RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PMCHL2Q9BQD1 86 aa8.57□□□□□ -1.04
HOXC9-202ENST00000504557 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
HOXC9-202ENST00000504557 VPREB1P12018 145 aa8.56□□□□□ -1.04
HOXC9-202ENST00000504557 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
HOXC9-202ENST00000504557 SFTA2Q6UW10 78 aa8.56□□□□□ -1.04
HOXC9-202ENST00000504557 SMIM13P0DJ93 91 aa8.55□□□□□ -1.04
HOXC9-202ENST00000504557 RPL24P83731 157 aaKnown RBP8.55□□□□□ -1.04
HOXC9-202ENST00000504557 Q8NDZ9 215 aa8.55□□□□□ -1.04
HOXC9-202ENST00000504557 HSPB8Q9UJY1 196 aa8.55□□□□□ -1.04
HOXC9-202ENST00000504557 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
HOXC9-202ENST00000504557 TMEM238C9JI98 176 aa8.53□□□□□ -1.04
HOXC9-202ENST00000504557 NDUFA12Q9UI09 145 aa8.53□□□□□ -1.04
HOXC9-202ENST00000504557 PRLHP81277 87 aa8.52□□□□□ -1.05
HOXC9-202ENST00000504557 FAM19A1Q7Z5A9 133 aa8.52□□□□□ -1.05
HOXC9-202ENST00000504557 NCR3O14931 201 aa8.51□□□□□ -1.05
HOXC9-202ENST00000504557 PLNP26678 52 aa8.51□□□□□ -1.05
HOXC9-202ENST00000504557 TSPEAR-AS2P59090 65 aa8.51□□□□□ -1.05
HOXC9-202ENST00000504557 MIR7-3HGQ8N6C7 128 aa8.51□□□□□ -1.05
HOXC9-202ENST00000504557 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
HOXC9-202ENST00000504557 MYMXA0A1B0GTQ4 84 aa8.5□□□□□ -1.05
HOXC9-202ENST00000504557 DPM2O94777 84 aa8.5□□□□□ -1.05
HOXC9-202ENST00000504557 HERV-K104P63124 156 aa8.5□□□□□ -1.05
HOXC9-202ENST00000504557 UBR4Q5T4S7 5183 aa8.5□□□□□ -1.05
HOXC9-202ENST00000504557 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
HOXC9-202ENST00000504557 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
HOXC9-202ENST00000504557 LEPROTO15243 131 aa8.49□□□□□ -1.05
HOXC9-202ENST00000504557 IGKCP01834 107 aa8.49□□□□□ -1.05
HOXC9-202ENST00000504557 RPL13AP40429 203 aaKnown RBP8.49□□□□□ -1.05
HOXC9-202ENST00000504557 HERVK_113P61574 105 aa8.49□□□□□ -1.05
HOXC9-202ENST00000504557 DAND5Q8N907 189 aa8.49□□□□□ -1.05
HOXC9-202ENST00000504557 PLEKHB2Q96CS7 222 aa8.49□□□□□ -1.05
HOXC9-202ENST00000504557 MAP1LC3CQ9BXW4 147 aa8.49□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BKO60814 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BJP06899 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BOP23527 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BBP33778 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BDP58876 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BCP62807 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST2H2BEQ16778 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BHQ93079 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BNQ99877 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 HIST1H2BMQ99879 126 aa8.48□□□□□ -1.05
HOXC9-202ENST00000504557 A0A087X002 238 aa8.47□□□□□ -1.05
HOXC9-202ENST00000504557 J3QQQ9 107 aa8.47□□□□□ -1.05
HOXC9-202ENST00000504557 M0R378 163 aa8.47□□□□□ -1.05
HOXC9-202ENST00000504557 LGALS3P17931 250 aaKnown RBP8.47□□□□□ -1.05
HOXC9-202ENST00000504557 TSPAN13O95857 204 aa8.46□□□□□ -1.06
HOXC9-202ENST00000504557 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
HOXC9-202ENST00000504557 LINC00587B1AMM8 73 aa8.45□□□□□ -1.06
HOXC9-202ENST00000504557 CRYGAP11844 174 aa8.45□□□□□ -1.06
HOXC9-202ENST00000504557 HIGD2AQ9BW72 106 aa8.45□□□□□ -1.06
HOXC9-202ENST00000504557 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
HOXC9-202ENST00000504557 NPC2P61916 151 aa8.43□□□□□ -1.06
HOXC9-202ENST00000504557 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
HOXC9-202ENST00000504557 NMUP48645 174 aa8.41□□□□□ -1.06
HOXC9-202ENST00000504557 PRR4Q16378 134 aa8.41□□□□□ -1.06
HOXC9-202ENST00000504557 MIEN1Q9BRT3 115 aa8.41□□□□□ -1.06
HOXC9-202ENST00000504557 LRP2P98164 4655 aa8.41□□□□□ -1.06
HOXC9-202ENST00000504557 TRBV10-3A0A0K0K1G6 114 aa8.4□□□□□ -1.06
HOXC9-202ENST00000504557 PRYO14603 147 aa8.39□□□□□ -1.07
HOXC9-202ENST00000504557 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
HOXC9-202ENST00000504557 IGKV2D-26A0A0A0MRZ7 120 aa8.38□□□□□ -1.07
HOXC9-202ENST00000504557 ETDCA0A1B0GVM5 59 aa8.38□□□□□ -1.07
HOXC9-202ENST00000504557 E9PLD3 99 aa8.38□□□□□ -1.07
HOXC9-202ENST00000504557 KRTDAPP60985 99 aa8.38□□□□□ -1.07
HOXC9-202ENST00000504557 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
HOXC9-202ENST00000504557 S100A12P80511 92 aa8.37□□□□□ -1.07
HOXC9-202ENST00000504557 C3orf79P0CE67 100 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 DDTP30046 118 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 FAM229BQ4G0N7 80 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 LINC01545Q5VT33 79 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 PET117Q6UWS5 81 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 KCNQ1DNQ9H478 68 aa8.36□□□□□ -1.07
HOXC9-202ENST00000504557 C3orf22Q8N5N4 141 aa8.35□□□□□ -1.07
HOXC9-202ENST00000504557 PPDPFQ9H3Y8 114 aa8.35□□□□□ -1.07
HOXC9-202ENST00000504557 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
HOXC9-202ENST00000504557 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
HOXC9-202ENST00000504557 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
HOXC9-202ENST00000504557 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
HOXC9-202ENST00000504557 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
HOXC9-202ENST00000504557 SPANXB1Q9NS25 103 aaPredicted RBP8.34□□□□□ -1.07
HOXC9-202ENST00000504557 ZNF815PA8K554 130 aa8.33□□□□□ -1.08
HOXC9-202ENST00000504557 LINC00337Q8N6G1 96 aa8.33□□□□□ -1.08
HOXC9-202ENST00000504557 SPRR4Q96PI1 79 aa8.33□□□□□ -1.08
HOXC9-202ENST00000504557 LPAP08519 4548 aa8.33□□□□□ -1.08
HOXC9-202ENST00000504557 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
HOXC9-202ENST00000504557 SPRR1AP35321 89 aa8.32□□□□□ -1.08
HOXC9-202ENST00000504557 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
HOXC9-202ENST00000504557 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
HOXC9-202ENST00000504557 RETNLBQ9BQ08 111 aa8.32□□□□□ -1.08
HOXC9-202ENST00000504557 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
HOXC9-202ENST00000504557 COA6Q5JTJ3 125 aaKnown RBP8.31□□□□□ -1.08
HOXC9-202ENST00000504557 ZNF706Q9Y5V0 76 aaPredicted RBP8.31□□□□□ -1.08
HOXC9-202ENST00000504557 C20orf202A1L168 122 aa8.3□□□□□ -1.08
HOXC9-202ENST00000504557 KRTAP4-16G5E9R7 235 aaPredicted RBP8.3□□□□□ -1.08
HOXC9-202ENST00000504557 NDUFC2O95298 119 aa8.3□□□□□ -1.08
HOXC9-202ENST00000504557 TRAV23DV6A0A075B6W5 121 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms