
GYPB-204ENST00000504951 IGLV5-45A0A087WSX0 123 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 SPINK8P0C7L1 97 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 UBE2AP49459 152 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 KIAA1644Q3SXP7 199 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 PDZD11Q5EBL8 140 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 C3orf22Q8N5N4 141 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 TOMM6Q96B49 74 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
GYPB-204ENST00000504951 NXT2Q9NPJ8 142 aaKnown RBP3.35□□□□□ -1.87
GYPB-204ENST00000504951 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 K7EMI3 77 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 SPINK1P00995 79 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 CXCL5P42830 114 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 RPS29P62273 56 aaKnown RBP3.34□□□□□ -1.87
GYPB-204ENST00000504951 SEC11AP67812 179 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 ERASQ7Z444 233 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 GNB1LQ9BYB4 327 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 CST9LQ9H4G1 147 aa3.34□□□□□ -1.87
GYPB-204ENST00000504951 FLGP20930 4061 aaPredicted RBP3.34□□□□□ -1.88
GYPB-204ENST00000504951 M0R378 163 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 VPREB1P12018 145 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 PFN2P35080 140 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 FAM19A1Q7Z5A9 133 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 NKAPP1Q8N9T2 125 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 PLEKHB2Q96CS7 222 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 SND1-IT1Q9HBX3 110 aa3.33□□□□□ -1.88
GYPB-204ENST00000504951 MT-ND4LP03901 98 aa3.32□□□□□ -1.88
GYPB-204ENST00000504951 DAND5Q8N907 189 aa3.32□□□□□ -1.88
GYPB-204ENST00000504951 IGLV5-39A0A0G2JS06 123 aa3.31□□□□□ -1.88
GYPB-204ENST00000504951 LINC01546A6NGU7 62 aa3.31□□□□□ -1.88
GYPB-204ENST00000504951 ATP5LO75964 103 aa3.31□□□□□ -1.88
GYPB-204ENST00000504951 RAB14P61106 215 aa3.31□□□□□ -1.88
GYPB-204ENST00000504951 PMVKQ15126 192 aa3.31□□□□□ -1.88
GYPB-204ENST00000504951 FAM19A2Q8N3H0 131 aa3.31□□□□□ -1.88
GYPB-204ENST00000504951 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
GYPB-204ENST00000504951 A0A096LNJ9 63 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 IGLC3P0DOY3 106 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 ZNF22P17026 224 aaPredicted RBP3.3□□□□□ -1.88
GYPB-204ENST00000504951 G0S2P27469 103 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 CBLN2Q8IUK8 224 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 SPRR4Q96PI1 79 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 HIGD2AQ9BW72 106 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 NDUFA12Q9UI09 145 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 ERG28Q9UKR5 140 aa3.3□□□□□ -1.88
GYPB-204ENST00000504951 H3BRM9 83 aa3.29□□□□□ -1.88
GYPB-204ENST00000504951 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
GYPB-204ENST00000504951 URB1-AS1Q96HZ7 61 aa3.29□□□□□ -1.88
GYPB-204ENST00000504951 C11orf86A6NJI1 115 aa3.28□□□□□ -1.88
GYPB-204ENST00000504951 CFC1P0CG37 223 aa3.28□□□□□ -1.88
GYPB-204ENST00000504951 NDUFA6P56556 154 aa3.28□□□□□ -1.88
GYPB-204ENST00000504951 PMCHL1Q16048 86 aa3.28□□□□□ -1.88
GYPB-204ENST00000504951 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
GYPB-204ENST00000504951 Q8N377 158 aa3.28□□□□□ -1.88
GYPB-204ENST00000504951 Q8NBF4 154 aa3.28□□□□□ -1.88
GYPB-204ENST00000504951 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
GYPB-204ENST00000504951 A0A0U1RRA0 63 aa3.27□□□□□ -1.89
GYPB-204ENST00000504951 SLC25A20O43772 301 aa3.27□□□□□ -1.89
GYPB-204ENST00000504951 RPL24P83731 157 aaKnown RBP3.27□□□□□ -1.89
GYPB-204ENST00000504951 COX17Q14061 63 aa3.27□□□□□ -1.89
GYPB-204ENST00000504951 C21orf62-AS1Q17RA5 79 aa3.27□□□□□ -1.89
GYPB-204ENST00000504951 FA2HQ7L5A8 372 aa3.27□□□□□ -1.89
GYPB-204ENST00000504951 SSBP3-AS1Q7Z2R9 100 aa3.27□□□□□ -1.89
GYPB-204ENST00000504951 TRAV9-1A0A075B6T8 112 aa3.26□□□□□ -1.89
GYPB-204ENST00000504951 LINC01549A6NIU2 74 aa3.26□□□□□ -1.89
GYPB-204ENST00000504951 KRTAP4-16G5E9R7 235 aaPredicted RBP3.26□□□□□ -1.89
GYPB-204ENST00000504951 M0R2T5 61 aa3.26□□□□□ -1.89
GYPB-204ENST00000504951 SPRR1AP35321 89 aa3.26□□□□□ -1.89
GYPB-204ENST00000504951 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
GYPB-204ENST00000504951 Q8N9P0 234 aaPredicted RBP3.26□□□□□ -1.89
GYPB-204ENST00000504951 SMCR5Q8TEV8 140 aa3.26□□□□□ -1.89
GYPB-204ENST00000504951 SMCO4Q9NRQ5 59 aa3.26□□□□□ -1.89
GYPB-204ENST00000504951 ZNF706Q9Y5V0 76 aaPredicted RBP3.26□□□□□ -1.89
GYPB-204ENST00000504951 IGLV8-61A0A075B6I0 122 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 TMEM218A2RU14 115 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 NCR3O14931 201 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 ERC2-IT1O76042 136 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 LINC00158P58513 81 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 FABP9Q0Z7S8 132 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 TMEM170BQ5T4T1 132 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 BAGE3Q86Y29 109 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 C18orf32Q8TCD1 76 aa3.25□□□□□ -1.89
GYPB-204ENST00000504951 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 TRBV10-3A0A0K0K1G6 114 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 B5MCH6 92 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 PRYO14603 147 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 HBDP02042 147 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 LINC00614P0C842 121 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 SMIM13P0DJ93 91 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 LINC00483Q53H64 154 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 PCOTHQ58A44 107 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 CLLU1Q5K131 121 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 GAGE2AQ6NT46 116 aa3.24□□□□□ -1.89
GYPB-204ENST00000504951 BOD1L2Q8IYS8 172 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms