RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 A0A087WZ39 114 aa9.3□□□□□ -0.92
TFE3-205ENST00000495940 CKS1BP61024 79 aa9.3□□□□□ -0.92
TFE3-205ENST00000495940 C6orf223Q8N319 242 aa9.3□□□□□ -0.92
TFE3-205ENST00000495940 LYRM9A8MSI8 78 aa9.29□□□□□ -0.92
TFE3-205ENST00000495940 H0YGX0 51 aa9.29□□□□□ -0.92
TFE3-205ENST00000495940 RPL28P46779 137 aaKnown RBP9.29□□□□□ -0.92
TFE3-205ENST00000495940 XGP55808 180 aa9.29□□□□□ -0.92
TFE3-205ENST00000495940 Q5VSD8 79 aa9.29□□□□□ -0.92
TFE3-205ENST00000495940 HTN3P15516 51 aa9.28□□□□□ -0.92
TFE3-205ENST00000495940 IGHV3OR16-9A0A0B4J2B5 98 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 NBDYA0A0U1RRE5 68 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 CRPP02741 224 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 GAGE2BQ13066 116 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 SS18Q15532 418 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 GAGE2EQ4V326 116 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 CHCHD5Q9BSY4 110 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 GAGE2DQ9UEU5 116 aa9.27□□□□□ -0.93
TFE3-205ENST00000495940 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
TFE3-205ENST00000495940 CXCL5P42830 114 aa9.26□□□□□ -0.93
TFE3-205ENST00000495940 IMUPQ9GZP8 106 aa9.26□□□□□ -0.93
TFE3-205ENST00000495940 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
TFE3-205ENST00000495940 GAGE6Q13070 117 aa9.24□□□□□ -0.93
TFE3-205ENST00000495940 SRRM2Q9UQ35 2752 aaKnown RBP9.24□□□□□ -0.93
TFE3-205ENST00000495940 HMCN2Q8NDA2 5059 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 TEX49A0A1B0GTD5 131 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 A0A1B0GX51 115 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 SPART-AS1P0CW21 52 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 NPC2P61916 151 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 COX17Q14061 63 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 Q8IZM0 81 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 DAND5Q8N907 189 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 CLEC2BQ92478 149 aa9.23□□□□□ -0.93
TFE3-205ENST00000495940 LINC00959A0A1B0GUT2 108 aa9.22□□□□□ -0.93
TFE3-205ENST00000495940 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
TFE3-205ENST00000495940 SOSTDC1Q6X4U4 206 aa9.22□□□□□ -0.93
TFE3-205ENST00000495940 SND1-IT1Q9HBX3 110 aa9.22□□□□□ -0.93
TFE3-205ENST00000495940 J3QL48 77 aa9.2□□□□□ -0.94
TFE3-205ENST00000495940 LINC00158P58513 81 aa9.2□□□□□ -0.94
TFE3-205ENST00000495940 TTC32Q5I0X7 151 aa9.2□□□□□ -0.94
TFE3-205ENST00000495940 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
TFE3-205ENST00000495940 KRTAP1-5Q9BYS1 174 aa9.2□□□□□ -0.94
TFE3-205ENST00000495940 TRBV7-7A0A0K0K1E9 115 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 NDUFC2O95298 119 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 DNAL4O96015 105 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 BAALC-AS2P0C853 105 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 GYPEP15421 78 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 C15orf53Q8NAA6 179 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 ANAPC13Q9BS18 74 aa9.19□□□□□ -0.94
TFE3-205ENST00000495940 IGLV4-60A0A075B6I1 120 aa9.18□□□□□ -0.94
TFE3-205ENST00000495940 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
TFE3-205ENST00000495940 PAX4O43316 350 aa9.17□□□□□ -0.94
TFE3-205ENST00000495940 ATP5G1P05496 136 aa9.17□□□□□ -0.94
TFE3-205ENST00000495940 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
TFE3-205ENST00000495940 LINC00643Q86TS7 51 aa9.17□□□□□ -0.94
TFE3-205ENST00000495940 TOMM7Q9P0U1 55 aa9.17□□□□□ -0.94
TFE3-205ENST00000495940 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
TFE3-205ENST00000495940 DEFB130BP0DP73 79 aa9.16□□□□□ -0.94
TFE3-205ENST00000495940 DEFB130AP0DP74 79 aa9.16□□□□□ -0.94
TFE3-205ENST00000495940 CCL18P55774 89 aa9.16□□□□□ -0.94
TFE3-205ENST00000495940 H3BQ85 93 aa9.15□□□□□ -0.94
TFE3-205ENST00000495940 MALP21145 153 aa9.15□□□□□ -0.94
TFE3-205ENST00000495940 NDUFV3P56181 108 aaKnown RBP9.15□□□□□ -0.94
TFE3-205ENST00000495940 SDIM1Q6ZPB5 146 aa9.15□□□□□ -0.94
TFE3-205ENST00000495940 LINC00588Q9Y4M8 146 aa9.15□□□□□ -0.94
TFE3-205ENST00000495940 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
TFE3-205ENST00000495940 HAMPP81172 84 aa9.14□□□□□ -0.95
TFE3-205ENST00000495940 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
TFE3-205ENST00000495940 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
TFE3-205ENST00000495940 DAD1P61803 113 aa9.13□□□□□ -0.95
TFE3-205ENST00000495940 CFAP161Q6P656 301 aa9.13□□□□□ -0.95
TFE3-205ENST00000495940 LINC00337Q8N6G1 96 aa9.13□□□□□ -0.95
TFE3-205ENST00000495940 C5orf38Q86SI9 138 aa9.12□□□□□ -0.95
TFE3-205ENST00000495940 SMIM11BQ8TCY0 68 aa9.12□□□□□ -0.95
TFE3-205ENST00000495940 OBSCN-AS1Q96MR7 158 aa9.11□□□□□ -0.95
TFE3-205ENST00000495940 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
TFE3-205ENST00000495940 KRTAP10-1P60331 282 aa9.1□□□□□ -0.95
TFE3-205ENST00000495940 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
TFE3-205ENST00000495940 JMJD7-PLA2G4BH0Y9G9 81 aa9.09□□□□□ -0.95
TFE3-205ENST00000495940 LELP1Q5T871 98 aa9.09□□□□□ -0.95
TFE3-205ENST00000495940 LINC00167Q96N53 147 aa9.09□□□□□ -0.95
TFE3-205ENST00000495940 H3BNG1 76 aa9.08□□□□□ -0.96
TFE3-205ENST00000495940 GHRHP01286 108 aa9.08□□□□□ -0.96
TFE3-205ENST00000495940 XCL1P47992 114 aa9.08□□□□□ -0.96
TFE3-205ENST00000495940 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
TFE3-205ENST00000495940 ORMDL1Q9P0S3 153 aa9.08□□□□□ -0.96
TFE3-205ENST00000495940 PFN2P35080 140 aa9.07□□□□□ -0.96
TFE3-205ENST00000495940 CHCHD10Q8WYQ3 142 aaPredicted RBP9.07□□□□□ -0.96
TFE3-205ENST00000495940 REG3AQ06141 175 aa9.06□□□□□ -0.96
TFE3-205ENST00000495940 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
TFE3-205ENST00000495940 Q6ZRN7 208 aaPredicted RBP9.06□□□□□ -0.96
TFE3-205ENST00000495940 OR13C6PQ8NH95 151 aa9.06□□□□□ -0.96
TFE3-205ENST00000495940 FAM218AQ96MZ4 157 aa9.06□□□□□ -0.96
TFE3-205ENST00000495940 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
TFE3-205ENST00000495940 GVQW2A0A096LPI5 108 aaPredicted RBP9.05□□□□□ -0.96
TFE3-205ENST00000495940 F8WDY8 70 aa9.05□□□□□ -0.96
TFE3-205ENST00000495940 FAM229AH3BQW9 127 aa9.05□□□□□ -0.96
TFE3-205ENST00000495940 TMEM256-PLSCR3K7ERE1 68 aa9.05□□□□□ -0.96
TFE3-205ENST00000495940 ANGP03950 147 aaKnown RBP9.04□□□□□ -0.96
TFE3-205ENST00000495940 DNAH10OSP0CZ25 163 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms