RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 C3orf79P0CE67 100 aa9.45□□□□□ -0.9
MUC1-220ENST00000498431 KRTDAPP60985 99 aa9.45□□□□□ -0.9
MUC1-220ENST00000498431 PET117Q6UWS5 81 aa9.45□□□□□ -0.9
MUC1-220ENST00000498431 C11orf86A6NJI1 115 aa9.44□□□□□ -0.9
MUC1-220ENST00000498431 H3BRM9 83 aa9.44□□□□□ -0.9
MUC1-220ENST00000498431 ZNF22P17026 224 aaPredicted RBP9.44□□□□□ -0.9
MUC1-220ENST00000498431 C22orf24Q9Y442 160 aa9.44□□□□□ -0.9
MUC1-220ENST00000498431 TMEM170BQ5T4T1 132 aa9.43□□□□□ -0.9
MUC1-220ENST00000498431 DPM2O94777 84 aa9.42□□□□□ -0.9
MUC1-220ENST00000498431 PLNP26678 52 aa9.42□□□□□ -0.9
MUC1-220ENST00000498431 PMCHL2Q9BQD1 86 aa9.42□□□□□ -0.9
MUC1-220ENST00000498431 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
MUC1-220ENST00000498431 LINC01545Q5VT33 79 aa9.41□□□□□ -0.9
MUC1-220ENST00000498431 C20orf202A1L168 122 aa9.4□□□□□ -0.9
MUC1-220ENST00000498431 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
MUC1-220ENST00000498431 IGKCP01834 107 aa9.4□□□□□ -0.9
MUC1-220ENST00000498431 SPINK8P0C7L1 97 aa9.4□□□□□ -0.9
MUC1-220ENST00000498431 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.9
MUC1-220ENST00000498431 RETNLBQ9BQ08 111 aa9.4□□□□□ -0.9
MUC1-220ENST00000498431 ANAPC11Q9NYG5 84 aa9.4□□□□□ -0.9
MUC1-220ENST00000498431 PRSS2P07478 247 aa9.39□□□□□ -0.91
MUC1-220ENST00000498431 CRYGAP11844 174 aa9.38□□□□□ -0.91
MUC1-220ENST00000498431 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
MUC1-220ENST00000498431 TMEM223A0PJW6 202 aa9.37□□□□□ -0.91
MUC1-220ENST00000498431 AKR1D1P51857 326 aa9.37□□□□□ -0.91
MUC1-220ENST00000498431 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
MUC1-220ENST00000498431 LBHQ53QV2 105 aaPredicted RBP9.37□□□□□ -0.91
MUC1-220ENST00000498431 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
MUC1-220ENST00000498431 Q8IZM0 81 aa9.37□□□□□ -0.91
MUC1-220ENST00000498431 IGLV5-39A0A0G2JS06 123 aa9.36□□□□□ -0.91
MUC1-220ENST00000498431 BCE1O60756 84 aa9.36□□□□□ -0.91
MUC1-220ENST00000498431 RPL28P46779 137 aaKnown RBP9.36□□□□□ -0.91
MUC1-220ENST00000498431 CKS1BP61024 79 aa9.36□□□□□ -0.91
MUC1-220ENST00000498431 MRPL55Q7Z7F7 128 aaKnown RBP9.36□□□□□ -0.91
MUC1-220ENST00000498431 COX7B2Q8TF08 81 aa9.36□□□□□ -0.91
MUC1-220ENST00000498431 HERVK_113P61574 105 aa9.35□□□□□ -0.91
MUC1-220ENST00000498431 RPL37AP8A6NKH3 93 aa9.34□□□□□ -0.91
MUC1-220ENST00000498431 TP73-AS1Q9UF72 201 aa9.34□□□□□ -0.91
MUC1-220ENST00000498431 CXCL5P42830 114 aa9.33□□□□□ -0.92
MUC1-220ENST00000498431 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
MUC1-220ENST00000498431 LEPROTO15243 131 aa9.31□□□□□ -0.92
MUC1-220ENST00000498431 SCGB1D1O95968 90 aa9.31□□□□□ -0.92
MUC1-220ENST00000498431 PLEKHB2Q96CS7 222 aa9.31□□□□□ -0.92
MUC1-220ENST00000498431 CDIP1Q9H305 208 aa9.31□□□□□ -0.92
MUC1-220ENST00000498431 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
MUC1-220ENST00000498431 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
MUC1-220ENST00000498431 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
MUC1-220ENST00000498431 ATOH7Q8N100 152 aa9.3□□□□□ -0.92
MUC1-220ENST00000498431 E9PLD3 99 aa9.29□□□□□ -0.92
MUC1-220ENST00000498431 SFTA2Q6UW10 78 aa9.29□□□□□ -0.92
MUC1-220ENST00000498431 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
MUC1-220ENST00000498431 IGLV7-46A0A075B6I9 117 aa9.27□□□□□ -0.93
MUC1-220ENST00000498431 J3QQQ9 107 aa9.27□□□□□ -0.93
MUC1-220ENST00000498431 LGALS3P17931 250 aaKnown RBP9.27□□□□□ -0.93
MUC1-220ENST00000498431 JOSD1Q15040 202 aaPredicted RBP9.26□□□□□ -0.93
MUC1-220ENST00000498431 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
MUC1-220ENST00000498431 NDUFA12Q9UI09 145 aa9.26□□□□□ -0.93
MUC1-220ENST00000498431 HSBP1L1C9JCN9 74 aa9.25□□□□□ -0.93
MUC1-220ENST00000498431 UBE2AP49459 152 aa9.25□□□□□ -0.93
MUC1-220ENST00000498431 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
MUC1-220ENST00000498431 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
MUC1-220ENST00000498431 MYMXA0A1B0GTQ4 84 aa9.24□□□□□ -0.93
MUC1-220ENST00000498431 NMUP48645 174 aa9.24□□□□□ -0.93
MUC1-220ENST00000498431 HERV-K104P63124 156 aa9.24□□□□□ -0.93
MUC1-220ENST00000498431 IGLV5-37A0A075B6J1 123 aa9.23□□□□□ -0.93
MUC1-220ENST00000498431 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
MUC1-220ENST00000498431 IGKV2D-26A0A0A0MRZ7 120 aa9.22□□□□□ -0.93
MUC1-220ENST00000498431 ERG28Q9UKR5 140 aa9.22□□□□□ -0.93
MUC1-220ENST00000498431 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.94
MUC1-220ENST00000498431 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
MUC1-220ENST00000498431 IGKV2D-28P01615 120 aa9.21□□□□□ -0.94
MUC1-220ENST00000498431 PRLHP81277 87 aa9.21□□□□□ -0.94
MUC1-220ENST00000498431 COX17Q14061 63 aa9.2□□□□□ -0.94
MUC1-220ENST00000498431 PYY3Q5JQD4 70 aa9.2□□□□□ -0.94
MUC1-220ENST00000498431 NKAPP1Q8N9T2 125 aa9.2□□□□□ -0.94
MUC1-220ENST00000498431 PPDPFQ9H3Y8 114 aa9.2□□□□□ -0.94
MUC1-220ENST00000498431 PFN2P35080 140 aa9.19□□□□□ -0.94
MUC1-220ENST00000498431 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
MUC1-220ENST00000498431 C3orf22Q8N5N4 141 aa9.19□□□□□ -0.94
MUC1-220ENST00000498431 ZNF815PA8K554 130 aa9.18□□□□□ -0.94
MUC1-220ENST00000498431 LINC00158P58513 81 aa9.18□□□□□ -0.94
MUC1-220ENST00000498431 VAMP8Q9BV40 100 aa9.17□□□□□ -0.94
MUC1-220ENST00000498431 TTTY13Q9BZ97 58 aa9.17□□□□□ -0.94
MUC1-220ENST00000498431 A0A0J9YXY3 114 aa9.16□□□□□ -0.94
MUC1-220ENST00000498431 TMEM238C9JI98 176 aa9.16□□□□□ -0.94
MUC1-220ENST00000498431 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
MUC1-220ENST00000498431 A0A0U1RRA0 63 aa9.15□□□□□ -0.94
MUC1-220ENST00000498431 CTAG1AP78358 180 aa9.15□□□□□ -0.94
MUC1-220ENST00000498431 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
MUC1-220ENST00000498431 PCP2Q8IVA1 136 aa9.15□□□□□ -0.94
MUC1-220ENST00000498431 PAM16Q9Y3D7 125 aa9.15□□□□□ -0.94
MUC1-220ENST00000498431 LOC105371267A0A1B0GV96 52 aa9.14□□□□□ -0.95
MUC1-220ENST00000498431 SPATA45Q537H7 98 aa9.14□□□□□ -0.95
MUC1-220ENST00000498431 KRTAP4-1Q9BYQ7 146 aa9.14□□□□□ -0.95
MUC1-220ENST00000498431 TMEM126AQ9H061 195 aa9.14□□□□□ -0.95
MUC1-220ENST00000498431 TIMM17BO60830 172 aa9.13□□□□□ -0.95
MUC1-220ENST00000498431 LCE2DQ5TA82 110 aaPredicted RBP9.13□□□□□ -0.95
MUC1-220ENST00000498431 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
MUC1-220ENST00000498431 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
MUC1-220ENST00000498431 M0R378 163 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms