RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 SERP1Q9Y6X1 66 aa14□□□□□ -0.17
LYSMD4-209ENST00000496108 DEFB113Q30KQ7 82 aa14□□□□□ -0.17
LYSMD4-209ENST00000496108 C9orf66Q5T8R8 295 aa14□□□□□ -0.17
LYSMD4-209ENST00000496108 HRCT1Q6UXD1 115 aa14□□□□□ -0.17
LYSMD4-209ENST00000496108 LAMTOR3Q9UHA4 124 aa14□□□□□ -0.17
LYSMD4-209ENST00000496108 C9orf116Q5BN46 136 aaPredicted RBP13.99□□□□□ -0.17
LYSMD4-209ENST00000496108 Q6ZVQ6 151 aa13.99□□□□□ -0.17
LYSMD4-209ENST00000496108 LINC00269Q8N2A0 174 aa13.99□□□□□ -0.17
LYSMD4-209ENST00000496108 CXCL6P80162 114 aa13.99□□□□□ -0.17
LYSMD4-209ENST00000496108 ITPR3Q14573 2671 aa13.97□□□□□ -0.17
LYSMD4-209ENST00000496108 IGLV6-57P01721 117 aa13.96□□□□□ -0.17
LYSMD4-209ENST00000496108 M0R2N4 97 aa13.95□□□□□ -0.18
LYSMD4-209ENST00000496108 HAMPP81172 84 aa13.95□□□□□ -0.18
LYSMD4-209ENST00000496108 REG3AQ06141 175 aa13.94□□□□□ -0.18
LYSMD4-209ENST00000496108 WNK1Q9H4A3 2382 aa13.94□□□□□ -0.18
LYSMD4-209ENST00000496108 ESM1Q9NQ30 184 aa13.93□□□□□ -0.18
LYSMD4-209ENST00000496108 A0A096LPF7 62 aa13.92□□□□□ -0.18
LYSMD4-209ENST00000496108 A0A0J9YWU9 116 aa13.92□□□□□ -0.18
LYSMD4-209ENST00000496108 IGHV4-30-4P0DP06 118 aa13.92□□□□□ -0.18
LYSMD4-209ENST00000496108 Q6ZQY7 126 aa13.92□□□□□ -0.18
LYSMD4-209ENST00000496108 TLN2Q9Y4G6 2542 aa13.92□□□□□ -0.18
LYSMD4-209ENST00000496108 FLNAP21333 2647 aaKnown RBP13.91□□□□□ -0.18
LYSMD4-209ENST00000496108 IGLV10-54A0A075B6I4 117 aa13.91□□□□□ -0.18
LYSMD4-209ENST00000496108 TRAV10A0A0B4J240 114 aa13.91□□□□□ -0.18
LYSMD4-209ENST00000496108 ANGP03950 147 aaKnown RBP13.91□□□□□ -0.18
LYSMD4-209ENST00000496108 LINC01006Q8NI28 216 aa13.91□□□□□ -0.18
LYSMD4-209ENST00000496108 HIVEP1P15822 2718 aa13.9□□□□□ -0.18
LYSMD4-209ENST00000496108 C16orf95Q9H693 158 aa13.9□□□□□ -0.18
LYSMD4-209ENST00000496108 F8P00451 2351 aa13.9□□□□□ -0.18
LYSMD4-209ENST00000496108 SPAG11BQ08648 103 aa13.89□□□□□ -0.19
LYSMD4-209ENST00000496108 X6R8D5 127 aa13.89□□□□□ -0.19
LYSMD4-209ENST00000496108 JMJD1CQ15652 2540 aa13.89□□□□□ -0.19
LYSMD4-209ENST00000496108 C10orf25Q5T742 122 aa13.88□□□□□ -0.19
LYSMD4-209ENST00000496108 UNQ6190/PRO20217Q6UXQ8 127 aa13.88□□□□□ -0.19
LYSMD4-209ENST00000496108 KRTAP1-3Q8IUG1 177 aa13.88□□□□□ -0.19
LYSMD4-209ENST00000496108 TRBV7-4A0A0J9YYF1 115 aa13.87□□□□□ -0.19
LYSMD4-209ENST00000496108 MRAPQ8TCY5 172 aa13.87□□□□□ -0.19
LYSMD4-209ENST00000496108 NDUFC1O43677 76 aa13.87□□□□□ -0.19
LYSMD4-209ENST00000496108 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.87□□□□□ -0.19
LYSMD4-209ENST00000496108 WFDC11Q8NEX6 87 aa13.87□□□□□ -0.19
LYSMD4-209ENST00000496108 SPATA3Q8NHX4 192 aa13.87□□□□□ -0.19
LYSMD4-209ENST00000496108 ACANP16112 2415 aa13.86□□□□□ -0.19
LYSMD4-209ENST00000496108 LYRM9A8MSI8 78 aa13.86□□□□□ -0.19
LYSMD4-209ENST00000496108 Q8N3U1 123 aa13.86□□□□□ -0.19
LYSMD4-209ENST00000496108 DIRC1Q969H9 104 aa13.86□□□□□ -0.19
LYSMD4-209ENST00000496108 TEP1Q99973 2627 aaKnown RBP13.85□□□□□ -0.19
LYSMD4-209ENST00000496108 GVQW2A0A096LPI5 108 aaPredicted RBP13.84□□□□□ -0.19
LYSMD4-209ENST00000496108 RMI2Q96E14 147 aa13.84□□□□□ -0.19
LYSMD4-209ENST00000496108 SNURFQ9Y675 71 aa13.84□□□□□ -0.19
LYSMD4-209ENST00000496108 ZNF469Q96JG9 3925 aaPredicted RBP13.84□□□□□ -0.19
LYSMD4-209ENST00000496108 F8WEM9 126 aa13.83□□□□□ -0.2
LYSMD4-209ENST00000496108 ATP5EP56381 51 aaPredicted RBP13.82□□□□□ -0.2
LYSMD4-209ENST00000496108 SMIM26A0A096LP01 95 aa13.81□□□□□ -0.2
LYSMD4-209ENST00000496108 TRBV7-6A0A0J9YX20 115 aa13.81□□□□□ -0.2
LYSMD4-209ENST00000496108 COX7BP24311 80 aa13.79□□□□□ -0.2
LYSMD4-209ENST00000496108 ELOF1P60002 83 aaKnown RBP13.79□□□□□ -0.2
LYSMD4-209ENST00000496108 ZNF73O43830 326 aaPredicted RBP13.78□□□□□ -0.2
LYSMD4-209ENST00000496108 TM2D3Q9BRN9 247 aa13.78□□□□□ -0.2
LYSMD4-209ENST00000496108 ERC2-IT1O76042 136 aa13.77□□□□□ -0.21
LYSMD4-209ENST00000496108 PRR34Q9NV39 138 aa13.76□□□□□ -0.21
LYSMD4-209ENST00000496108 MTORP42345 2549 aa13.76□□□□□ -0.21
LYSMD4-209ENST00000496108 PRO0628Q9UI54 55 aa13.76□□□□□ -0.21
LYSMD4-209ENST00000496108 MIFP14174 115 aa13.75□□□□□ -0.21
LYSMD4-209ENST00000496108 NREPQ16612 68 aa13.75□□□□□ -0.21
LYSMD4-209ENST00000496108 LELP1Q5T871 98 aa13.74□□□□□ -0.21
LYSMD4-209ENST00000496108 FP248Q71RG6 208 aaPredicted RBP13.74□□□□□ -0.21
LYSMD4-209ENST00000496108 C6orf48Q9UBA6 75 aa13.74□□□□□ -0.21
LYSMD4-209ENST00000496108 NIPBLQ6KC79 2804 aaeCLIP13.74□□□□□ -0.21
LYSMD4-209ENST00000496108 SCXQ7RTU7 201 aa13.74□□□□□ -0.21
LYSMD4-209ENST00000496108 CUBNO60494 3623 aa13.72□□□□□ -0.21
LYSMD4-209ENST00000496108 LINC00336Q6ZUF6 198 aa13.72□□□□□ -0.21
LYSMD4-209ENST00000496108 BPY2O14599 106 aa13.71□□□□□ -0.21
LYSMD4-209ENST00000496108 DAD1P61803 113 aa13.71□□□□□ -0.22
LYSMD4-209ENST00000496108 TMEM254Q8TBM7 123 aa13.71□□□□□ -0.22
LYSMD4-209ENST00000496108 XAGE1AQ9HD64 81 aa13.71□□□□□ -0.22
LYSMD4-209ENST00000496108 SMR3AQ99954 134 aa13.7□□□□□ -0.22
LYSMD4-209ENST00000496108 KLK12Q9UKR0 248 aa13.68□□□□□ -0.22
LYSMD4-209ENST00000496108 VPREB1P12018 145 aa13.68□□□□□ -0.22
LYSMD4-209ENST00000496108 CELA1Q9UNI1 258 aa13.67□□□□□ -0.22
LYSMD4-209ENST00000496108 SONP18583 2426 aaKnown RBP13.67□□□□□ -0.22
LYSMD4-209ENST00000496108 NF1P21359 2839 aa13.67□□□□□ -0.22
LYSMD4-209ENST00000496108 NSD1Q96L73 2696 aaPredicted RBP13.66□□□□□ -0.22
LYSMD4-209ENST00000496108 LINC00528Q8N1L1 170 aa13.66□□□□□ -0.22
LYSMD4-209ENST00000496108 M0R378 163 aa13.65□□□□□ -0.22
LYSMD4-209ENST00000496108 DEFB4AO15263 64 aa13.65□□□□□ -0.22
LYSMD4-209ENST00000496108 IGKV4-1P06312 121 aa13.64□□□□□ -0.23
LYSMD4-209ENST00000496108 FN1P02751 2386 aaKnown RBP13.64□□□□□ -0.23
LYSMD4-209ENST00000496108 SETD2Q9BYW2 2564 aaPredicted RBP13.64□□□□□ -0.23
LYSMD4-209ENST00000496108 DEFB135Q30KP9 77 aa13.64□□□□□ -0.23
LYSMD4-209ENST00000496108 HIVEP2P31629 2446 aa13.63□□□□□ -0.23
LYSMD4-209ENST00000496108 KRTAP1-1Q07627 177 aa13.62□□□□□ -0.23
LYSMD4-209ENST00000496108 OCR1Q9BZK8 76 aa13.62□□□□□ -0.23
LYSMD4-209ENST00000496108 EGFEM1PQ0D2K5 195 aa13.62□□□□□ -0.23
LYSMD4-209ENST00000496108 A0A0U1RQV1 116 aa13.61□□□□□ -0.23
LYSMD4-209ENST00000496108 APOC4P55056 127 aa13.6□□□□□ -0.23
LYSMD4-209ENST00000496108 LINC00474Q9P2X8 69 aa13.6□□□□□ -0.23
LYSMD4-209ENST00000496108 PRYO14603 147 aa13.59□□□□□ -0.23
LYSMD4-209ENST00000496108 Q8NAQ8 132 aa13.59□□□□□ -0.23
LYSMD4-209ENST00000496108 CAMK2N2Q96S95 79 aa13.59□□□□□ -0.23
LYSMD4-209ENST00000496108 Q8N9L7 120 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms