RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
CDK11A-222ENST00000498810 C11orf86A6NJI1 115 aa6.53□□□□□ -1.36
CDK11A-222ENST00000498810 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
CDK11A-222ENST00000498810 SFTA2Q6UW10 78 aa6.53□□□□□ -1.36
CDK11A-222ENST00000498810 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
CDK11A-222ENST00000498810 SLC7A5P1Q8MH63 180 aa6.53□□□□□ -1.36
CDK11A-222ENST00000498810 NUPR1O60356 82 aa6.52□□□□□ -1.37
CDK11A-222ENST00000498810 TRGC2P03986 189 aa6.52□□□□□ -1.37
CDK11A-222ENST00000498810 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDK11A-222ENST00000498810 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
CDK11A-222ENST00000498810 YPEL4Q96NS1 127 aa6.52□□□□□ -1.37
CDK11A-222ENST00000498810 ERG28Q9UKR5 140 aa6.52□□□□□ -1.37
CDK11A-222ENST00000498810 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
CDK11A-222ENST00000498810 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
CDK11A-222ENST00000498810 H0Y9J4 135 aa6.51□□□□□ -1.37
CDK11A-222ENST00000498810 ATP6V1G1O75348 118 aa6.51□□□□□ -1.37
CDK11A-222ENST00000498810 KRTAP7-1Q8IUC3 87 aa6.51□□□□□ -1.37
CDK11A-222ENST00000498810 FAM19A2Q8N3H0 131 aa6.51□□□□□ -1.37
CDK11A-222ENST00000498810 TP73-AS1Q9UF72 201 aa6.51□□□□□ -1.37
CDK11A-222ENST00000498810 TRAV12-1A0A0B4J245 112 aa6.5□□□□□ -1.37
CDK11A-222ENST00000498810 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
CDK11A-222ENST00000498810 LEPROTL1O95214 131 aa6.5□□□□□ -1.37
CDK11A-222ENST00000498810 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
CDK11A-222ENST00000498810 SERF1AO75920 110 aa6.49□□□□□ -1.37
CDK11A-222ENST00000498810 LINC00158P58513 81 aa6.49□□□□□ -1.37
CDK11A-222ENST00000498810 COX17Q14061 63 aa6.49□□□□□ -1.37
CDK11A-222ENST00000498810 MEIG1Q5JSS6 88 aa6.49□□□□□ -1.37
CDK11A-222ENST00000498810 RPL28P46779 137 aaKnown RBP6.48□□□□□ -1.37
CDK11A-222ENST00000498810 UBE2AP49459 152 aa6.48□□□□□ -1.37
CDK11A-222ENST00000498810 RPL24P83731 157 aaKnown RBP6.48□□□□□ -1.37
CDK11A-222ENST00000498810 HSPB8Q9UJY1 196 aa6.48□□□□□ -1.37
CDK11A-222ENST00000498810 IGKV2-28A0A075B6P5 120 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 A0A0U1RRA0 63 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 TMEM223A0PJW6 202 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 IGKV2D-28P01615 120 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 FABP4P15090 132 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 HERVK_113P61574 105 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 LINC00167Q96N53 147 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
CDK11A-222ENST00000498810 TMA7Q9Y2S6 64 aaKnown RBP6.47□□□□□ -1.37
CDK11A-222ENST00000498810 ZNF861PO60384 105 aa6.46□□□□□ -1.38
CDK11A-222ENST00000498810 BCE1O60756 84 aa6.46□□□□□ -1.38
CDK11A-222ENST00000498810 PRR26Q8N8Z3 221 aa6.46□□□□□ -1.38
CDK11A-222ENST00000498810 IGLV1-50A0A075B6I6 118 aa6.45□□□□□ -1.38
CDK11A-222ENST00000498810 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
CDK11A-222ENST00000498810 PLNP26678 52 aa6.45□□□□□ -1.38
CDK11A-222ENST00000498810 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
CDK11A-222ENST00000498810 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 SCO1O75880 301 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 HERV-K104P63124 156 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 ODF1Q14990 250 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 MAP1LC3CQ9BXW4 147 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 NDUFA12Q9UI09 145 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 HMCN2Q8NDA2 5059 aa6.44□□□□□ -1.38
CDK11A-222ENST00000498810 TNXBP22105 4242 aa6.43□□□□□ -1.38
CDK11A-222ENST00000498810 LINC00587B1AMM8 73 aa6.43□□□□□ -1.38
CDK11A-222ENST00000498810 DPM2O94777 84 aa6.43□□□□□ -1.38
CDK11A-222ENST00000498810 FAM19A1Q7Z5A9 133 aa6.43□□□□□ -1.38
CDK11A-222ENST00000498810 COLCA2A8K830 154 aa6.42□□□□□ -1.38
CDK11A-222ENST00000498810 IGKCP01834 107 aa6.42□□□□□ -1.38
CDK11A-222ENST00000498810 SMIM13P0DJ93 91 aa6.42□□□□□ -1.38
CDK11A-222ENST00000498810 VPREB1P12018 145 aa6.42□□□□□ -1.38
CDK11A-222ENST00000498810 LGALS3P17931 250 aaKnown RBP6.42□□□□□ -1.38
CDK11A-222ENST00000498810 PLEKHB2Q96CS7 222 aa6.42□□□□□ -1.38
CDK11A-222ENST00000498810 PMCHL2Q9BQD1 86 aa6.42□□□□□ -1.38
CDK11A-222ENST00000498810 S100A12P80511 92 aa6.41□□□□□ -1.38
CDK11A-222ENST00000498810 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
CDK11A-222ENST00000498810 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
CDK11A-222ENST00000498810 NCR3O14931 201 aa6.4□□□□□ -1.38
CDK11A-222ENST00000498810 LEPROTO15243 131 aa6.4□□□□□ -1.38
CDK11A-222ENST00000498810 PRLHP81277 87 aa6.4□□□□□ -1.38
CDK11A-222ENST00000498810 MIR7-3HGQ8N6C7 128 aa6.4□□□□□ -1.38
CDK11A-222ENST00000498810 TMEM126AQ9H061 195 aa6.4□□□□□ -1.38
CDK11A-222ENST00000498810 TMEM238C9JI98 176 aa6.39□□□□□ -1.39
CDK11A-222ENST00000498810 J3QQQ9 107 aa6.39□□□□□ -1.39
CDK11A-222ENST00000498810 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
CDK11A-222ENST00000498810 M0R378 163 aa6.38□□□□□ -1.39
CDK11A-222ENST00000498810 CRYGAP11844 174 aa6.38□□□□□ -1.39
CDK11A-222ENST00000498810 NMUP48645 174 aa6.38□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BKO60814 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BJP06899 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BOP23527 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BBP33778 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BDP58876 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BCP62807 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST2H2BEQ16778 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.37□□□□□ -1.39
CDK11A-222ENST00000498810 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BHQ93079 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BNQ99877 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIST1H2BMQ99879 126 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
CDK11A-222ENST00000498810 TSPEAR-AS2P59090 65 aa6.36□□□□□ -1.39
CDK11A-222ENST00000498810 DAND5Q8N907 189 aa6.36□□□□□ -1.39
CDK11A-222ENST00000498810 IGKV2D-26A0A0A0MRZ7 120 aa6.35□□□□□ -1.39
CDK11A-222ENST00000498810 ETDCA0A1B0GVM5 59 aa6.35□□□□□ -1.39
CDK11A-222ENST00000498810 PRYO14603 147 aa6.35□□□□□ -1.39
CDK11A-222ENST00000498810 Q8NDZ9 215 aa6.35□□□□□ -1.39
CDK11A-222ENST00000498810 SYS1-DBNDD2H3BUS1 97 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms