RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NXT2Q9NPJ8 142 aaKnown RBP3.92□□□□□ -1.78
NPIPB3-203ENST00000504841 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
NPIPB3-203ENST00000504841 SNAPINO95295 136 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 NPSP0C0P6 89 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 CXCL5P42830 114 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 KRTAP13-3Q3SY46 172 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 ASB16-AS1Q495Z4 193 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 SVBPQ8N300 66 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 AMELXQ99217 191 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 MAP1LC3AQ9H492 121 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 RPS10P5Q9NQ39 176 aa3.91□□□□□ -1.78
NPIPB3-203ENST00000504841 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 LINC01549A6NIU2 74 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 TMEM238C9JI98 176 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 APOC3P02656 99 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 HERVK_113P63121 156 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 ORMDL2Q53FV1 153 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 FP248Q71RG6 208 aaPredicted RBP3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 Q8N8P6 123 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 DAND5Q8N907 189 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 HIGD2AQ9BW72 106 aa3.9□□□□□ -1.79
NPIPB3-203ENST00000504841 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 SEC11AP67812 179 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 CTAG1AP78358 180 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 SPAG11AQ6PDA7 123 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 CBLN2Q8IUK8 224 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 PLEKHB2Q96CS7 222 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 TMEM126AQ9H061 195 aa3.89□□□□□ -1.79
NPIPB3-203ENST00000504841 IGIPA6NJ69 53 aa3.88□□□□□ -1.79
NPIPB3-203ENST00000504841 SPINK8P0C7L1 97 aa3.88□□□□□ -1.79
NPIPB3-203ENST00000504841 PFN2P35080 140 aa3.88□□□□□ -1.79
NPIPB3-203ENST00000504841 PAPPA-AS1Q5QFB9 102 aa3.88□□□□□ -1.79
NPIPB3-203ENST00000504841 Q8NBF4 154 aa3.88□□□□□ -1.79
NPIPB3-203ENST00000504841 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
NPIPB3-203ENST00000504841 M0R378 163 aa3.87□□□□□ -1.79
NPIPB3-203ENST00000504841 ATP5LO75964 103 aa3.87□□□□□ -1.79
NPIPB3-203ENST00000504841 FABP9Q0Z7S8 132 aa3.87□□□□□ -1.79
NPIPB3-203ENST00000504841 FAM19A3Q7Z5A8 133 aa3.87□□□□□ -1.79
NPIPB3-203ENST00000504841 VPREB1P12018 145 aa3.86□□□□□ -1.79
NPIPB3-203ENST00000504841 KIAA1644Q3SXP7 199 aa3.86□□□□□ -1.79
NPIPB3-203ENST00000504841 PDZD11Q5EBL8 140 aa3.86□□□□□ -1.79
NPIPB3-203ENST00000504841 ERASQ7Z444 233 aa3.86□□□□□ -1.79
NPIPB3-203ENST00000504841 SPRR4Q96PI1 79 aa3.86□□□□□ -1.79
NPIPB3-203ENST00000504841 TRAPPC1Q9Y5R8 145 aa3.86□□□□□ -1.79
NPIPB3-203ENST00000504841 MT1HP80294 61 aa3.85□□□□□ -1.79
NPIPB3-203ENST00000504841 TOMM6Q96B49 74 aa3.85□□□□□ -1.79
NPIPB3-203ENST00000504841 TIMM17AQ99595 171 aa3.85□□□□□ -1.79
NPIPB3-203ENST00000504841 SND1-IT1Q9HBX3 110 aa3.85□□□□□ -1.79
NPIPB3-203ENST00000504841 SMCO4Q9NRQ5 59 aa3.85□□□□□ -1.79
NPIPB3-203ENST00000504841 NDUFA12Q9UI09 145 aa3.85□□□□□ -1.79
NPIPB3-203ENST00000504841 TINCRA0A1B0GVN0 87 aa3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 CFC1BP0CG36 223 aa3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 RPL24P83731 157 aaKnown RBP3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 FA2HQ7L5A8 372 aa3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 Q8NDZ9 215 aa3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 ZNF625Q96I27 306 aaPredicted RBP3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 YPEL4Q96NS1 127 aa3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 SCGB3A1Q96QR1 104 aa3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 ZNF706Q9Y5V0 76 aaPredicted RBP3.84□□□□□ -1.79
NPIPB3-203ENST00000504841 IGLV5-45A0A087WSX0 123 aa3.83□□□□□ -1.8
NPIPB3-203ENST00000504841 SPINK1P00995 79 aa3.83□□□□□ -1.8
NPIPB3-203ENST00000504841 LINC00614P0C842 121 aa3.83□□□□□ -1.8
NPIPB3-203ENST00000504841 MOBPQ13875 183 aa3.83□□□□□ -1.8
NPIPB3-203ENST00000504841 ERG28Q9UKR5 140 aa3.83□□□□□ -1.8
NPIPB3-203ENST00000504841 IGLV9-49A0A0B4J1Y8 123 aa3.82□□□□□ -1.8
NPIPB3-203ENST00000504841 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
NPIPB3-203ENST00000504841 SLC7A5P1Q8MH63 180 aa3.82□□□□□ -1.8
NPIPB3-203ENST00000504841 C18orf32Q8TCD1 76 aa3.82□□□□□ -1.8
NPIPB3-203ENST00000504841 CST9LQ9H4G1 147 aa3.82□□□□□ -1.8
NPIPB3-203ENST00000504841 H3BRM9 83 aa3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 PMVKQ15126 192 aa3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 Q8N377 158 aa3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 FAM19A2Q8N3H0 131 aa3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 SMCR5Q8TEV8 140 aa3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 CHCHD1Q96BP2 118 aaKnown RBP3.81□□□□□ -1.8
NPIPB3-203ENST00000504841 IGLV8-61A0A075B6I0 122 aa3.8□□□□□ -1.8
NPIPB3-203ENST00000504841 A0A0U1RRA0 63 aa3.8□□□□□ -1.8
NPIPB3-203ENST00000504841 M0R2T5 61 aa3.8□□□□□ -1.8
NPIPB3-203ENST00000504841 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
NPIPB3-203ENST00000504841 PCOTHQ58A44 107 aa3.8□□□□□ -1.8
NPIPB3-203ENST00000504841 NCR3O14931 201 aa3.79□□□□□ -1.8
NPIPB3-203ENST00000504841 SLC25A20O43772 301 aa3.79□□□□□ -1.8
NPIPB3-203ENST00000504841 HBDP02042 147 aa3.79□□□□□ -1.8
NPIPB3-203ENST00000504841 NDUFA6P56556 154 aa3.79□□□□□ -1.8
NPIPB3-203ENST00000504841 URB1-AS1Q96HZ7 61 aa3.79□□□□□ -1.8
NPIPB3-203ENST00000504841 A0A096LNJ9 63 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 IGLV5-39A0A0G2JS06 123 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 ETDCA0A1B0GVM5 59 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 COLCA2A8K830 154 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 PRYO14603 147 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 TRGC2P03986 189 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 ZNF22P17026 224 aaPredicted RBP3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 LINC00158P58513 81 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 C9orf153Q5TBE3 101 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 BAGE3Q86Y29 109 aa3.78□□□□□ -1.8
NPIPB3-203ENST00000504841 HSBP1O75506 76 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms