RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 FABP4P15090 132 aa10.87□□□□□ -0.67
NFKB1-204ENST00000504044 MAP1LC3CQ9BXW4 147 aa10.87□□□□□ -0.67
NFKB1-204ENST00000504044 RPL13AP40429 203 aaKnown RBP10.86□□□□□ -0.67
NFKB1-204ENST00000504044 DPM2O94777 84 aa10.85□□□□□ -0.67
NFKB1-204ENST00000504044 UBE2AP49459 152 aa10.85□□□□□ -0.67
NFKB1-204ENST00000504044 LINC00310P59036 64 aa10.85□□□□□ -0.67
NFKB1-204ENST00000504044 PLEKHB2Q96CS7 222 aa10.85□□□□□ -0.67
NFKB1-204ENST00000504044 NDUFA12Q9UI09 145 aa10.85□□□□□ -0.67
NFKB1-204ENST00000504044 IGKCP01834 107 aa10.83□□□□□ -0.68
NFKB1-204ENST00000504044 VPREB1P12018 145 aa10.83□□□□□ -0.68
NFKB1-204ENST00000504044 IGKV2-28A0A075B6P5 120 aa10.82□□□□□ -0.68
NFKB1-204ENST00000504044 LEPROTO15243 131 aa10.82□□□□□ -0.68
NFKB1-204ENST00000504044 IGKV2D-28P01615 120 aa10.82□□□□□ -0.68
NFKB1-204ENST00000504044 A0A0U1RRA0 63 aa10.81□□□□□ -0.68
NFKB1-204ENST00000504044 NMUP48645 174 aa10.81□□□□□ -0.68
NFKB1-204ENST00000504044 PRR26Q8N8Z3 221 aa10.81□□□□□ -0.68
NFKB1-204ENST00000504044 SMIM13P0DJ93 91 aa10.8□□□□□ -0.68
NFKB1-204ENST00000504044 LGALS3P17931 250 aaKnown RBP10.8□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BKO60814 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 SCO1O75880 301 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BJP06899 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BOP23527 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BBP33778 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BDP58876 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BCP62807 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST2H2BEQ16778 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BHQ93079 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BNQ99877 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 HIST1H2BMQ99879 126 aa10.79□□□□□ -0.68
NFKB1-204ENST00000504044 J3QQQ9 107 aa10.78□□□□□ -0.68
NFKB1-204ENST00000504044 M0R378 163 aa10.78□□□□□ -0.68
NFKB1-204ENST00000504044 S100A12P80511 92 aa10.78□□□□□ -0.68
NFKB1-204ENST00000504044 MIR7-3HGQ8N6C7 128 aa10.78□□□□□ -0.68
NFKB1-204ENST00000504044 KRTAP1-4P0C5Y4 121 aa10.77□□□□□ -0.69
NFKB1-204ENST00000504044 BOD1L2Q8IYS8 172 aa10.77□□□□□ -0.69
NFKB1-204ENST00000504044 IGKV2D-26A0A0A0MRZ7 120 aa10.76□□□□□ -0.69
NFKB1-204ENST00000504044 FAM19A1Q7Z5A9 133 aa10.76□□□□□ -0.69
NFKB1-204ENST00000504044 PMCHL2Q9BQD1 86 aa10.76□□□□□ -0.69
NFKB1-204ENST00000504044 MIEN1Q9BRT3 115 aa10.76□□□□□ -0.69
NFKB1-204ENST00000504044 TMEM126AQ9H061 195 aa10.76□□□□□ -0.69
NFKB1-204ENST00000504044 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
NFKB1-204ENST00000504044 CRYGAP11844 174 aa10.73□□□□□ -0.69
NFKB1-204ENST00000504044 PET117Q6UWS5 81 aa10.72□□□□□ -0.69
NFKB1-204ENST00000504044 TMEM238C9JI98 176 aa10.71□□□□□ -0.69
NFKB1-204ENST00000504044 E9PLD3 99 aa10.71□□□□□ -0.69
NFKB1-204ENST00000504044 TSPEAR-AS2P59090 65 aa10.71□□□□□ -0.69
NFKB1-204ENST00000504044 KRTAP13-1Q8IUC0 172 aa10.71□□□□□ -0.69
NFKB1-204ENST00000504044 PRYO14603 147 aa10.7□□□□□ -0.7
NFKB1-204ENST00000504044 PRLHP81277 87 aa10.7□□□□□ -0.7
NFKB1-204ENST00000504044 NCR3O14931 201 aa10.69□□□□□ -0.7
NFKB1-204ENST00000504044 Q8NDZ9 215 aa10.69□□□□□ -0.7
NFKB1-204ENST00000504044 HMCN2Q8NDA2 5059 aa10.69□□□□□ -0.7
NFKB1-204ENST00000504044 C20orf202A1L168 122 aa10.68□□□□□ -0.7
NFKB1-204ENST00000504044 FAM229BQ4G0N7 80 aa10.68□□□□□ -0.7
NFKB1-204ENST00000504044 TYMSOSQ8TAI1 123 aa10.68□□□□□ -0.7
NFKB1-204ENST00000504044 TNXBP22105 4242 aa10.68□□□□□ -0.7
NFKB1-204ENST00000504044 LOC107984156A0A0G2JMH3 177 aa10.67□□□□□ -0.7
NFKB1-204ENST00000504044 AKR1D1P51857 326 aa10.67□□□□□ -0.7
NFKB1-204ENST00000504044 COA6Q5JTJ3 125 aaKnown RBP10.67□□□□□ -0.7
NFKB1-204ENST00000504044 LINC01545Q5VT33 79 aa10.67□□□□□ -0.7
NFKB1-204ENST00000504044 ARL17AQ8IVW1 177 aa10.67□□□□□ -0.7
NFKB1-204ENST00000504044 TRBV10-2A0A0K0K1G8 114 aa10.66□□□□□ -0.7
NFKB1-204ENST00000504044 HIGD2AQ9BW72 106 aa10.66□□□□□ -0.7
NFKB1-204ENST00000504044 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
NFKB1-204ENST00000504044 ETDCA0A1B0GVM5 59 aa10.65□□□□□ -0.7
NFKB1-204ENST00000504044 DAND5Q8N907 189 aa10.65□□□□□ -0.7
NFKB1-204ENST00000504044 KCNQ1DNQ9H478 68 aa10.65□□□□□ -0.7
NFKB1-204ENST00000504044 SPANXB1Q9NS25 103 aaPredicted RBP10.65□□□□□ -0.7
NFKB1-204ENST00000504044 NDUFC2O95298 119 aa10.64□□□□□ -0.71
NFKB1-204ENST00000504044 S100A1P23297 94 aa10.64□□□□□ -0.71
NFKB1-204ENST00000504044 LINC00337Q8N6G1 96 aa10.64□□□□□ -0.71
NFKB1-204ENST00000504044 CBY1Q9Y3M2 126 aa10.64□□□□□ -0.71
NFKB1-204ENST00000504044 KRTDAPP60985 99 aa10.63□□□□□ -0.71
NFKB1-204ENST00000504044 S100A7L2Q5SY68 101 aa10.63□□□□□ -0.71
NFKB1-204ENST00000504044 A0A087X002 238 aa10.62□□□□□ -0.71
NFKB1-204ENST00000504044 A0A0J9YXY3 114 aa10.62□□□□□ -0.71
NFKB1-204ENST00000504044 TRBV10-3A0A0K0K1G6 114 aa10.62□□□□□ -0.71
NFKB1-204ENST00000504044 C3orf79P0CE67 100 aa10.62□□□□□ -0.71
NFKB1-204ENST00000504044 DDTP30046 118 aa10.62□□□□□ -0.71
NFKB1-204ENST00000504044 SPRR1AP35321 89 aa10.6□□□□□ -0.71
NFKB1-204ENST00000504044 ZNF815PA8K554 130 aa10.59□□□□□ -0.71
NFKB1-204ENST00000504044 TIMM17BO60830 172 aa10.59□□□□□ -0.71
NFKB1-204ENST00000504044 ANAPC11Q9NYG5 84 aa10.58□□□□□ -0.72
NFKB1-204ENST00000504044 COPS9Q8WXC6 57 aa10.57□□□□□ -0.72
NFKB1-204ENST00000504044 HINT1P49773 126 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-204ENST00000504044 NPC2P61916 151 aa10.56□□□□□ -0.72
NFKB1-204ENST00000504044 JOSD1Q15040 202 aaPredicted RBP10.56□□□□□ -0.72
NFKB1-204ENST00000504044 S100A2P29034 98 aa10.55□□□□□ -0.72
NFKB1-204ENST00000504044 SPANXCQ9NY87 97 aa10.55□□□□□ -0.72
NFKB1-204ENST00000504044 TRAV23DV6A0A075B6W5 121 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 TSPAN13O95857 204 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 CTAG1AP78358 180 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 PRR4Q16378 134 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 LINC00304Q8N9R0 145 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
NFKB1-204ENST00000504044 IGLV6-57P01721 117 aa10.53□□□□□ -0.72
NFKB1-204ENST00000504044 SNRPEP62304 92 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms