RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 LINC00167Q96N53 147 aa9.7□□□□□ -0.86
NR1H3-227ENST00000498548 IGLV5-39A0A0G2JS06 123 aa9.69□□□□□ -0.86
NR1H3-227ENST00000498548 C11orf86A6NJI1 115 aa9.69□□□□□ -0.86
NR1H3-227ENST00000498548 ATP5LO75964 103 aa9.69□□□□□ -0.86
NR1H3-227ENST00000498548 KRTAP1-4P0C5Y4 121 aa9.69□□□□□ -0.86
NR1H3-227ENST00000498548 ZNF861PO60384 105 aa9.68□□□□□ -0.86
NR1H3-227ENST00000498548 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
NR1H3-227ENST00000498548 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
NR1H3-227ENST00000498548 TP73-AS1Q9UF72 201 aa9.68□□□□□ -0.86
NR1H3-227ENST00000498548 HSBP1O75506 76 aa9.66□□□□□ -0.86
NR1H3-227ENST00000498548 CHTOPQ9Y3Y2 248 aaKnown RBP9.66□□□□□ -0.86
NR1H3-227ENST00000498548 FAM19A2Q8N3H0 131 aa9.65□□□□□ -0.86
NR1H3-227ENST00000498548 LRP2P98164 4655 aa9.64□□□□□ -0.87
NR1H3-227ENST00000498548 BCE1O60756 84 aa9.64□□□□□ -0.87
NR1H3-227ENST00000498548 S100A12P80511 92 aa9.64□□□□□ -0.87
NR1H3-227ENST00000498548 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
NR1H3-227ENST00000498548 ERG28Q9UKR5 140 aa9.64□□□□□ -0.87
NR1H3-227ENST00000498548 IGLV1-50A0A075B6I6 118 aa9.63□□□□□ -0.87
NR1H3-227ENST00000498548 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
NR1H3-227ENST00000498548 IFI27L1Q96BM0 104 aa9.63□□□□□ -0.87
NR1H3-227ENST00000498548 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
NR1H3-227ENST00000498548 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
NR1H3-227ENST00000498548 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
NR1H3-227ENST00000498548 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
NR1H3-227ENST00000498548 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
NR1H3-227ENST00000498548 TMEM223A0PJW6 202 aa9.6□□□□□ -0.87
NR1H3-227ENST00000498548 SCGB1D1O95968 90 aa9.6□□□□□ -0.87
NR1H3-227ENST00000498548 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
NR1H3-227ENST00000498548 Q8NDZ9 215 aa9.6□□□□□ -0.87
NR1H3-227ENST00000498548 TRAV12-1A0A0B4J245 112 aa9.59□□□□□ -0.87
NR1H3-227ENST00000498548 VPREB1P12018 145 aa9.59□□□□□ -0.87
NR1H3-227ENST00000498548 LPAP08519 4548 aa9.58□□□□□ -0.88
NR1H3-227ENST00000498548 H0Y8G0 127 aa9.58□□□□□ -0.88
NR1H3-227ENST00000498548 KRTDAPP60985 99 aa9.58□□□□□ -0.88
NR1H3-227ENST00000498548 COX17Q14061 63 aa9.58□□□□□ -0.88
NR1H3-227ENST00000498548 PCP4L1A6NKN8 68 aa9.57□□□□□ -0.88
NR1H3-227ENST00000498548 LEPROTL1O95214 131 aa9.57□□□□□ -0.88
NR1H3-227ENST00000498548 UBE2AP49459 152 aa9.57□□□□□ -0.88
NR1H3-227ENST00000498548 LINC00158P58513 81 aa9.57□□□□□ -0.88
NR1H3-227ENST00000498548 ANAPC11Q9NYG5 84 aa9.57□□□□□ -0.88
NR1H3-227ENST00000498548 RPL13AP40429 203 aaKnown RBP9.56□□□□□ -0.88
NR1H3-227ENST00000498548 HSPB8Q9UJY1 196 aa9.56□□□□□ -0.88
NR1H3-227ENST00000498548 A0A087X002 238 aa9.55□□□□□ -0.88
NR1H3-227ENST00000498548 TMEM238C9JI98 176 aa9.55□□□□□ -0.88
NR1H3-227ENST00000498548 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
NR1H3-227ENST00000498548 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
NR1H3-227ENST00000498548 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
NR1H3-227ENST00000498548 SMIM13P0DJ93 91 aa9.53□□□□□ -0.88
NR1H3-227ENST00000498548 PRLHP81277 87 aa9.53□□□□□ -0.88
NR1H3-227ENST00000498548 SFTA2Q6UW10 78 aa9.53□□□□□ -0.88
NR1H3-227ENST00000498548 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
NR1H3-227ENST00000498548 FAM19A1Q7Z5A9 133 aa9.53□□□□□ -0.88
NR1H3-227ENST00000498548 TSPAN13O95857 204 aa9.52□□□□□ -0.89
NR1H3-227ENST00000498548 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
NR1H3-227ENST00000498548 TMEM126AQ9H061 195 aa9.52□□□□□ -0.89
NR1H3-227ENST00000498548 TSTD3H0UI37 97 aa9.51□□□□□ -0.89
NR1H3-227ENST00000498548 M0R378 163 aa9.51□□□□□ -0.89
NR1H3-227ENST00000498548 MEIG1Q5JSS6 88 aa9.51□□□□□ -0.89
NR1H3-227ENST00000498548 CRYGAP11844 174 aa9.5□□□□□ -0.89
NR1H3-227ENST00000498548 LINC01545Q5VT33 79 aa9.5□□□□□ -0.89
NR1H3-227ENST00000498548 TYMSOSQ8TAI1 123 aa9.5□□□□□ -0.89
NR1H3-227ENST00000498548 PRO1933Q9H354 126 aa9.5□□□□□ -0.89
NR1H3-227ENST00000498548 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
NR1H3-227ENST00000498548 PMCHL2Q9BQD1 86 aa9.49□□□□□ -0.89
NR1H3-227ENST00000498548 VAMP8Q9BV40 100 aa9.49□□□□□ -0.89
NR1H3-227ENST00000498548 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
NR1H3-227ENST00000498548 PRR4Q16378 134 aa9.48□□□□□ -0.89
NR1H3-227ENST00000498548 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
NR1H3-227ENST00000498548 MIR7-3HGQ8N6C7 128 aa9.48□□□□□ -0.89
NR1H3-227ENST00000498548 NDUFA12Q9UI09 145 aa9.48□□□□□ -0.89
NR1H3-227ENST00000498548 C20orf202A1L168 122 aa9.47□□□□□ -0.89
NR1H3-227ENST00000498548 DDTP30046 118 aa9.47□□□□□ -0.89
NR1H3-227ENST00000498548 NCR3O14931 201 aa9.46□□□□□ -0.9
NR1H3-227ENST00000498548 HERV-K104P63124 156 aa9.46□□□□□ -0.9
NR1H3-227ENST00000498548 BOD1L2Q8IYS8 172 aa9.46□□□□□ -0.9
NR1H3-227ENST00000498548 MYMXA0A1B0GTQ4 84 aa9.45□□□□□ -0.9
NR1H3-227ENST00000498548 LEPROTO15243 131 aa9.45□□□□□ -0.9
NR1H3-227ENST00000498548 PAM16Q9Y3D7 125 aa9.45□□□□□ -0.9
NR1H3-227ENST00000498548 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
NR1H3-227ENST00000498548 DPM2O94777 84 aa9.43□□□□□ -0.9
NR1H3-227ENST00000498548 ATOH7Q8N100 152 aa9.43□□□□□ -0.9
NR1H3-227ENST00000498548 DAND5Q8N907 189 aa9.43□□□□□ -0.9
NR1H3-227ENST00000498548 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
NR1H3-227ENST00000498548 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
NR1H3-227ENST00000498548 HIGD2AQ9BW72 106 aa9.43□□□□□ -0.9
NR1H3-227ENST00000498548 PLNP26678 52 aa9.42□□□□□ -0.9
NR1H3-227ENST00000498548 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
NR1H3-227ENST00000498548 IGKCP01834 107 aa9.41□□□□□ -0.9
NR1H3-227ENST00000498548 FAM229BQ4G0N7 80 aa9.41□□□□□ -0.9
NR1H3-227ENST00000498548 IGKV2D-26A0A0A0MRZ7 120 aa9.4□□□□□ -0.9
NR1H3-227ENST00000498548 J3QQQ9 107 aa9.4□□□□□ -0.9
NR1H3-227ENST00000498548 HERVK_113P61574 105 aa9.39□□□□□ -0.91
NR1H3-227ENST00000498548 C3orf22Q8N5N4 141 aa9.39□□□□□ -0.91
NR1H3-227ENST00000498548 C14orf144Q96I85 54 aa9.39□□□□□ -0.91
NR1H3-227ENST00000498548 TRBV10-3A0A0K0K1G6 114 aa9.38□□□□□ -0.91
NR1H3-227ENST00000498548 PRYO14603 147 aa9.38□□□□□ -0.91
NR1H3-227ENST00000498548 LGALS3P17931 250 aaKnown RBP9.38□□□□□ -0.91
NR1H3-227ENST00000498548 UQCR10Q9UDW1 63 aa9.38□□□□□ -0.91
NR1H3-227ENST00000498548 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
NR1H3-227ENST00000498548 KCNQ1DNQ9H478 68 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms