RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CMC2Q9NRP2 79 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 NUP188Q5SRE5 1749 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 TOP2AP11388 1531 aaKnown RBP1.39□□□□□ -2.19
VPS36-206ENST00000497149 ZMYM4Q5VZL5 1548 aa1.39□□□□□ -2.19
VPS36-206ENST00000497149 COL14A1Q05707 1796 aaKnown RBP1.39□□□□□ -2.19
VPS36-206ENST00000497149 ZNF236Q9UL36 1845 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 IFT172Q9UG01 1749 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 CADP27708 2225 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 LCE6AA0A183 80 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 A0A1B0GU69 56 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 RPL38P63173 70 aaKnown RBP1.38□□□□□ -2.19
VPS36-206ENST00000497149 ENHOQ6UWT2 76 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 SCN7AQ01118 1682 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 ITSN2Q9NZM3 1697 aa1.38□□□□□ -2.19
VPS36-206ENST00000497149 PKD1L3Q7Z443 1732 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 MROH2AA6NES4 1674 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 K7EMI3 77 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 HCRTO43612 131 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 UNQ6190/PRO20217Q6UXQ8 127 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 Q6ZRX8 168 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 ANKRD17O75179 2603 aaKnown RBP1.37□□□□□ -2.19
VPS36-206ENST00000497149 ASXL3Q9C0F0 2248 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 CEP170BQ9Y4F5 1589 aaPredicted RBP1.37□□□□□ -2.19
VPS36-206ENST00000497149 TIAM2Q8IVF5 1701 aa1.37□□□□□ -2.19
VPS36-206ENST00000497149 BCORQ6W2J9 1755 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 LRRC7Q96NW7 1537 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 C5P01031 1676 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 LRRC37A2A6NM11 1700 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 HAMPP81172 84 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 SAMD9Q5K651 1589 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 RICTORQ6R327 1708 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 OBSCN-AS1Q96MR7 158 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 LRP6O75581 1613 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 PHRF1Q9P1Y6 1649 aaKnown RBP1.36□□□□□ -2.19
VPS36-206ENST00000497149 ALKQ9UM73 1620 aa1.36□□□□□ -2.19
VPS36-206ENST00000497149 EFCAB6Q5THR3 1501 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 A0A096LNT2 108 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 COX7BP24311 80 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 ABRACLQ9P1F3 81 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 ADCY10Q96PN6 1610 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 CICQ96RK0 1608 aaPredicted RBP1.35□□□□□ -2.19
VPS36-206ENST00000497149 TECTAO75443 2155 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 ZDBF2Q9HCK1 2354 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 CROCC2H7BZ55 1655 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 WIZO95785 1651 aa1.35□□□□□ -2.19
VPS36-206ENST00000497149 TENM1Q9UKZ4 2725 aa1.34□□□□□ -2.19
VPS36-206ENST00000497149 NAV3Q8IVL0 2385 aa1.34□□□□□ -2.19
VPS36-206ENST00000497149 BIVM-ERCC5R4GMW8 1640 aa1.34□□□□□ -2.19
VPS36-206ENST00000497149 PLNP26678 52 aa1.34□□□□□ -2.19
VPS36-206ENST00000497149 KRTAP10-4P60372 401 aaPredicted RBP1.34□□□□□ -2.19
VPS36-206ENST00000497149 LINC00575Q6W349 94 aa1.34□□□□□ -2.19
VPS36-206ENST00000497149 SSBP3-AS1Q7Z2R9 100 aa1.34□□□□□ -2.19
VPS36-206ENST00000497149 ANKRD36CQ5JPF3 1778 aa1.34□□□□□ -2.2
VPS36-206ENST00000497149 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
VPS36-206ENST00000497149 FMN2Q9NZ56 1722 aa1.33□□□□□ -2.2
VPS36-206ENST00000497149 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
VPS36-206ENST00000497149 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
VPS36-206ENST00000497149 NDUFA4O00483 81 aa1.33□□□□□ -2.2
VPS36-206ENST00000497149 MRPL33O75394 65 aaKnown RBP1.33□□□□□ -2.2
VPS36-206ENST00000497149 KIAA0556O60303 1618 aa1.33□□□□□ -2.2
VPS36-206ENST00000497149 NHSL1Q5SYE7 1610 aa1.33□□□□□ -2.2
VPS36-206ENST00000497149 KMT2BQ9UMN6 2715 aaPredicted RBP1.32□□□□□ -2.2
VPS36-206ENST00000497149 PARP4Q9UKK3 1724 aaKnown RBP1.32□□□□□ -2.2
VPS36-206ENST00000497149 DOPEY2Q9Y3R5 2298 aa1.32□□□□□ -2.2
VPS36-206ENST00000497149 ABCC6O95255 1503 aa1.32□□□□□ -2.2
VPS36-206ENST00000497149 SMIM27A0A1W2PRY6 76 aa1.32□□□□□ -2.2
VPS36-206ENST00000497149 DEFB114Q30KQ6 69 aa1.32□□□□□ -2.2
VPS36-206ENST00000497149 PLXNB2O15031 1838 aa1.31□□□□□ -2.2
VPS36-206ENST00000497149 KIAA0586Q9BVV6 1533 aa1.31□□□□□ -2.2
VPS36-206ENST00000497149 ABCA5Q8WWZ7 1642 aa1.31□□□□□ -2.2
VPS36-206ENST00000497149 CPSF4LA6NMK7 179 aaKnown RBP1.31□□□□□ -2.2
VPS36-206ENST00000497149 H0YGX0 51 aa1.31□□□□□ -2.2
VPS36-206ENST00000497149 FXYD6P3P58550 94 aa1.31□□□□□ -2.2
VPS36-206ENST00000497149 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
VPS36-206ENST00000497149 POLR1AO95602 1720 aaPredicted RBP1.31□□□□□ -2.2
VPS36-206ENST00000497149 A0A0G2JMZ2 1700 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 TJP1Q07157 1748 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 ETDCA0A1B0GVM5 59 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 G3V318 75 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 I3L3M4 83 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 LY6G6CO95867 125 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 KCNQ1DNQ9H478 68 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
VPS36-206ENST00000497149 COL6A6A6NMZ7 2263 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 C3P01024 1663 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 ZFHX3Q15911 3703 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 PAPPA2Q9BXP8 1791 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 SPTY2D1-AS1A0A0U1RR47 76 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 M0R1W7 72 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 CRIPTQ9P021 101 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 IQGAP2Q13576 1575 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 ERCC6L2Q5T890 1561 aa1.29□□□□□ -2.2
VPS36-206ENST00000497149 EIF2AK4Q9P2K8 1649 aaKnown RBP1.29□□□□□ -2.2
VPS36-206ENST00000497149 CNOT1A5YKK6 2376 aaKnown RBP1.28□□□□□ -2.2
VPS36-206ENST00000497149 IGIPA6NJ69 53 aa1.28□□□□□ -2.2
VPS36-206ENST00000497149 RPL37P61927 97 aaKnown RBP1.28□□□□□ -2.2
VPS36-206ENST00000497149 LY75O60449 1722 aa1.27□□□□□ -2.21
VPS36-206ENST00000497149 NRAPQ86VF7 1730 aa1.27□□□□□ -2.21
VPS36-206ENST00000497149 ZNF831Q5JPB2 1677 aa1.27□□□□□ -2.21
VPS36-206ENST00000497149 ABCC8Q09428 1581 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms