RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 MALRD1Q5VYJ5 2156 aa4.14□□□□□ -1.75
SNX13-212ENST00000498463 TRGV2A0A075B6R0 118 aa4.13□□□□□ -1.75
SNX13-212ENST00000498463 COX7BP24311 80 aa4.13□□□□□ -1.75
SNX13-212ENST00000498463 ARHGAP32A7KAX9 2087 aa4.13□□□□□ -1.75
SNX13-212ENST00000498463 NDUFA4O00483 81 aa4.12□□□□□ -1.75
SNX13-212ENST00000498463 COX7B2Q8TF08 81 aa4.12□□□□□ -1.75
SNX13-212ENST00000498463 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
SNX13-212ENST00000498463 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
SNX13-212ENST00000498463 CNBPP62633 177 aaKnown RBP4.11□□□□□ -1.75
SNX13-212ENST00000498463 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.11□□□□□ -1.75
SNX13-212ENST00000498463 CDKN2A-AS1Q9UH64 79 aa4.11□□□□□ -1.75
SNX13-212ENST00000498463 C10orf142B7Z368 130 aa4.1□□□□□ -1.75
SNX13-212ENST00000498463 RNASE3P12724 160 aaKnown RBP4.1□□□□□ -1.75
SNX13-212ENST00000498463 LINC00158P58513 81 aa4.1□□□□□ -1.75
SNX13-212ENST00000498463 SPAG11BQ08648 103 aa4.1□□□□□ -1.75
SNX13-212ENST00000498463 C10orf55Q5SWW7 151 aa4.1□□□□□ -1.75
SNX13-212ENST00000498463 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.1□□□□□ -1.75
SNX13-212ENST00000498463 LEAP2Q969E1 77 aa4.1□□□□□ -1.75
SNX13-212ENST00000498463 GAFA1Q96PS6 74 aa4.1□□□□□ -1.75
SNX13-212ENST00000498463 COX17Q14061 63 aa4.09□□□□□ -1.75
SNX13-212ENST00000498463 LINC00575Q6W349 94 aa4.09□□□□□ -1.75
SNX13-212ENST00000498463 FDCSPQ8NFU4 85 aa4.09□□□□□ -1.75
SNX13-212ENST00000498463 KCNQ1DNQ9H478 68 aa4.09□□□□□ -1.75
SNX13-212ENST00000498463 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.08□□□□□ -1.76
SNX13-212ENST00000498463 KLK9Q2XQG4 91 aa4.08□□□□□ -1.76
SNX13-212ENST00000498463 PCNTO95613 3336 aa4.08□□□□□ -1.76
SNX13-212ENST00000498463 CCL18P55774 89 aa4.07□□□□□ -1.76
SNX13-212ENST00000498463 TPRXLQ17RH7 258 aa4.07□□□□□ -1.76
SNX13-212ENST00000498463 SPAG11AQ6PDA7 123 aa4.07□□□□□ -1.76
SNX13-212ENST00000498463 SPTY2D1-AS1A0A0U1RR47 76 aa4.06□□□□□ -1.76
SNX13-212ENST00000498463 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
SNX13-212ENST00000498463 H0Y9P7 68 aa4.06□□□□□ -1.76
SNX13-212ENST00000498463 IGLV1-51P01701 117 aa4.06□□□□□ -1.76
SNX13-212ENST00000498463 PRB4P10163 310 aaPredicted RBP4.06□□□□□ -1.76
SNX13-212ENST00000498463 C9orf163Q8N9P6 203 aa4.06□□□□□ -1.76
SNX13-212ENST00000498463 PLAC8Q9NZF1 115 aa4.06□□□□□ -1.76
SNX13-212ENST00000498463 ZGRF1Q86YA3 2104 aa4.06□□□□□ -1.76
SNX13-212ENST00000498463 CEP350Q5VT06 3117 aa4.05□□□□□ -1.76
SNX13-212ENST00000498463 TRGV4A0A0C4DH28 118 aa4.05□□□□□ -1.76
SNX13-212ENST00000498463 BRCA2P51587 3418 aa4.05□□□□□ -1.76
SNX13-212ENST00000498463 HTTP42858 3142 aa4.04□□□□□ -1.76
SNX13-212ENST00000498463 PATE1Q8WXA2 126 aa4.04□□□□□ -1.76
SNX13-212ENST00000498463 PI4KAP42356 2102 aa4.04□□□□□ -1.76
SNX13-212ENST00000498463 CENPFP49454 3210 aa4.03□□□□□ -1.76
SNX13-212ENST00000498463 KRTAP10-8P60410 259 aa4.03□□□□□ -1.76
SNX13-212ENST00000498463 C1orf134Q5TEV5 83 aa4.03□□□□□ -1.76
SNX13-212ENST00000498463 KRTAP17-1Q9BYP8 105 aa4.03□□□□□ -1.76
SNX13-212ENST00000498463 TNCP24821 2201 aa4.02□□□□□ -1.77
SNX13-212ENST00000498463 ROMO1P60602 79 aa4.02□□□□□ -1.77
SNX13-212ENST00000498463 MED13Q9UHV7 2174 aa4.02□□□□□ -1.77
SNX13-212ENST00000498463 DEFB112Q30KQ8 113 aa4.01□□□□□ -1.77
SNX13-212ENST00000498463 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
SNX13-212ENST00000498463 COA5Q86WW8 74 aa4.01□□□□□ -1.77
SNX13-212ENST00000498463 PDE4DIPQ5VU43 2346 aa4.01□□□□□ -1.77
SNX13-212ENST00000498463 CLPSL1A2RUU4 121 aa4□□□□□ -1.77
SNX13-212ENST00000498463 TTTY12Q9BZ98 90 aa4□□□□□ -1.77
SNX13-212ENST00000498463 KAAG1Q9UBP8 84 aa4□□□□□ -1.77
SNX13-212ENST00000498463 RTTNQ86VV8 2226 aa4□□□□□ -1.77
SNX13-212ENST00000498463 RP1P56715 2156 aa4□□□□□ -1.77
SNX13-212ENST00000498463 A0A087WSZ3 146 aa3.99□□□□□ -1.77
SNX13-212ENST00000498463 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
SNX13-212ENST00000498463 DOCK10Q96BY6 2186 aa3.98□□□□□ -1.77
SNX13-212ENST00000498463 COX6A2Q02221 97 aa3.98□□□□□ -1.77
SNX13-212ENST00000498463 SPATA8Q6RVD6 105 aa3.98□□□□□ -1.77
SNX13-212ENST00000498463 Q8IZM0 81 aa3.98□□□□□ -1.77
SNX13-212ENST00000498463 SPACA4Q8TDM5 124 aa3.98□□□□□ -1.77
SNX13-212ENST00000498463 UQCR11O14957 56 aa3.97□□□□□ -1.77
SNX13-212ENST00000498463 TFF1P04155 84 aa3.97□□□□□ -1.77
SNX13-212ENST00000498463 APELAP0DMC3 54 aa3.97□□□□□ -1.77
SNX13-212ENST00000498463 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
SNX13-212ENST00000498463 MINOS1Q5TGZ0 78 aa3.97□□□□□ -1.77
SNX13-212ENST00000498463 Q6ZQY7 126 aa3.97□□□□□ -1.77
SNX13-212ENST00000498463 DNAH12Q6ZR08 3092 aa3.97□□□□□ -1.77
SNX13-212ENST00000498463 MUC4Q99102 2169 aa3.95□□□□□ -1.78
SNX13-212ENST00000498463 DEFB131BA0A096LNP1 70 aa3.95□□□□□ -1.78
SNX13-212ENST00000498463 A0A096LNT2 108 aa3.95□□□□□ -1.78
SNX13-212ENST00000498463 B4DSR2 109 aa3.95□□□□□ -1.78
SNX13-212ENST00000498463 CCL3L1P16619 93 aa3.95□□□□□ -1.78
SNX13-212ENST00000498463 TOMM7Q9P0U1 55 aa3.95□□□□□ -1.78
SNX13-212ENST00000498463 DNAJC13O75165 2243 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 SPINK7P58062 85 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 C1orf137Q5JT78 98 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 DEFB108BQ8NET1 73 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 TP53AIP1Q9HCN2 124 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 F5P12259 2224 aa3.94□□□□□ -1.78
SNX13-212ENST00000498463 H3BUA1 57 aa3.93□□□□□ -1.78
SNX13-212ENST00000498463 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
SNX13-212ENST00000498463 IGLV5-48A0A075B6I7 105 aa3.92□□□□□ -1.78
SNX13-212ENST00000498463 USMG5Q96IX5 58 aa3.92□□□□□ -1.78
SNX13-212ENST00000498463 M0R2N4 97 aa3.91□□□□□ -1.78
SNX13-212ENST00000498463 NAV3Q8IVL0 2385 aa3.91□□□□□ -1.78
SNX13-212ENST00000498463 CADP27708 2225 aa3.9□□□□□ -1.78
SNX13-212ENST00000498463 SPRR4Q96PI1 79 aa3.9□□□□□ -1.79
SNX13-212ENST00000498463 MKI67P46013 3256 aaKnown RBP3.9□□□□□ -1.79
SNX13-212ENST00000498463 ZFHX2Q9C0A1 2572 aaPredicted RBP3.9□□□□□ -1.79
SNX13-212ENST00000498463 PRB3Q04118 309 aaPredicted RBP3.89□□□□□ -1.79
SNX13-212ENST00000498463 DEFB104AQ8WTQ1 72 aa3.89□□□□□ -1.79
SNX13-212ENST00000498463 CNTRLQ7Z7A1 2325 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms