RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 LY6G6CO95867 125 aa5.64□□□□□ -1.51
USP54-215ENST00000497106 ADAMTSL4-AS1Q5T5F5 129 aa5.64□□□□□ -1.51
USP54-215ENST00000497106 NCR3O14931 201 aa5.63□□□□□ -1.51
USP54-215ENST00000497106 UQCRQO14949 82 aa5.63□□□□□ -1.51
USP54-215ENST00000497106 Q8N3U1 123 aa5.63□□□□□ -1.51
USP54-215ENST00000497106 C1orf134Q5TEV5 83 aa5.63□□□□□ -1.51
USP54-215ENST00000497106 GAGE2AQ6NT46 116 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 LITAFQ99732 161 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 OTOGQ6ZRI0 2925 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 H3BT86 120 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 TRACP01848 142 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 INAFM2P0DMQ5 153 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 Q6ZRU5 148 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 C6orf223Q8N319 242 aa5.62□□□□□ -1.51
USP54-215ENST00000497106 ETDCA0A1B0GVM5 59 aa5.61□□□□□ -1.51
USP54-215ENST00000497106 LINC01620Q4KN68 170 aa5.61□□□□□ -1.51
USP54-215ENST00000497106 LINC00526Q96FQ7 95 aa5.61□□□□□ -1.51
USP54-215ENST00000497106 UBE2BP63146 152 aa5.61□□□□□ -1.51
USP54-215ENST00000497106 KIAA0087Q14695 138 aa5.61□□□□□ -1.51
USP54-215ENST00000497106 ORMDL1Q9P0S3 153 aa5.61□□□□□ -1.51
USP54-215ENST00000497106 RPL28P46779 137 aaKnown RBP5.6□□□□□ -1.51
USP54-215ENST00000497106 SMCPP49901 116 aaPredicted RBP5.6□□□□□ -1.51
USP54-215ENST00000497106 ANKRD29Q8N6D5 301 aa5.6□□□□□ -1.51
USP54-215ENST00000497106 COX7BP24311 80 aa5.6□□□□□ -1.51
USP54-215ENST00000497106 HRCT1Q6UXD1 115 aa5.6□□□□□ -1.51
USP54-215ENST00000497106 C6orf48Q9UBA6 75 aa5.6□□□□□ -1.51
USP54-215ENST00000497106 TRIAP1O43715 76 aa5.59□□□□□ -1.51
USP54-215ENST00000497106 XAGE1AQ9HD64 81 aa5.59□□□□□ -1.51
USP54-215ENST00000497106 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.51
USP54-215ENST00000497106 M0R2N4 97 aa5.59□□□□□ -1.51
USP54-215ENST00000497106 MXRA5Q9NR99 2828 aa5.59□□□□□ -1.51
USP54-215ENST00000497106 LECT2O14960 151 aa5.58□□□□□ -1.52
USP54-215ENST00000497106 TCL1BO95988 128 aa5.58□□□□□ -1.52
USP54-215ENST00000497106 TMEM258P61165 79 aa5.58□□□□□ -1.52
USP54-215ENST00000497106 C9orf116Q5BN46 136 aaPredicted RBP5.58□□□□□ -1.52
USP54-215ENST00000497106 TLX1NBP0CAT3 122 aa5.58□□□□□ -1.52
USP54-215ENST00000497106 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
USP54-215ENST00000497106 IMUPQ9GZP8 106 aa5.58□□□□□ -1.52
USP54-215ENST00000497106 COL6A5A8TX70 2615 aa5.58□□□□□ -1.52
USP54-215ENST00000497106 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.57□□□□□ -1.52
USP54-215ENST00000497106 LST1O00453 97 aa5.57□□□□□ -1.52
USP54-215ENST00000497106 F8WEM9 126 aa5.57□□□□□ -1.52
USP54-215ENST00000497106 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
USP54-215ENST00000497106 SMIM11BQ8TCY0 68 aa5.57□□□□□ -1.52
USP54-215ENST00000497106 BAALC-AS2P0C853 105 aa5.57□□□□□ -1.52
USP54-215ENST00000497106 TRBV7-7A0A0K0K1E9 115 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 PRYO14603 147 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 LAMTOR3Q9UHA4 124 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 IGKV2-24A0A0C4DH68 120 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 FAM236AA0A1B0GUQ0 79 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 FAM236BA0A1B0GV22 79 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 C1orf195Q5TG92 126 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 hADV29S1A0JD25 119 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 TMEM256-PLSCR3K7ERE1 68 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 DHRS4-AS1Q9P1J3 65 aa5.56□□□□□ -1.52
USP54-215ENST00000497106 C10orf25Q5T742 122 aa5.55□□□□□ -1.52
USP54-215ENST00000497106 CLEC2BQ92478 149 aa5.55□□□□□ -1.52
USP54-215ENST00000497106 JMJD7-PLA2G4BH0Y9G9 81 aa5.55□□□□□ -1.52
USP54-215ENST00000497106 ZNF73O43830 326 aaPredicted RBP5.55□□□□□ -1.52
USP54-215ENST00000497106 SOSTDC1Q6X4U4 206 aa5.55□□□□□ -1.52
USP54-215ENST00000497106 TRBV7-6A0A0J9YX20 115 aa5.55□□□□□ -1.52
USP54-215ENST00000497106 CRYGAP11844 174 aa5.54□□□□□ -1.52
USP54-215ENST00000497106 COX7CP15954 63 aa5.54□□□□□ -1.52
USP54-215ENST00000497106 CNBPP62633 177 aaKnown RBP5.54□□□□□ -1.52
USP54-215ENST00000497106 C6orf99Q4VX62 202 aa5.54□□□□□ -1.52
USP54-215ENST00000497106 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
USP54-215ENST00000497106 IGLV5-52A0A0A0MRZ9 124 aa5.54□□□□□ -1.52
USP54-215ENST00000497106 LINC00337Q8N6G1 96 aa5.54□□□□□ -1.52
USP54-215ENST00000497106 C16orf90A8MZG2 172 aa5.54□□□□□ -1.52
USP54-215ENST00000497106 TRBV10-3A0A0K0K1G6 114 aa5.53□□□□□ -1.52
USP54-215ENST00000497106 PDE6GP18545 87 aa5.53□□□□□ -1.52
USP54-215ENST00000497106 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.53□□□□□ -1.52
USP54-215ENST00000497106 UBE2AP49459 152 aa5.53□□□□□ -1.52
USP54-215ENST00000497106 STAB1Q9NY15 2570 aa5.53□□□□□ -1.52
USP54-215ENST00000497106 ACYP1P07311 99 aa5.52□□□□□ -1.53
USP54-215ENST00000497106 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
USP54-215ENST00000497106 FAM240AA0A1B0GVK7 77 aa5.52□□□□□ -1.53
USP54-215ENST00000497106 Q5XG85 94 aa5.52□□□□□ -1.53
USP54-215ENST00000497106 KRTAP26-1Q6PEX3 210 aa5.51□□□□□ -1.53
USP54-215ENST00000497106 C7orf33Q8WU49 177 aa5.51□□□□□ -1.53
USP54-215ENST00000497106 MGAM2Q2M2H8 2515 aa5.51□□□□□ -1.53
USP54-215ENST00000497106 DSCR8Q96T75 97 aa5.51□□□□□ -1.53
USP54-215ENST00000497106 ATOX1O00244 68 aa5.51□□□□□ -1.53
USP54-215ENST00000497106 LINC00476Q8WZB0 136 aa5.51□□□□□ -1.53
USP54-215ENST00000497106 VPREB1P12018 145 aa5.5□□□□□ -1.53
USP54-215ENST00000497106 IGKV2-28A0A075B6P5 120 aa5.5□□□□□ -1.53
USP54-215ENST00000497106 IGKV2D-28P01615 120 aa5.5□□□□□ -1.53
USP54-215ENST00000497106 REG3GQ6UW15 175 aa5.5□□□□□ -1.53
USP54-215ENST00000497106 CASC10Q5T4H9 136 aa5.5□□□□□ -1.53
USP54-215ENST00000497106 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 NBPF19A0A087WUL8 3843 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 Q8N814 137 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 C22orf24Q9Y442 160 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 Q6ZRP5 223 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 FAM19A1Q7Z5A9 133 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 ZNF706Q9Y5V0 76 aaPredicted RBP5.49□□□□□ -1.53
USP54-215ENST00000497106 IGLV5-37A0A075B6J1 123 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 A0A087WTM6 91 aa5.49□□□□□ -1.53
USP54-215ENST00000497106 RTL8CO15255 209 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms