RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 DAND5Q8N907 189 aa12.26□□□□□ -0.45
CLIC4-204ENST00000497755 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
CLIC4-204ENST00000497755 Q8NBF4 154 aa12.24□□□□□ -0.45
CLIC4-204ENST00000497755 TRAV9-1A0A075B6T8 112 aa12.21□□□□□ -0.45
CLIC4-204ENST00000497755 NDUFA6P56556 154 aa12.21□□□□□ -0.45
CLIC4-204ENST00000497755 FA2HQ7L5A8 372 aa12.21□□□□□ -0.45
CLIC4-204ENST00000497755 ZNF706Q9Y5V0 76 aaPredicted RBP12.21□□□□□ -0.45
CLIC4-204ENST00000497755 SEC61BP60468 96 aaKnown RBP12.2□□□□□ -0.46
CLIC4-204ENST00000497755 CRCT1Q9UGL9 99 aa12.2□□□□□ -0.46
CLIC4-204ENST00000497755 SPINK1P00995 79 aa12.19□□□□□ -0.46
CLIC4-204ENST00000497755 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
CLIC4-204ENST00000497755 A0A096LNJ9 63 aa12.17□□□□□ -0.46
CLIC4-204ENST00000497755 LINC00158P58513 81 aa12.16□□□□□ -0.46
CLIC4-204ENST00000497755 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
CLIC4-204ENST00000497755 SMCR5Q8TEV8 140 aa12.16□□□□□ -0.46
CLIC4-204ENST00000497755 C11orf86A6NJI1 115 aa12.14□□□□□ -0.47
CLIC4-204ENST00000497755 A0A0U1RRA0 63 aa12.13□□□□□ -0.47
CLIC4-204ENST00000497755 SPRR1AP35321 89 aa12.13□□□□□ -0.47
CLIC4-204ENST00000497755 PRYO14603 147 aa12.12□□□□□ -0.47
CLIC4-204ENST00000497755 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
CLIC4-204ENST00000497755 LINC00483Q53H64 154 aa12.12□□□□□ -0.47
CLIC4-204ENST00000497755 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
CLIC4-204ENST00000497755 URB1-AS1Q96HZ7 61 aa12.12□□□□□ -0.47
CLIC4-204ENST00000497755 KRTAP4-16G5E9R7 235 aaPredicted RBP12.11□□□□□ -0.47
CLIC4-204ENST00000497755 KCNQ1DNQ9H478 68 aa12.11□□□□□ -0.47
CLIC4-204ENST00000497755 S100PP25815 95 aa12.1□□□□□ -0.47
CLIC4-204ENST00000497755 LCE2CQ5TA81 110 aa12.1□□□□□ -0.47
CLIC4-204ENST00000497755 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
CLIC4-204ENST00000497755 COX19Q49B96 90 aa12.09□□□□□ -0.47
CLIC4-204ENST00000497755 Q8N377 158 aa12.09□□□□□ -0.47
CLIC4-204ENST00000497755 HBDP02042 147 aa12.07□□□□□ -0.48
CLIC4-204ENST00000497755 LINC00614P0C842 121 aa12.07□□□□□ -0.48
CLIC4-204ENST00000497755 PMCHL1Q16048 86 aa12.07□□□□□ -0.48
CLIC4-204ENST00000497755 XP32Q5T750 250 aa12.07□□□□□ -0.48
CLIC4-204ENST00000497755 GAGE2AQ6NT46 116 aa12.07□□□□□ -0.48
CLIC4-204ENST00000497755 BOD1L2Q8IYS8 172 aa12.07□□□□□ -0.48
CLIC4-204ENST00000497755 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
CLIC4-204ENST00000497755 ETDCA0A1B0GVM5 59 aa12.06□□□□□ -0.48
CLIC4-204ENST00000497755 TMEM218A2RU14 115 aa12.06□□□□□ -0.48
CLIC4-204ENST00000497755 NCR3O14931 201 aa12.06□□□□□ -0.48
CLIC4-204ENST00000497755 SMIM13P0DJ93 91 aa12.06□□□□□ -0.48
CLIC4-204ENST00000497755 RPS29P62273 56 aaKnown RBP12.06□□□□□ -0.48
CLIC4-204ENST00000497755 MOBPQ13875 183 aa12.05□□□□□ -0.48
CLIC4-204ENST00000497755 SSBP3-AS1Q7Z2R9 100 aa12.05□□□□□ -0.48
CLIC4-204ENST00000497755 IGLV9-49A0A0B4J1Y8 123 aa12.04□□□□□ -0.48
CLIC4-204ENST00000497755 TMEM223A0PJW6 202 aa12.03□□□□□ -0.48
CLIC4-204ENST00000497755 SLC25A20O43772 301 aa12.03□□□□□ -0.48
CLIC4-204ENST00000497755 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
CLIC4-204ENST00000497755 CLLU1Q5K131 121 aa12.03□□□□□ -0.48
CLIC4-204ENST00000497755 FAM19A2Q8N3H0 131 aa12.03□□□□□ -0.48
CLIC4-204ENST00000497755 C18orf32Q8TCD1 76 aa12.03□□□□□ -0.48
CLIC4-204ENST00000497755 TRBV10-3A0A0K0K1G6 114 aa12.02□□□□□ -0.49
CLIC4-204ENST00000497755 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
CLIC4-204ENST00000497755 CHTOPQ9Y3Y2 248 aaKnown RBP12.02□□□□□ -0.49
CLIC4-204ENST00000497755 B5MCH6 92 aa12.01□□□□□ -0.49
CLIC4-204ENST00000497755 UQCC3Q6UW78 93 aa12.01□□□□□ -0.49
CLIC4-204ENST00000497755 MIR7-3HGQ8N6C7 128 aa12.01□□□□□ -0.49
CLIC4-204ENST00000497755 SEC11CQ9BY50 192 aa12.01□□□□□ -0.49
CLIC4-204ENST00000497755 KRTAP19-2Q3LHN2 52 aa12□□□□□ -0.49
CLIC4-204ENST00000497755 MEIG1Q5JSS6 88 aa11.98□□□□□ -0.49
CLIC4-204ENST00000497755 Q9BRP9 147 aa11.96□□□□□ -0.49
CLIC4-204ENST00000497755 TRAPPC1Q9Y5R8 145 aa11.96□□□□□ -0.49
CLIC4-204ENST00000497755 MT1HP80294 61 aa11.95□□□□□ -0.5
CLIC4-204ENST00000497755 HERV-K104P63124 156 aa11.94□□□□□ -0.5
CLIC4-204ENST00000497755 S100A12P80511 92 aa11.93□□□□□ -0.5
CLIC4-204ENST00000497755 TRAV12-1A0A0B4J245 112 aa11.92□□□□□ -0.5
CLIC4-204ENST00000497755 LINC00587B1AMM8 73 aa11.91□□□□□ -0.5
CLIC4-204ENST00000497755 RPS10P5Q9NQ39 176 aa11.91□□□□□ -0.5
CLIC4-204ENST00000497755 DDTP30046 118 aa11.9□□□□□ -0.5
CLIC4-204ENST00000497755 Q6ZRX8 168 aa11.9□□□□□ -0.5
CLIC4-204ENST00000497755 LOC107984156A0A0G2JMH3 177 aa11.89□□□□□ -0.51
CLIC4-204ENST00000497755 ARL17AQ8IVW1 177 aa11.89□□□□□ -0.51
CLIC4-204ENST00000497755 IFI27L1Q96BM0 104 aa11.89□□□□□ -0.51
CLIC4-204ENST00000497755 MAP1LC3CQ9BXW4 147 aa11.88□□□□□ -0.51
CLIC4-204ENST00000497755 TRBV10-2A0A0K0K1G8 114 aa11.87□□□□□ -0.51
CLIC4-204ENST00000497755 MYMXA0A1B0GTQ4 84 aa11.87□□□□□ -0.51
CLIC4-204ENST00000497755 RHEBQ15382 184 aa11.87□□□□□ -0.51
CLIC4-204ENST00000497755 PCOTHQ58A44 107 aa11.87□□□□□ -0.51
CLIC4-204ENST00000497755 C10orf91Q5T1B1 145 aa11.87□□□□□ -0.51
CLIC4-204ENST00000497755 C9orf153Q5TBE3 101 aa11.86□□□□□ -0.51
CLIC4-204ENST00000497755 CFC1BP0CG36 223 aa11.85□□□□□ -0.51
CLIC4-204ENST00000497755 IGLV8-61A0A075B6I0 122 aa11.84□□□□□ -0.51
CLIC4-204ENST00000497755 IGLV6-57P01721 117 aa11.82□□□□□ -0.52
CLIC4-204ENST00000497755 LORP23490 312 aaPredicted RBP11.82□□□□□ -0.52
CLIC4-204ENST00000497755 TSPEAR-AS2P59090 65 aa11.82□□□□□ -0.52
CLIC4-204ENST00000497755 IFITM2Q01629 132 aa11.82□□□□□ -0.52
CLIC4-204ENST00000497755 ST20-AS1Q8NBB2 130 aa11.82□□□□□ -0.52
CLIC4-204ENST00000497755 CHCHD1Q96BP2 118 aaKnown RBP11.81□□□□□ -0.52
CLIC4-204ENST00000497755 JOSD1Q15040 202 aaPredicted RBP11.8□□□□□ -0.52
CLIC4-204ENST00000497755 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
CLIC4-204ENST00000497755 KRTAP10-6P60371 365 aaPredicted RBP11.79□□□□□ -0.52
CLIC4-204ENST00000497755 S100A7L2Q5SY68 101 aa11.78□□□□□ -0.52
CLIC4-204ENST00000497755 COMMD7Q86VX2 200 aa11.78□□□□□ -0.52
CLIC4-204ENST00000497755 TRAV23DV6A0A075B6W5 121 aa11.77□□□□□ -0.53
CLIC4-204ENST00000497755 C9orf92A6NGG3 77 aa11.77□□□□□ -0.53
CLIC4-204ENST00000497755 LEPROTO15243 131 aa11.76□□□□□ -0.53
CLIC4-204ENST00000497755 NDUFC2O95298 119 aa11.76□□□□□ -0.53
CLIC4-204ENST00000497755 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
CLIC4-204ENST00000497755 ZNF73O43830 326 aaPredicted RBP11.74□□□□□ -0.53
CLIC4-204ENST00000497755 HRCT1Q6UXD1 115 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms