RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-208ENST00000497700 SPAG11BQ08648 103 aa11.46□□□□□ -0.57
ELL3-208ENST00000497700 CFAP161Q6P656 301 aa11.46□□□□□ -0.57
ELL3-208ENST00000497700 C15orf56Q8N910 161 aa11.46□□□□□ -0.57
ELL3-208ENST00000497700 SMIM13P0DJ93 91 aa11.45□□□□□ -0.58
ELL3-208ENST00000497700 CXCL5P42830 114 aa11.45□□□□□ -0.58
ELL3-208ENST00000497700 HIST1H4GQ99525 98 aa11.45□□□□□ -0.58
ELL3-208ENST00000497700 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
ELL3-208ENST00000497700 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
ELL3-208ENST00000497700 CKS1BP61024 79 aa11.44□□□□□ -0.58
ELL3-208ENST00000497700 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
ELL3-208ENST00000497700 C9orf118A6NHY6 69 aa11.43□□□□□ -0.58
ELL3-208ENST00000497700 TIMM17BO60830 172 aa11.43□□□□□ -0.58
ELL3-208ENST00000497700 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
ELL3-208ENST00000497700 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
ELL3-208ENST00000497700 GVQW2A0A096LPI5 108 aaPredicted RBP11.42□□□□□ -0.58
ELL3-208ENST00000497700 ZNF561-AS1K7EIQ3 104 aa11.41□□□□□ -0.58
ELL3-208ENST00000497700 UBE2V1Q13404 147 aa11.41□□□□□ -0.58
ELL3-208ENST00000497700 HIGD2BQ4VC39 106 aa11.41□□□□□ -0.58
ELL3-208ENST00000497700 SDIM1Q6ZPB5 146 aa11.41□□□□□ -0.58
ELL3-208ENST00000497700 LINC00526Q96FQ7 95 aa11.41□□□□□ -0.58
ELL3-208ENST00000497700 LITAFQ99732 161 aa11.41□□□□□ -0.58
ELL3-208ENST00000497700 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
ELL3-208ENST00000497700 A6NJY4 79 aa11.4□□□□□ -0.58
ELL3-208ENST00000497700 TMEM238C9JI98 176 aa11.4□□□□□ -0.58
ELL3-208ENST00000497700 FXYD2P54710 66 aa11.4□□□□□ -0.58
ELL3-208ENST00000497700 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
ELL3-208ENST00000497700 CIRBPQ14011 172 aaKnown RBP11.4□□□□□ -0.58
ELL3-208ENST00000497700 VAMP3Q15836 100 aa11.4□□□□□ -0.58
ELL3-208ENST00000497700 C2orf48Q96LS8 159 aa11.4□□□□□ -0.58
ELL3-208ENST00000497700 F8WDY8 70 aa11.39□□□□□ -0.59
ELL3-208ENST00000497700 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
ELL3-208ENST00000497700 MEIG1Q5JSS6 88 aa11.39□□□□□ -0.59
ELL3-208ENST00000497700 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
ELL3-208ENST00000497700 UNQ6190/PRO20217Q6UXQ8 127 aa11.38□□□□□ -0.59
ELL3-208ENST00000497700 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
ELL3-208ENST00000497700 C10orf25Q5T742 122 aa11.37□□□□□ -0.59
ELL3-208ENST00000497700 SPANXDQ9BXN6 97 aa11.37□□□□□ -0.59
ELL3-208ENST00000497700 SPANXCQ9NY87 97 aa11.37□□□□□ -0.59
ELL3-208ENST00000497700 SLPIP03973 132 aa11.36□□□□□ -0.59
ELL3-208ENST00000497700 Q6ZVH6 145 aa11.36□□□□□ -0.59
ELL3-208ENST00000497700 CAMK2N2Q96S95 79 aa11.36□□□□□ -0.59
ELL3-208ENST00000497700 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
ELL3-208ENST00000497700 NHP2Q9NX24 153 aaKnown RBP11.35□□□□□ -0.59
ELL3-208ENST00000497700 A0A0U1RRA0 63 aa11.34□□□□□ -0.59
ELL3-208ENST00000497700 LINC00158P58513 81 aa11.34□□□□□ -0.59
ELL3-208ENST00000497700 GTF2H5Q6ZYL4 71 aa11.34□□□□□ -0.59
ELL3-208ENST00000497700 A0A087WYN8 130 aa11.33□□□□□ -0.6
ELL3-208ENST00000497700 TRBV30A0A0K0K1B3 111 aa11.33□□□□□ -0.6
ELL3-208ENST00000497700 PFN2P35080 140 aa11.33□□□□□ -0.6
ELL3-208ENST00000497700 CNBPP62633 177 aaKnown RBP11.33□□□□□ -0.6
ELL3-208ENST00000497700 SYCNQ0VAF6 134 aa11.33□□□□□ -0.6
ELL3-208ENST00000497700 COX17Q14061 63 aa11.33□□□□□ -0.6
ELL3-208ENST00000497700 Q6ZRU5 148 aa11.33□□□□□ -0.6
ELL3-208ENST00000497700 C6orf48Q9UBA6 75 aa11.33□□□□□ -0.6
ELL3-208ENST00000497700 H3BUT2 72 aa11.32□□□□□ -0.6
ELL3-208ENST00000497700 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
ELL3-208ENST00000497700 DAND5Q8N907 189 aa11.32□□□□□ -0.6
ELL3-208ENST00000497700 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
ELL3-208ENST00000497700 A0A1W2PPM0 123 aa11.31□□□□□ -0.6
ELL3-208ENST00000497700 GAGE10A6NGK3 116 aa11.31□□□□□ -0.6
ELL3-208ENST00000497700 FABP2P12104 132 aa11.31□□□□□ -0.6
ELL3-208ENST00000497700 IFITM1P13164 125 aa11.31□□□□□ -0.6
ELL3-208ENST00000497700 MUSTN1Q8IVN3 82 aa11.31□□□□□ -0.6
ELL3-208ENST00000497700 MIR7-3HGQ8N6C7 128 aa11.31□□□□□ -0.6
ELL3-208ENST00000497700 RAB37Q96AX2 223 aa11.31□□□□□ -0.6
ELL3-208ENST00000497700 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
ELL3-208ENST00000497700 SPACA4Q8TDM5 124 aa11.3□□□□□ -0.6
ELL3-208ENST00000497700 LRP2P98164 4655 aa11.3□□□□□ -0.6
ELL3-208ENST00000497700 RPL24P83731 157 aaKnown RBP11.29□□□□□ -0.6
ELL3-208ENST00000497700 LINC00308Q8TCZ7 52 aa11.29□□□□□ -0.6
ELL3-208ENST00000497700 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
ELL3-208ENST00000497700 PPDPFQ9H3Y8 114 aa11.29□□□□□ -0.6
ELL3-208ENST00000497700 TNXBP22105 4242 aa11.29□□□□□ -0.6
ELL3-208ENST00000497700 K7EP34 96 aa11.28□□□□□ -0.6
ELL3-208ENST00000497700 COPS9Q8WXC6 57 aa11.28□□□□□ -0.6
ELL3-208ENST00000497700 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
ELL3-208ENST00000497700 NPC2P61916 151 aa11.27□□□□□ -0.61
ELL3-208ENST00000497700 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.61
ELL3-208ENST00000497700 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
ELL3-208ENST00000497700 K7ERJ3 54 aa11.26□□□□□ -0.61
ELL3-208ENST00000497700 A4D1N5 150 aa11.25□□□□□ -0.61
ELL3-208ENST00000497700 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
ELL3-208ENST00000497700 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
ELL3-208ENST00000497700 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
ELL3-208ENST00000497700 SND1-IT1Q9HBX3 110 aa11.24□□□□□ -0.61
ELL3-208ENST00000497700 PLAC8Q9NZF1 115 aa11.24□□□□□ -0.61
ELL3-208ENST00000497700 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
ELL3-208ENST00000497700 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
ELL3-208ENST00000497700 TLX1NBP0CAT3 122 aa11.23□□□□□ -0.61
ELL3-208ENST00000497700 LYRM7Q5U5X0 104 aa11.23□□□□□ -0.61
ELL3-208ENST00000497700 RNF213Q63HN8 5207 aa11.23□□□□□ -0.61
ELL3-208ENST00000497700 A0A0B4J2C4 111 aa11.22□□□□□ -0.61
ELL3-208ENST00000497700 PRO1854Q9UHT4 67 aa11.21□□□□□ -0.61
ELL3-208ENST00000497700 CFC1BP0CG36 223 aa11.2□□□□□ -0.62
ELL3-208ENST00000497700 CFC1P0CG37 223 aa11.2□□□□□ -0.62
ELL3-208ENST00000497700 C7orf33Q8WU49 177 aa11.2□□□□□ -0.62
ELL3-208ENST00000497700 NAA38Q9BRA0 125 aaKnown RBP11.2□□□□□ -0.62
ELL3-208ENST00000497700 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
ELL3-208ENST00000497700 Q6ZRP5 223 aa11.18□□□□□ -0.62
ELL3-208ENST00000497700 A0A096LNI7 61 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms