RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 MSMPQ1L6U9 139 aa4.14□□□□□ -1.75
LINC02397-201ENST00000504409 MRPL34Q9BQ48 92 aaKnown RBP4.14□□□□□ -1.75
LINC02397-201ENST00000504409 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
LINC02397-201ENST00000504409 TMEM105Q8N8V8 129 aa4.14□□□□□ -1.75
LINC02397-201ENST00000504409 UNQ6190/PRO20217Q6UXQ8 127 aa4.14□□□□□ -1.75
LINC02397-201ENST00000504409 H3BS24 57 aa4.13□□□□□ -1.75
LINC02397-201ENST00000504409 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
LINC02397-201ENST00000504409 PRR4Q16378 134 aa4.12□□□□□ -1.75
LINC02397-201ENST00000504409 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
LINC02397-201ENST00000504409 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
LINC02397-201ENST00000504409 C15orf56Q8N910 161 aa4.12□□□□□ -1.75
LINC02397-201ENST00000504409 LINC00476Q8WZB0 136 aa4.12□□□□□ -1.75
LINC02397-201ENST00000504409 CSPG4Q6UVK1 2322 aa4.12□□□□□ -1.75
LINC02397-201ENST00000504409 Q8NAQ8 132 aa4.12□□□□□ -1.75
LINC02397-201ENST00000504409 IGHV6-1A0A0B4J1U7 121 aa4.11□□□□□ -1.75
LINC02397-201ENST00000504409 LRCOL1A6NCL2 159 aa4.11□□□□□ -1.75
LINC02397-201ENST00000504409 X6R8D5 127 aa4.11□□□□□ -1.75
LINC02397-201ENST00000504409 BBC3Q96PG8 261 aaPredicted RBP4.11□□□□□ -1.75
LINC02397-201ENST00000504409 Q8NA96 180 aa4.11□□□□□ -1.75
LINC02397-201ENST00000504409 C16orf90A8MZG2 172 aa4.1□□□□□ -1.75
LINC02397-201ENST00000504409 LCE6AA0A183 80 aa4.1□□□□□ -1.75
LINC02397-201ENST00000504409 PLA2G1BP04054 148 aaKnown RBP4.1□□□□□ -1.75
LINC02397-201ENST00000504409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.1□□□□□ -1.75
LINC02397-201ENST00000504409 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
LINC02397-201ENST00000504409 ODF3L2Q3SX64 289 aa4.1□□□□□ -1.75
LINC02397-201ENST00000504409 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
LINC02397-201ENST00000504409 DEFB135Q30KP9 77 aa4.1□□□□□ -1.75
LINC02397-201ENST00000504409 K7EQZ3 153 aa4.1□□□□□ -1.75
LINC02397-201ENST00000504409 A0A1B0GVX0 72 aa4.09□□□□□ -1.75
LINC02397-201ENST00000504409 Q5VV11 94 aa4.09□□□□□ -1.75
LINC02397-201ENST00000504409 PRB2P02812 416 aaPredicted RBP4.09□□□□□ -1.75
LINC02397-201ENST00000504409 LINC01006Q8NI28 216 aa4.09□□□□□ -1.76
LINC02397-201ENST00000504409 NUPR2A6NF83 97 aa4.08□□□□□ -1.76
LINC02397-201ENST00000504409 PRO3102Q9H379 93 aa4.08□□□□□ -1.76
LINC02397-201ENST00000504409 IGLV8-61A0A075B6I0 122 aa4.08□□□□□ -1.76
LINC02397-201ENST00000504409 A0A096LPF7 62 aa4.08□□□□□ -1.76
LINC02397-201ENST00000504409 SPG11Q96JI7 2443 aa4.08□□□□□ -1.76
LINC02397-201ENST00000504409 COX6B2Q6YFQ2 88 aa4.08□□□□□ -1.76
LINC02397-201ENST00000504409 SEC61BP60468 96 aaKnown RBP4.08□□□□□ -1.76
LINC02397-201ENST00000504409 MYO9AB2RTY4 2548 aa4.08□□□□□ -1.76
LINC02397-201ENST00000504409 DEFB136Q30KP8 78 aa4.07□□□□□ -1.76
LINC02397-201ENST00000504409 PROK1P58294 105 aa4.07□□□□□ -1.76
LINC02397-201ENST00000504409 LINC00313P59037 77 aa4.07□□□□□ -1.76
LINC02397-201ENST00000504409 PCOTHQ58A44 107 aa4.07□□□□□ -1.76
LINC02397-201ENST00000504409 LINC00612Q8N6U2 182 aa4.07□□□□□ -1.76
LINC02397-201ENST00000504409 GVINP1Q7Z2Y8 2422 aa4.06□□□□□ -1.76
LINC02397-201ENST00000504409 PRB1P04280 392 aa4.06□□□□□ -1.76
LINC02397-201ENST00000504409 SSBP3-AS1Q7Z2R9 100 aa4.06□□□□□ -1.76
LINC02397-201ENST00000504409 C8orf17Q9NRJ1 99 aa4.05□□□□□ -1.76
LINC02397-201ENST00000504409 IGLV1-50A0A075B6I6 118 aa4.05□□□□□ -1.76
LINC02397-201ENST00000504409 FSHBP01225 129 aa4.05□□□□□ -1.76
LINC02397-201ENST00000504409 C2CD3Q4AC94 2353 aa4.04□□□□□ -1.76
LINC02397-201ENST00000504409 DNAH10OSP0CZ25 163 aa4.04□□□□□ -1.76
LINC02397-201ENST00000504409 INAFM1C9JVW0 142 aa4.04□□□□□ -1.76
LINC02397-201ENST00000504409 LY6G6CO95867 125 aa4.03□□□□□ -1.76
LINC02397-201ENST00000504409 A6NN06 94 aa4.02□□□□□ -1.77
LINC02397-201ENST00000504409 Q6ZSN1 163 aa4.02□□□□□ -1.77
LINC02397-201ENST00000504409 ZCCHC13Q8WW36 166 aaKnown RBP4.01□□□□□ -1.77
LINC02397-201ENST00000504409 PRR3P79522 188 aaKnown RBP4.01□□□□□ -1.77
LINC02397-201ENST00000504409 CR1P17927 2039 aa4.01□□□□□ -1.77
LINC02397-201ENST00000504409 IGFL1Q6UW32 110 aa4.01□□□□□ -1.77
LINC02397-201ENST00000504409 DEFB1P60022 68 aa4.01□□□□□ -1.77
LINC02397-201ENST00000504409 IGKV2-24A0A0C4DH68 120 aa4□□□□□ -1.77
LINC02397-201ENST00000504409 Q6ZR54 194 aa4□□□□□ -1.77
LINC02397-201ENST00000504409 ABCA2Q9BZC7 2435 aa4□□□□□ -1.77
LINC02397-201ENST00000504409 ANAPC11Q9NYG5 84 aa4□□□□□ -1.77
LINC02397-201ENST00000504409 IGLV7-43P04211 117 aa4□□□□□ -1.77
LINC02397-201ENST00000504409 Q8N377 158 aa4□□□□□ -1.77
LINC02397-201ENST00000504409 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
LINC02397-201ENST00000504409 IGLV9-49A0A0B4J1Y8 123 aa3.99□□□□□ -1.77
LINC02397-201ENST00000504409 CNBPP62633 177 aaKnown RBP3.99□□□□□ -1.77
LINC02397-201ENST00000504409 HIVEP2P31629 2446 aa3.99□□□□□ -1.77
LINC02397-201ENST00000504409 SPRR1BP22528 89 aa3.99□□□□□ -1.77
LINC02397-201ENST00000504409 KRTAP16-1A8MUX0 517 aa3.98□□□□□ -1.77
LINC02397-201ENST00000504409 RIF1Q5UIP0 2472 aaKnown RBP3.98□□□□□ -1.77
LINC02397-201ENST00000504409 LINC00483Q53H64 154 aa3.97□□□□□ -1.77
LINC02397-201ENST00000504409 M0R2N4 97 aa3.97□□□□□ -1.77
LINC02397-201ENST00000504409 DSCR10P59022 87 aa3.97□□□□□ -1.77
LINC02397-201ENST00000504409 C1orf134Q5TEV5 83 aa3.97□□□□□ -1.77
LINC02397-201ENST00000504409 TLN1Q9Y490 2541 aaKnown RBP3.97□□□□□ -1.77
LINC02397-201ENST00000504409 ST20-AS1Q8NBB2 130 aa3.97□□□□□ -1.77
LINC02397-201ENST00000504409 J3QKU1 62 aa3.96□□□□□ -1.78
LINC02397-201ENST00000504409 ACACBO00763 2458 aa3.96□□□□□ -1.78
LINC02397-201ENST00000504409 OXTP01178 125 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 SPRR1AP35321 89 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 PRLHP81277 87 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 C9orf163Q8N9P6 203 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 TLN2Q9Y4G6 2542 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 PLA2G5P39877 138 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 GPR179Q6PRD1 2367 aa3.95□□□□□ -1.78
LINC02397-201ENST00000504409 CSNK1G2-AS1Q8NCQ2 148 aa3.94□□□□□ -1.78
LINC02397-201ENST00000504409 ROMO1P60602 79 aa3.94□□□□□ -1.78
LINC02397-201ENST00000504409 IGKV2D-30A0A075B6S6 120 aa3.93□□□□□ -1.78
LINC02397-201ENST00000504409 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
LINC02397-201ENST00000504409 FAM229BQ4G0N7 80 aa3.93□□□□□ -1.78
LINC02397-201ENST00000504409 OTOGLQ3ZCN5 2332 aa3.93□□□□□ -1.78
LINC02397-201ENST00000504409 CIRBP-AS1Q8TBR5 109 aa3.93□□□□□ -1.78
LINC02397-201ENST00000504409 A0A1W2PNM2 257 aa3.93□□□□□ -1.78
LINC02397-201ENST00000504409 A0A1B0GU33 70 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms