RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 HIST1H2BCP62807 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST2H2BEQ16778 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BHQ93079 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BNQ99877 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 HIST1H2BMQ99879 126 aa7.22□□□□□ -1.25
THBS3-209ENST00000498500 ERG28Q9UKR5 140 aa7.21□□□□□ -1.26
THBS3-209ENST00000498500 PFN2P35080 140 aa7.2□□□□□ -1.26
THBS3-209ENST00000498500 MRPL55Q7Z7F7 128 aaKnown RBP7.2□□□□□ -1.26
THBS3-209ENST00000498500 LEPROTL1O95214 131 aa7.19□□□□□ -1.26
THBS3-209ENST00000498500 Q8NDZ9 215 aa7.19□□□□□ -1.26
THBS3-209ENST00000498500 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
THBS3-209ENST00000498500 H0Y8G0 127 aa7.18□□□□□ -1.26
THBS3-209ENST00000498500 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
THBS3-209ENST00000498500 VPREB1P12018 145 aa7.18□□□□□ -1.26
THBS3-209ENST00000498500 RPL13AP40429 203 aaKnown RBP7.18□□□□□ -1.26
THBS3-209ENST00000498500 LBHQ53QV2 105 aaPredicted RBP7.18□□□□□ -1.26
THBS3-209ENST00000498500 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
THBS3-209ENST00000498500 SFTA2Q6UW10 78 aa7.18□□□□□ -1.26
THBS3-209ENST00000498500 LINC00167Q96N53 147 aa7.18□□□□□ -1.26
THBS3-209ENST00000498500 TSPEAR-AS2P59090 65 aa7.17□□□□□ -1.26
THBS3-209ENST00000498500 COX17Q14061 63 aa7.17□□□□□ -1.26
THBS3-209ENST00000498500 GAGE10A6NGK3 116 aa7.16□□□□□ -1.26
THBS3-209ENST00000498500 TSPAN13O95857 204 aa7.16□□□□□ -1.26
THBS3-209ENST00000498500 FABP4P15090 132 aa7.16□□□□□ -1.26
THBS3-209ENST00000498500 HSPB8Q9UJY1 196 aa7.16□□□□□ -1.26
THBS3-209ENST00000498500 RPL37AP8A6NKH3 93 aa7.15□□□□□ -1.26
THBS3-209ENST00000498500 BCE1O60756 84 aa7.15□□□□□ -1.26
THBS3-209ENST00000498500 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.26
THBS3-209ENST00000498500 NKAPP1Q8N9T2 125 aa7.15□□□□□ -1.26
THBS3-209ENST00000498500 PMCHL2Q9BQD1 86 aa7.15□□□□□ -1.26
THBS3-209ENST00000498500 ZNF861PO60384 105 aa7.14□□□□□ -1.27
THBS3-209ENST00000498500 PLNP26678 52 aa7.14□□□□□ -1.27
THBS3-209ENST00000498500 TMA7Q9Y2S6 64 aaKnown RBP7.14□□□□□ -1.27
THBS3-209ENST00000498500 DPM2O94777 84 aa7.13□□□□□ -1.27
THBS3-209ENST00000498500 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
THBS3-209ENST00000498500 NDUFA12Q9UI09 145 aa7.13□□□□□ -1.27
THBS3-209ENST00000498500 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
THBS3-209ENST00000498500 LEPROTO15243 131 aa7.12□□□□□ -1.27
THBS3-209ENST00000498500 SMIM13P0DJ93 91 aa7.12□□□□□ -1.27
THBS3-209ENST00000498500 LINC00158P58513 81 aa7.12□□□□□ -1.27
THBS3-209ENST00000498500 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
THBS3-209ENST00000498500 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
THBS3-209ENST00000498500 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
THBS3-209ENST00000498500 IGKCP01834 107 aa7.11□□□□□ -1.27
THBS3-209ENST00000498500 HERV-K104P63124 156 aa7.11□□□□□ -1.27
THBS3-209ENST00000498500 S100A12P80511 92 aa7.11□□□□□ -1.27
THBS3-209ENST00000498500 RPL24P83731 157 aaKnown RBP7.1□□□□□ -1.27
THBS3-209ENST00000498500 MEIG1Q5JSS6 88 aa7.1□□□□□ -1.27
THBS3-209ENST00000498500 MIR7-3HGQ8N6C7 128 aa7.1□□□□□ -1.27
THBS3-209ENST00000498500 PLEKHB2Q96CS7 222 aa7.1□□□□□ -1.27
THBS3-209ENST00000498500 MAP1LC3CQ9BXW4 147 aa7.1□□□□□ -1.27
THBS3-209ENST00000498500 MYMXA0A1B0GTQ4 84 aa7.09□□□□□ -1.27
THBS3-209ENST00000498500 TMEM238C9JI98 176 aa7.09□□□□□ -1.27
THBS3-209ENST00000498500 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
THBS3-209ENST00000498500 J3QQQ9 107 aa7.09□□□□□ -1.27
THBS3-209ENST00000498500 RPL28P46779 137 aaKnown RBP7.09□□□□□ -1.27
THBS3-209ENST00000498500 M0R378 163 aa7.08□□□□□ -1.28
THBS3-209ENST00000498500 HERVK_113P61574 105 aa7.08□□□□□ -1.28
THBS3-209ENST00000498500 CTAG1AP78358 180 aa7.08□□□□□ -1.28
THBS3-209ENST00000498500 LINC01545Q5VT33 79 aa7.08□□□□□ -1.28
THBS3-209ENST00000498500 HIST3H2BBQ8N257 126 aa7.08□□□□□ -1.28
THBS3-209ENST00000498500 TMEM126AQ9H061 195 aa7.08□□□□□ -1.28
THBS3-209ENST00000498500 E9PLD3 99 aa7.06□□□□□ -1.28
THBS3-209ENST00000498500 NMUP48645 174 aa7.06□□□□□ -1.28
THBS3-209ENST00000498500 UBE2AP49459 152 aa7.06□□□□□ -1.28
THBS3-209ENST00000498500 SNRPEP62304 92 aaKnown RBP7.06□□□□□ -1.28
THBS3-209ENST00000498500 PRLHP81277 87 aa7.06□□□□□ -1.28
THBS3-209ENST00000498500 BOD1L2Q8IYS8 172 aa7.06□□□□□ -1.28
THBS3-209ENST00000498500 DAND5Q8N907 189 aa7.06□□□□□ -1.28
THBS3-209ENST00000498500 MUC17Q685J3 4493 aa7.05□□□□□ -1.28
THBS3-209ENST00000498500 A0A087X002 238 aa7.05□□□□□ -1.28
THBS3-209ENST00000498500 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
THBS3-209ENST00000498500 C5orf52A6NGY3 159 aa7.05□□□□□ -1.28
THBS3-209ENST00000498500 NCR3O14931 201 aa7.05□□□□□ -1.28
THBS3-209ENST00000498500 LGALS3P17931 250 aaKnown RBP7.05□□□□□ -1.28
THBS3-209ENST00000498500 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
THBS3-209ENST00000498500 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
THBS3-209ENST00000498500 LINC00587B1AMM8 73 aa7.04□□□□□ -1.28
THBS3-209ENST00000498500 C3orf79P0CE67 100 aa7.04□□□□□ -1.28
THBS3-209ENST00000498500 PET117Q6UWS5 81 aa7.04□□□□□ -1.28
THBS3-209ENST00000498500 FAM19A1Q7Z5A9 133 aa7.04□□□□□ -1.28
THBS3-209ENST00000498500 LINC00518Q8N0U6 118 aa7.04□□□□□ -1.28
THBS3-209ENST00000498500 TYMSOSQ8TAI1 123 aa7.04□□□□□ -1.28
THBS3-209ENST00000498500 HIST1H2BLQ99880 126 aa7.04□□□□□ -1.28
THBS3-209ENST00000498500 RETNLBQ9BQ08 111 aa7.03□□□□□ -1.28
THBS3-209ENST00000498500 IGKV2D-26A0A0A0MRZ7 120 aa7.02□□□□□ -1.29
THBS3-209ENST00000498500 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
THBS3-209ENST00000498500 PRYO14603 147 aa7.02□□□□□ -1.29
THBS3-209ENST00000498500 CRYGAP11844 174 aa7.02□□□□□ -1.29
THBS3-209ENST00000498500 SPRR1AP35321 89 aa7.02□□□□□ -1.29
THBS3-209ENST00000498500 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
THBS3-209ENST00000498500 ANAPC11Q9NYG5 84 aa7.02□□□□□ -1.29
THBS3-209ENST00000498500 TRBV10-3A0A0K0K1G6 114 aa7.01□□□□□ -1.29
THBS3-209ENST00000498500 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
THBS3-209ENST00000498500 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
THBS3-209ENST00000498500 KRTAP13-2Q52LG2 175 aa7.01□□□□□ -1.29
THBS3-209ENST00000498500 LITAFQ99732 161 aa7.01□□□□□ -1.29
THBS3-209ENST00000498500 KCNQ1DNQ9H478 68 aa7.01□□□□□ -1.29
THBS3-209ENST00000498500 KRTAP4-16G5E9R7 235 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms