RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 LINC00846Q9NV44 126 aa9.96□□□□□ -0.81
NEAT1-201ENST00000499732 CRYGAP11844 174 aa9.96□□□□□ -0.82
NEAT1-201ENST00000499732 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.82
NEAT1-201ENST00000499732 GYPEP15421 78 aa9.95□□□□□ -0.82
NEAT1-201ENST00000499732 XCL1P47992 114 aa9.95□□□□□ -0.82
NEAT1-201ENST00000499732 COX17Q14061 63 aa9.95□□□□□ -0.82
NEAT1-201ENST00000499732 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
NEAT1-201ENST00000499732 NCR3O14931 201 aa9.94□□□□□ -0.82
NEAT1-201ENST00000499732 C11orf68Q9H3H3 251 aaKnown RBP9.94□□□□□ -0.82
NEAT1-201ENST00000499732 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
NEAT1-201ENST00000499732 CCKP06307 115 aa9.93□□□□□ -0.82
NEAT1-201ENST00000499732 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
NEAT1-201ENST00000499732 RETNQ9HD89 108 aa9.92□□□□□ -0.82
NEAT1-201ENST00000499732 PRO0255Q9UI72 69 aa9.92□□□□□ -0.82
NEAT1-201ENST00000499732 TMEM256-PLSCR3K7ERE1 68 aa9.91□□□□□ -0.82
NEAT1-201ENST00000499732 SLPIP03973 132 aa9.91□□□□□ -0.82
NEAT1-201ENST00000499732 NANOS2P60321 138 aaKnown RBP9.91□□□□□ -0.82
NEAT1-201ENST00000499732 DAD1P61803 113 aa9.91□□□□□ -0.82
NEAT1-201ENST00000499732 Q8N814 137 aa9.91□□□□□ -0.82
NEAT1-201ENST00000499732 IGKV3D-7A0A0C4DH55 119 aa9.91□□□□□ -0.82
NEAT1-201ENST00000499732 ATP5EP2Q5VTU8 51 aa9.91□□□□□ -0.82
NEAT1-201ENST00000499732 SPART-AS1P0CW21 52 aa9.9□□□□□ -0.82
NEAT1-201ENST00000499732 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
NEAT1-201ENST00000499732 KIAA0087Q14695 138 aa9.89□□□□□ -0.83
NEAT1-201ENST00000499732 CFAP161Q6P656 301 aa9.89□□□□□ -0.83
NEAT1-201ENST00000499732 B9D2Q9BPU9 175 aa9.89□□□□□ -0.83
NEAT1-201ENST00000499732 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
NEAT1-201ENST00000499732 MUC7Q8TAX7 377 aa9.88□□□□□ -0.83
NEAT1-201ENST00000499732 TM2D3Q9BRN9 247 aa9.88□□□□□ -0.83
NEAT1-201ENST00000499732 CLPSL2Q6UWE3 100 aa9.87□□□□□ -0.83
NEAT1-201ENST00000499732 TENM3Q9P273 2699 aa9.87□□□□□ -0.83
NEAT1-201ENST00000499732 WWC2-AS2Q96NR7 200 aa9.86□□□□□ -0.83
NEAT1-201ENST00000499732 USP17L23D6RBM5 183 aa9.85□□□□□ -0.83
NEAT1-201ENST00000499732 CHCHD10Q8WYQ3 142 aaPredicted RBP9.85□□□□□ -0.83
NEAT1-201ENST00000499732 DNAH9Q9NYC9 4486 aa9.85□□□□□ -0.83
NEAT1-201ENST00000499732 J3KT08 172 aa9.84□□□□□ -0.83
NEAT1-201ENST00000499732 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
NEAT1-201ENST00000499732 LINC00269Q8N2A0 174 aa9.84□□□□□ -0.83
NEAT1-201ENST00000499732 A0A087WVE0 104 aa9.84□□□□□ -0.83
NEAT1-201ENST00000499732 A0A096LPF7 62 aa9.83□□□□□ -0.84
NEAT1-201ENST00000499732 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
NEAT1-201ENST00000499732 hADV29S1A0JD25 119 aa9.83□□□□□ -0.84
NEAT1-201ENST00000499732 PRR3P79522 188 aaKnown RBP9.83□□□□□ -0.84
NEAT1-201ENST00000499732 REG3AQ06141 175 aa9.83□□□□□ -0.84
NEAT1-201ENST00000499732 UPK3BQ9BT76 320 aa9.83□□□□□ -0.84
NEAT1-201ENST00000499732 HTN3P15516 51 aa9.82□□□□□ -0.84
NEAT1-201ENST00000499732 TMEM258P61165 79 aa9.82□□□□□ -0.84
NEAT1-201ENST00000499732 KMT2CQ8NEZ4 4911 aaKnown RBP9.82□□□□□ -0.84
NEAT1-201ENST00000499732 RPS28P62857 69 aaKnown RBP9.82□□□□□ -0.84
NEAT1-201ENST00000499732 C6orf99Q4VX62 202 aa9.82□□□□□ -0.84
NEAT1-201ENST00000499732 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
NEAT1-201ENST00000499732 LINC00575Q6W349 94 aa9.81□□□□□ -0.84
NEAT1-201ENST00000499732 COL7A1Q02388 2944 aa9.8□□□□□ -0.84
NEAT1-201ENST00000499732 A0A0J9YWU9 116 aa9.8□□□□□ -0.84
NEAT1-201ENST00000499732 UBL5Q9BZL1 73 aa9.8□□□□□ -0.84
NEAT1-201ENST00000499732 H3BQ85 93 aa9.79□□□□□ -0.84
NEAT1-201ENST00000499732 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
NEAT1-201ENST00000499732 LOC110117498A0A087WWA1 95 aa9.78□□□□□ -0.84
NEAT1-201ENST00000499732 IGLV10-54A0A075B6I4 117 aa9.77□□□□□ -0.84
NEAT1-201ENST00000499732 C9orf116Q5BN46 136 aaPredicted RBP9.77□□□□□ -0.84
NEAT1-201ENST00000499732 Q8NDZ9 215 aa9.77□□□□□ -0.84
NEAT1-201ENST00000499732 C11orf45Q8TAV5 145 aa9.77□□□□□ -0.84
NEAT1-201ENST00000499732 SPAG11BQ08648 103 aa9.77□□□□□ -0.85
NEAT1-201ENST00000499732 Q6ZQT0 140 aa9.77□□□□□ -0.85
NEAT1-201ENST00000499732 Q6ZTC4 211 aa9.77□□□□□ -0.85
NEAT1-201ENST00000499732 C6orf223Q8N319 242 aa9.77□□□□□ -0.85
NEAT1-201ENST00000499732 CYSTM1Q9H1C7 97 aa9.77□□□□□ -0.85
NEAT1-201ENST00000499732 HUWE1Q7Z6Z7 4374 aaKnown RBP9.76□□□□□ -0.85
NEAT1-201ENST00000499732 RBM3P98179 157 aaKnown RBP9.76□□□□□ -0.85
NEAT1-201ENST00000499732 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
NEAT1-201ENST00000499732 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
NEAT1-201ENST00000499732 GHRHP01286 108 aa9.75□□□□□ -0.85
NEAT1-201ENST00000499732 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
NEAT1-201ENST00000499732 LOC107984640A0A0U1RRK4 108 aa9.74□□□□□ -0.85
NEAT1-201ENST00000499732 BCE1O60756 84 aa9.74□□□□□ -0.85
NEAT1-201ENST00000499732 LELP1Q5T871 98 aa9.74□□□□□ -0.85
NEAT1-201ENST00000499732 Q8N3U1 123 aa9.74□□□□□ -0.85
NEAT1-201ENST00000499732 H3BNG1 76 aa9.73□□□□□ -0.85
NEAT1-201ENST00000499732 PDE6GP18545 87 aa9.73□□□□□ -0.85
NEAT1-201ENST00000499732 ENHOQ6UWT2 76 aa9.73□□□□□ -0.85
NEAT1-201ENST00000499732 NDUFC2-KCTD14E9PQ53 114 aa9.72□□□□□ -0.85
NEAT1-201ENST00000499732 UNQ6190/PRO20217Q6UXQ8 127 aa9.72□□□□□ -0.85
NEAT1-201ENST00000499732 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
NEAT1-201ENST00000499732 STAB2Q8WWQ8 2551 aa9.72□□□□□ -0.85
NEAT1-201ENST00000499732 C10orf25Q5T742 122 aa9.72□□□□□ -0.85
NEAT1-201ENST00000499732 FAM19A1Q7Z5A9 133 aa9.72□□□□□ -0.85
NEAT1-201ENST00000499732 TRAV23DV6A0A075B6W5 121 aa9.71□□□□□ -0.85
NEAT1-201ENST00000499732 LAMTOR3Q9UHA4 124 aa9.71□□□□□ -0.85
NEAT1-201ENST00000499732 RYR3Q15413 4870 aa9.71□□□□□ -0.86
NEAT1-201ENST00000499732 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
NEAT1-201ENST00000499732 DPH3Q96FX2 82 aa9.7□□□□□ -0.86
NEAT1-201ENST00000499732 DEFB131BA0A096LNP1 70 aa9.7□□□□□ -0.86
NEAT1-201ENST00000499732 DSCR8Q96T75 97 aa9.7□□□□□ -0.86
NEAT1-201ENST00000499732 TRAV10A0A0B4J240 114 aa9.68□□□□□ -0.86
NEAT1-201ENST00000499732 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
NEAT1-201ENST00000499732 Q6ZQY7 126 aa9.68□□□□□ -0.86
NEAT1-201ENST00000499732 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.67□□□□□ -0.86
NEAT1-201ENST00000499732 LINC01547P58512 204 aaPredicted RBP9.66□□□□□ -0.86
NEAT1-201ENST00000499732 CXCL6P80162 114 aa9.66□□□□□ -0.86
NEAT1-201ENST00000499732 Q6ZVQ6 151 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms