RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RAB5BP61020 215 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 RIGQ13278 110 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 MOBPQ13875 183 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 COX19Q49B96 90 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 MRPL51Q4U2R6 128 aaKnown RBP1.98□□□□□ -2.09
USP46-205ENST00000504078 TEX261Q6UWH6 196 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 Q6ZVQ6 151 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 SMIM2Q9BVW6 85 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 TMEM126AQ9H061 195 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 SPANXA1Q9NS26 97 aa1.98□□□□□ -2.09
USP46-205ENST00000504078 A0A1B0GUT8 65 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 KANTRA0A1W2PQU2 76 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 D6R8Y8 96 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 M0R378 163 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 PDE6DO43924 150 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 IFI27P40305 119 aaPredicted RBP1.97□□□□□ -2.09
USP46-205ENST00000504078 SMAGPQ0VAQ4 97 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 TAL2Q16559 108 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 CBLN2Q8IUK8 224 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 Q8NDZ9 215 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 SMIM12Q96EX1 92 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 URB1-AS1Q96HZ7 61 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 FAM218AQ96MZ4 157 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 SPRR4Q96PI1 79 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 TIMM17AQ99595 171 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 TIMM21Q9BVV7 248 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 TMEM191AQ9H0A3 160 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 BIN3Q9NQY0 253 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 TP73-AS1Q9UF72 201 aa1.97□□□□□ -2.09
USP46-205ENST00000504078 A8MWL6 223 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 UMAD1C9J7I0 102 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 F8VRH5 84 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 MRPS36P82909 103 aaKnown RBP1.96□□□□□ -2.1
USP46-205ENST00000504078 MRPL54Q6P161 138 aaKnown RBP1.96□□□□□ -2.1
USP46-205ENST00000504078 Q6ZN92 141 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 TEX43Q6ZNM6 134 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 Q8IZM0 81 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 Q8N377 158 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 PLEKHB2Q96CS7 222 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 TMEM141Q96I45 108 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 C2orf88Q9BSF0 95 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 CDKN2A-AS1Q9UH64 79 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 NDUFA12Q9UI09 145 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 SSPOA2VEC9 5147 aa1.96□□□□□ -2.1
USP46-205ENST00000504078 USH2AO75445 5202 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
USP46-205ENST00000504078 IGLV5-37A0A075B6J1 123 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 LOC389332A0A1B0GUA5 103 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 A0A1B0GVG6 124 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 SMIM1B2RUZ4 78 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 SPINK8P0C7L1 97 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 CKS2P33552 79 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 PFN2P35080 140 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 S100A12P80511 92 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 RPL24P83731 157 aaKnown RBP1.95□□□□□ -2.1
USP46-205ENST00000504078 SPAG11AQ6PDA7 123 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 Q6Q795 121 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 EIF5A2Q9GZV4 153 aaKnown RBP1.95□□□□□ -2.1
USP46-205ENST00000504078 PAM16Q9Y3D7 125 aa1.95□□□□□ -2.1
USP46-205ENST00000504078 NCR3O14931 201 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 ZNF345Q14585 488 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 C9orf153Q5TBE3 101 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 FAM104BQ5XKR9 115 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 HRCT1Q6UXD1 115 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 COX7B2Q8TF08 81 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 ZNF625Q96I27 306 aaPredicted RBP1.94□□□□□ -2.1
USP46-205ENST00000504078 SMIM7Q9BQ49 75 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 V9GYV3 84 aa1.94□□□□□ -2.1
USP46-205ENST00000504078 PPP1R17O96001 155 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 SPINK1P00995 79 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 RAB5AP20339 215 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 CXCL5P42830 114 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 C4orf26Q17RF5 130 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 C2orf66Q6UXQ4 117 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 LINC01551Q86U37 167 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 SLC51BQ86UW2 128 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 FAM19A2Q8N3H0 131 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 C20orf78Q9BR46 151 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 SND1-IT1Q9HBX3 110 aa1.93□□□□□ -2.1
USP46-205ENST00000504078 TINCRA0A1B0GVN0 87 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 ERC2-IT1O76042 136 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 SNAPINO95295 136 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 ADIRFQ15847 76 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 FAM19A3Q7Z5A8 133 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 SMCR5Q8TEV8 140 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 PRELID3AQ96N28 172 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 AMELXQ99217 191 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 CYSLTR1Q9Y271 337 aa1.92□□□□□ -2.1
USP46-205ENST00000504078 ZNF706Q9Y5V0 76 aaPredicted RBP1.92□□□□□ -2.1
USP46-205ENST00000504078 TRBV24-1A0A075B6N3 115 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 ETDCA0A1B0GVM5 59 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 SLC25A20O43772 301 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 IGLV6-57P01721 117 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 HERVK_113P63121 156 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 LINC00299Q6ZSB3 139 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 ORMDL3Q8N138 153 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 MAP1LC3AQ9H492 121 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 OSTCQ9NRP0 149 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 NAT8BQ9UHF3 227 aa1.91□□□□□ -2.1
USP46-205ENST00000504078 ERG28Q9UKR5 140 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms