RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 A0A087X002 238 aa11.12□□□□□ -0.63
ECM1-207ENST00000498579 HERV-K104P63124 156 aa11.12□□□□□ -0.63
ECM1-207ENST00000498579 FAM229BQ4G0N7 80 aa11.12□□□□□ -0.63
ECM1-207ENST00000498579 FAM19A1Q7Z5A9 133 aa11.12□□□□□ -0.63
ECM1-207ENST00000498579 PRR4Q16378 134 aa11.11□□□□□ -0.63
ECM1-207ENST00000498579 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
ECM1-207ENST00000498579 RNF213Q63HN8 5207 aa11.09□□□□□ -0.63
ECM1-207ENST00000498579 M0R378 163 aa11.09□□□□□ -0.63
ECM1-207ENST00000498579 TRGC2P03986 189 aa11.09□□□□□ -0.63
ECM1-207ENST00000498579 PRLHP81277 87 aa11.09□□□□□ -0.63
ECM1-207ENST00000498579 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
ECM1-207ENST00000498579 TMEM238C9JI98 176 aa11.08□□□□□ -0.64
ECM1-207ENST00000498579 LEPROTL1O95214 131 aa11.08□□□□□ -0.64
ECM1-207ENST00000498579 A0A0U1RRA0 63 aa11.07□□□□□ -0.64
ECM1-207ENST00000498579 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
ECM1-207ENST00000498579 MAP1LC3CQ9BXW4 147 aa11.07□□□□□ -0.64
ECM1-207ENST00000498579 IGKV2D-26A0A0A0MRZ7 120 aa11.06□□□□□ -0.64
ECM1-207ENST00000498579 TSPAN13O95857 204 aa11.06□□□□□ -0.64
ECM1-207ENST00000498579 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
ECM1-207ENST00000498579 PLNP26678 52 aa11.06□□□□□ -0.64
ECM1-207ENST00000498579 Q8NDZ9 215 aa11.06□□□□□ -0.64
ECM1-207ENST00000498579 NDUFA12Q9UI09 145 aa11.06□□□□□ -0.64
ECM1-207ENST00000498579 HSPB8Q9UJY1 196 aa11.06□□□□□ -0.64
ECM1-207ENST00000498579 H0Y8G0 127 aa11.05□□□□□ -0.64
ECM1-207ENST00000498579 ANAPC11Q9NYG5 84 aa11.05□□□□□ -0.64
ECM1-207ENST00000498579 LPAP08519 4548 aa11.05□□□□□ -0.64
ECM1-207ENST00000498579 SERF1AO75920 110 aa11.04□□□□□ -0.64
ECM1-207ENST00000498579 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
ECM1-207ENST00000498579 CTAG1AP78358 180 aa11.03□□□□□ -0.64
ECM1-207ENST00000498579 MIR7-3HGQ8N6C7 128 aa11.03□□□□□ -0.64
ECM1-207ENST00000498579 PLEKHB2Q96CS7 222 aa11.03□□□□□ -0.64
ECM1-207ENST00000498579 HERVK_113P61574 105 aa11.02□□□□□ -0.65
ECM1-207ENST00000498579 KRTAP13-2Q52LG2 175 aa11.02□□□□□ -0.65
ECM1-207ENST00000498579 PRYO14603 147 aa11.01□□□□□ -0.65
ECM1-207ENST00000498579 LEPROTO15243 131 aa11.01□□□□□ -0.65
ECM1-207ENST00000498579 S100A12P80511 92 aa11.01□□□□□ -0.65
ECM1-207ENST00000498579 LINC00304Q8N9R0 145 aa11.01□□□□□ -0.65
ECM1-207ENST00000498579 HIGD2AQ9BW72 106 aa11.01□□□□□ -0.65
ECM1-207ENST00000498579 ZNF706Q9Y5V0 76 aaPredicted RBP11.01□□□□□ -0.65
ECM1-207ENST00000498579 DPM2O94777 84 aa10.99□□□□□ -0.65
ECM1-207ENST00000498579 NMUP48645 174 aa10.99□□□□□ -0.65
ECM1-207ENST00000498579 LINC00310P59036 64 aa10.99□□□□□ -0.65
ECM1-207ENST00000498579 LINC00337Q8N6G1 96 aa10.98□□□□□ -0.65
ECM1-207ENST00000498579 KCNQ1DNQ9H478 68 aa10.98□□□□□ -0.65
ECM1-207ENST00000498579 NCR3O14931 201 aa10.97□□□□□ -0.65
ECM1-207ENST00000498579 J3QQQ9 107 aa10.96□□□□□ -0.65
ECM1-207ENST00000498579 IGKCP01834 107 aa10.96□□□□□ -0.65
ECM1-207ENST00000498579 FABP4P15090 132 aa10.96□□□□□ -0.65
ECM1-207ENST00000498579 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
ECM1-207ENST00000498579 ETDCA0A1B0GVM5 59 aa10.95□□□□□ -0.66
ECM1-207ENST00000498579 COLCA2A8K830 154 aa10.95□□□□□ -0.66
ECM1-207ENST00000498579 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
ECM1-207ENST00000498579 SPRR1AP35321 89 aa10.95□□□□□ -0.66
ECM1-207ENST00000498579 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
ECM1-207ENST00000498579 SLC7A5P1Q8MH63 180 aa10.95□□□□□ -0.66
ECM1-207ENST00000498579 MIEN1Q9BRT3 115 aa10.95□□□□□ -0.66
ECM1-207ENST00000498579 TSPEAR-AS2P59090 65 aa10.94□□□□□ -0.66
ECM1-207ENST00000498579 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
ECM1-207ENST00000498579 TRBV10-2A0A0K0K1G8 114 aa10.93□□□□□ -0.66
ECM1-207ENST00000498579 SPAG11AQ6PDA7 123 aa10.93□□□□□ -0.66
ECM1-207ENST00000498579 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
ECM1-207ENST00000498579 PMCHL2Q9BQD1 86 aa10.91□□□□□ -0.66
ECM1-207ENST00000498579 SPANXB1Q9NS25 103 aaPredicted RBP10.91□□□□□ -0.66
ECM1-207ENST00000498579 DAND5Q8N907 189 aa10.9□□□□□ -0.66
ECM1-207ENST00000498579 KRTAP4-16G5E9R7 235 aaPredicted RBP10.89□□□□□ -0.67
ECM1-207ENST00000498579 DDTP30046 118 aa10.89□□□□□ -0.67
ECM1-207ENST00000498579 C3orf22Q8N5N4 141 aa10.89□□□□□ -0.67
ECM1-207ENST00000498579 NDUFC2O95298 119 aa10.88□□□□□ -0.67
ECM1-207ENST00000498579 SMCR5Q8TEV8 140 aa10.88□□□□□ -0.67
ECM1-207ENST00000498579 C4orf48Q5BLP8 95 aa10.87□□□□□ -0.67
ECM1-207ENST00000498579 E9PLD3 99 aa10.86□□□□□ -0.67
ECM1-207ENST00000498579 S100A7L2Q5SY68 101 aa10.86□□□□□ -0.67
ECM1-207ENST00000498579 RETNLBQ9BQ08 111 aa10.86□□□□□ -0.67
ECM1-207ENST00000498579 CBY1Q9Y3M2 126 aa10.85□□□□□ -0.67
ECM1-207ENST00000498579 B5MCH6 92 aa10.84□□□□□ -0.67
ECM1-207ENST00000498579 TPRXLQ17RH7 258 aa10.84□□□□□ -0.67
ECM1-207ENST00000498579 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
ECM1-207ENST00000498579 A0A0U1RQV1 116 aa10.83□□□□□ -0.68
ECM1-207ENST00000498579 SYS1-DBNDD2H3BUS1 97 aa10.83□□□□□ -0.68
ECM1-207ENST00000498579 LINC00483Q53H64 154 aa10.83□□□□□ -0.68
ECM1-207ENST00000498579 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BKO60814 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 IGLV6-57P01721 117 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BJP06899 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BOP23527 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BBP33778 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BDP58876 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BCP62807 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 JOSD1Q15040 202 aaPredicted RBP10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST2H2BEQ16778 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.82□□□□□ -0.68
ECM1-207ENST00000498579 Q6ZRX8 168 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BHQ93079 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BNQ99877 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 HIST1H2BMQ99879 126 aa10.82□□□□□ -0.68
ECM1-207ENST00000498579 PPDPFQ9H3Y8 114 aa10.81□□□□□ -0.68
ECM1-207ENST00000498579 TRAV23DV6A0A075B6W5 121 aa10.8□□□□□ -0.68
ECM1-207ENST00000498579 GAGE2AQ6NT46 116 aa10.8□□□□□ -0.68
ECM1-207ENST00000498579 Q8NBF4 154 aa10.8□□□□□ -0.68
ECM1-207ENST00000498579 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms