RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ATP6V1G1O75348 118 aa7.08□□□□□ -1.28
MED28-203ENST00000503945 SCO1O75880 301 aa7.08□□□□□ -1.28
MED28-203ENST00000503945 TSPAN13O95857 204 aa7.08□□□□□ -1.28
MED28-203ENST00000503945 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
MED28-203ENST00000503945 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
MED28-203ENST00000503945 VPREB1P12018 145 aa7.07□□□□□ -1.28
MED28-203ENST00000503945 FAM19A1Q7Z5A9 133 aa7.07□□□□□ -1.28
MED28-203ENST00000503945 A0A087X002 238 aa7.06□□□□□ -1.28
MED28-203ENST00000503945 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
MED28-203ENST00000503945 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
MED28-203ENST00000503945 TMEM223A0PJW6 202 aa7.05□□□□□ -1.28
MED28-203ENST00000503945 LINC00587B1AMM8 73 aa7.05□□□□□ -1.28
MED28-203ENST00000503945 HSBP1O75506 76 aa7.05□□□□□ -1.28
MED28-203ENST00000503945 KRTAP13-1Q8IUC0 172 aa7.05□□□□□ -1.28
MED28-203ENST00000503945 TMEM126AQ9H061 195 aa7.05□□□□□ -1.28
MED28-203ENST00000503945 IGKV2D-26A0A0A0MRZ7 120 aa7.04□□□□□ -1.28
MED28-203ENST00000503945 A0A0U1RRA0 63 aa7.04□□□□□ -1.28
MED28-203ENST00000503945 TMEM238C9JI98 176 aa7.04□□□□□ -1.28
MED28-203ENST00000503945 FAM229BQ4G0N7 80 aa7.04□□□□□ -1.28
MED28-203ENST00000503945 YPEL4Q96NS1 127 aa7.04□□□□□ -1.28
MED28-203ENST00000503945 PRLHP81277 87 aa7.03□□□□□ -1.28
MED28-203ENST00000503945 CBLN2Q8IUK8 224 aa7.03□□□□□ -1.28
MED28-203ENST00000503945 FAM19A2Q8N3H0 131 aa7.03□□□□□ -1.28
MED28-203ENST00000503945 M0R378 163 aa7.02□□□□□ -1.29
MED28-203ENST00000503945 HERV-K104P63124 156 aa7.02□□□□□ -1.29
MED28-203ENST00000503945 MEIG1Q5JSS6 88 aa7.02□□□□□ -1.29
MED28-203ENST00000503945 TRGC2P03986 189 aa7.01□□□□□ -1.29
MED28-203ENST00000503945 SMIM13P0DJ93 91 aa7.01□□□□□ -1.29
MED28-203ENST00000503945 PLEKHB2Q96CS7 222 aa7.01□□□□□ -1.29
MED28-203ENST00000503945 MYMXA0A1B0GTQ4 84 aa7□□□□□ -1.29
MED28-203ENST00000503945 H0Y8G0 127 aa7□□□□□ -1.29
MED28-203ENST00000503945 LEPROTL1O95214 131 aa7□□□□□ -1.29
MED28-203ENST00000503945 KRTAP13-2Q52LG2 175 aa7□□□□□ -1.29
MED28-203ENST00000503945 BOD1L2Q8IYS8 172 aa7□□□□□ -1.29
MED28-203ENST00000503945 Q8NDZ9 215 aa7□□□□□ -1.29
MED28-203ENST00000503945 MAP1LC3CQ9BXW4 147 aa7□□□□□ -1.29
MED28-203ENST00000503945 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
MED28-203ENST00000503945 KRTAP9-2Q9BYQ4 174 aa6.99□□□□□ -1.29
MED28-203ENST00000503945 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
MED28-203ENST00000503945 S100A12P80511 92 aa6.98□□□□□ -1.29
MED28-203ENST00000503945 MIR7-3HGQ8N6C7 128 aa6.98□□□□□ -1.29
MED28-203ENST00000503945 LINC00304Q8N9R0 145 aa6.98□□□□□ -1.29
MED28-203ENST00000503945 CTAG1AP78358 180 aa6.97□□□□□ -1.29
MED28-203ENST00000503945 HSPB8Q9UJY1 196 aa6.97□□□□□ -1.29
MED28-203ENST00000503945 SERF1AO75920 110 aa6.96□□□□□ -1.3
MED28-203ENST00000503945 FABP4P15090 132 aa6.96□□□□□ -1.3
MED28-203ENST00000503945 PLNP26678 52 aa6.96□□□□□ -1.3
MED28-203ENST00000503945 KCNQ1DNQ9H478 68 aa6.96□□□□□ -1.3
MED28-203ENST00000503945 PRYO14603 147 aa6.95□□□□□ -1.3
MED28-203ENST00000503945 LEPROTO15243 131 aa6.95□□□□□ -1.3
MED28-203ENST00000503945 ZNF706Q9Y5V0 76 aaPredicted RBP6.95□□□□□ -1.3
MED28-203ENST00000503945 NCR3O14931 201 aa6.94□□□□□ -1.3
MED28-203ENST00000503945 HERVK_113P61574 105 aa6.94□□□□□ -1.3
MED28-203ENST00000503945 SPAG11AQ6PDA7 123 aa6.94□□□□□ -1.3
MED28-203ENST00000503945 SLC7A5P1Q8MH63 180 aa6.94□□□□□ -1.3
MED28-203ENST00000503945 LINC00337Q8N6G1 96 aa6.94□□□□□ -1.3
MED28-203ENST00000503945 ETDCA0A1B0GVM5 59 aa6.93□□□□□ -1.3
MED28-203ENST00000503945 J3QQQ9 107 aa6.93□□□□□ -1.3
MED28-203ENST00000503945 DPM2O94777 84 aa6.93□□□□□ -1.3
MED28-203ENST00000503945 SMCR5Q8TEV8 140 aa6.93□□□□□ -1.3
MED28-203ENST00000503945 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
MED28-203ENST00000503945 LOC107984156A0A0G2JMH3 177 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 TRBV10-3A0A0K0K1G6 114 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 A0A0U1RQV1 116 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 COLCA2A8K830 154 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 IGKCP01834 107 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 LGALS3P17931 250 aaKnown RBP6.92□□□□□ -1.3
MED28-203ENST00000503945 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
MED28-203ENST00000503945 NMUP48645 174 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 ARL17AQ8IVW1 177 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 RETNLBQ9BQ08 111 aa6.92□□□□□ -1.3
MED28-203ENST00000503945 FAT4Q6V0I7 4981 aa6.91□□□□□ -1.3
MED28-203ENST00000503945 SPRR1AP35321 89 aa6.91□□□□□ -1.3
MED28-203ENST00000503945 LINC00310P59036 64 aa6.91□□□□□ -1.3
MED28-203ENST00000503945 C3orf22Q8N5N4 141 aa6.91□□□□□ -1.3
MED28-203ENST00000503945 DAND5Q8N907 189 aa6.91□□□□□ -1.3
MED28-203ENST00000503945 MIEN1Q9BRT3 115 aa6.91□□□□□ -1.3
MED28-203ENST00000503945 IGLV7-46A0A075B6I9 117 aa6.9□□□□□ -1.3
MED28-203ENST00000503945 TRBV10-2A0A0K0K1G8 114 aa6.9□□□□□ -1.3
MED28-203ENST00000503945 PMCHL2Q9BQD1 86 aa6.9□□□□□ -1.3
MED28-203ENST00000503945 KRTAP4-16G5E9R7 235 aaPredicted RBP6.89□□□□□ -1.31
MED28-203ENST00000503945 DDTP30046 118 aa6.89□□□□□ -1.31
MED28-203ENST00000503945 TSPEAR-AS2P59090 65 aa6.89□□□□□ -1.31
MED28-203ENST00000503945 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
MED28-203ENST00000503945 CDIP1Q9H305 208 aa6.89□□□□□ -1.31
MED28-203ENST00000503945 GAGE2AQ6NT46 116 aa6.88□□□□□ -1.31
MED28-203ENST00000503945 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
MED28-203ENST00000503945 B5MCH6 92 aa6.87□□□□□ -1.31
MED28-203ENST00000503945 NDUFC2O95298 119 aa6.87□□□□□ -1.31
MED28-203ENST00000503945 SPANXB1Q9NS25 103 aaPredicted RBP6.87□□□□□ -1.31
MED28-203ENST00000503945 MUC17Q685J3 4493 aa6.86□□□□□ -1.31
MED28-203ENST00000503945 Q8NBF4 154 aa6.86□□□□□ -1.31
MED28-203ENST00000503945 JOSD1Q15040 202 aaPredicted RBP6.85□□□□□ -1.31
MED28-203ENST00000503945 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
MED28-203ENST00000503945 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 E9PLD3 99 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 SYS1-DBNDD2H3BUS1 97 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 SPINK1P00995 79 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 HINT1P49773 126 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms