RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
RAPGEF3-214ENST00000495465 FAM19A1Q7Z5A9 133 aa8.61□□□□□ -1.03
RAPGEF3-214ENST00000495465 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
RAPGEF3-214ENST00000495465 CHCHD1Q96BP2 118 aaKnown RBP8.61□□□□□ -1.03
RAPGEF3-214ENST00000495465 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
RAPGEF3-214ENST00000495465 TMEM223A0PJW6 202 aa8.6□□□□□ -1.03
RAPGEF3-214ENST00000495465 TRAV12-1A0A0B4J245 112 aa8.59□□□□□ -1.03
RAPGEF3-214ENST00000495465 M0R378 163 aa8.59□□□□□ -1.03
RAPGEF3-214ENST00000495465 KRTAP13-2Q52LG2 175 aa8.59□□□□□ -1.03
RAPGEF3-214ENST00000495465 MUC2Q02817 5179 aa8.58□□□□□ -1.04
RAPGEF3-214ENST00000495465 FAM19A2Q8N3H0 131 aa8.58□□□□□ -1.04
RAPGEF3-214ENST00000495465 FAM229BQ4G0N7 80 aa8.57□□□□□ -1.04
RAPGEF3-214ENST00000495465 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
RAPGEF3-214ENST00000495465 ATP6V1G1O75348 118 aa8.56□□□□□ -1.04
RAPGEF3-214ENST00000495465 HSBP1O75506 76 aa8.56□□□□□ -1.04
RAPGEF3-214ENST00000495465 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
RAPGEF3-214ENST00000495465 IGKV2D-26A0A0A0MRZ7 120 aa8.55□□□□□ -1.04
RAPGEF3-214ENST00000495465 H0Y8G0 127 aa8.55□□□□□ -1.04
RAPGEF3-214ENST00000495465 MEIG1Q5JSS6 88 aa8.55□□□□□ -1.04
RAPGEF3-214ENST00000495465 LINC00304Q8N9R0 145 aa8.54□□□□□ -1.04
RAPGEF3-214ENST00000495465 PLEKHB2Q96CS7 222 aa8.54□□□□□ -1.04
RAPGEF3-214ENST00000495465 HIGD2AQ9BW72 106 aa8.54□□□□□ -1.04
RAPGEF3-214ENST00000495465 TRGC2P03986 189 aa8.53□□□□□ -1.04
RAPGEF3-214ENST00000495465 BOD1L2Q8IYS8 172 aa8.53□□□□□ -1.04
RAPGEF3-214ENST00000495465 NDUFA12Q9UI09 145 aa8.53□□□□□ -1.04
RAPGEF3-214ENST00000495465 MIR7-3HGQ8N6C7 128 aa8.52□□□□□ -1.05
RAPGEF3-214ENST00000495465 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
RAPGEF3-214ENST00000495465 NCR3O14931 201 aa8.51□□□□□ -1.05
RAPGEF3-214ENST00000495465 HERV-K104P63124 156 aa8.51□□□□□ -1.05
RAPGEF3-214ENST00000495465 SERF1AO75920 110 aa8.5□□□□□ -1.05
RAPGEF3-214ENST00000495465 LEPROTL1O95214 131 aa8.5□□□□□ -1.05
RAPGEF3-214ENST00000495465 C3orf22Q8N5N4 141 aa8.5□□□□□ -1.05
RAPGEF3-214ENST00000495465 MYMXA0A1B0GTQ4 84 aa8.49□□□□□ -1.05
RAPGEF3-214ENST00000495465 LINC00310P59036 64 aa8.49□□□□□ -1.05
RAPGEF3-214ENST00000495465 LINC00587B1AMM8 73 aa8.48□□□□□ -1.05
RAPGEF3-214ENST00000495465 FABP4P15090 132 aa8.48□□□□□ -1.05
RAPGEF3-214ENST00000495465 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
RAPGEF3-214ENST00000495465 PRYO14603 147 aa8.47□□□□□ -1.05
RAPGEF3-214ENST00000495465 LEPROTO15243 131 aa8.47□□□□□ -1.05
RAPGEF3-214ENST00000495465 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
RAPGEF3-214ENST00000495465 MAP1LC3CQ9BXW4 147 aa8.47□□□□□ -1.05
RAPGEF3-214ENST00000495465 SLC7A5P1Q8MH63 180 aa8.46□□□□□ -1.06
RAPGEF3-214ENST00000495465 DAND5Q8N907 189 aa8.46□□□□□ -1.06
RAPGEF3-214ENST00000495465 PMCHL2Q9BQD1 86 aa8.46□□□□□ -1.06
RAPGEF3-214ENST00000495465 KCNQ1DNQ9H478 68 aa8.46□□□□□ -1.06
RAPGEF3-214ENST00000495465 HSPB8Q9UJY1 196 aa8.46□□□□□ -1.06
RAPGEF3-214ENST00000495465 TRBV10-3A0A0K0K1G6 114 aa8.45□□□□□ -1.06
RAPGEF3-214ENST00000495465 ETDCA0A1B0GVM5 59 aa8.45□□□□□ -1.06
RAPGEF3-214ENST00000495465 PLNP26678 52 aa8.45□□□□□ -1.06
RAPGEF3-214ENST00000495465 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
RAPGEF3-214ENST00000495465 J3QQQ9 107 aa8.44□□□□□ -1.06
RAPGEF3-214ENST00000495465 DPM2O94777 84 aa8.44□□□□□ -1.06
RAPGEF3-214ENST00000495465 SMCR5Q8TEV8 140 aa8.44□□□□□ -1.06
RAPGEF3-214ENST00000495465 ZNF706Q9Y5V0 76 aaPredicted RBP8.44□□□□□ -1.06
RAPGEF3-214ENST00000495465 SPRR1AP35321 89 aa8.43□□□□□ -1.06
RAPGEF3-214ENST00000495465 HERVK_113P61574 105 aa8.43□□□□□ -1.06
RAPGEF3-214ENST00000495465 PPDPFQ9H3Y8 114 aa8.43□□□□□ -1.06
RAPGEF3-214ENST00000495465 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
RAPGEF3-214ENST00000495465 COLCA2A8K830 154 aa8.42□□□□□ -1.06
RAPGEF3-214ENST00000495465 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
RAPGEF3-214ENST00000495465 IGKCP01834 107 aa8.42□□□□□ -1.06
RAPGEF3-214ENST00000495465 MUC17Q685J3 4493 aa8.42□□□□□ -1.06
RAPGEF3-214ENST00000495465 LGALS3P17931 250 aaKnown RBP8.41□□□□□ -1.06
RAPGEF3-214ENST00000495465 S100A12P80511 92 aa8.41□□□□□ -1.06
RAPGEF3-214ENST00000495465 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
RAPGEF3-214ENST00000495465 DDTP30046 118 aa8.4□□□□□ -1.06
RAPGEF3-214ENST00000495465 CTAG1AP78358 180 aa8.4□□□□□ -1.06
RAPGEF3-214ENST00000495465 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
RAPGEF3-214ENST00000495465 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
RAPGEF3-214ENST00000495465 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
RAPGEF3-214ENST00000495465 CDIP1Q9H305 208 aa8.4□□□□□ -1.06
RAPGEF3-214ENST00000495465 B5MCH6 92 aa8.39□□□□□ -1.07
RAPGEF3-214ENST00000495465 NMUP48645 174 aa8.39□□□□□ -1.07
RAPGEF3-214ENST00000495465 MIEN1Q9BRT3 115 aa8.39□□□□□ -1.07
RAPGEF3-214ENST00000495465 TRBV10-2A0A0K0K1G8 114 aa8.38□□□□□ -1.07
RAPGEF3-214ENST00000495465 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
RAPGEF3-214ENST00000495465 GAGE2AQ6NT46 116 aa8.38□□□□□ -1.07
RAPGEF3-214ENST00000495465 Q8NBF4 154 aa8.38□□□□□ -1.07
RAPGEF3-214ENST00000495465 ERC2-IT1O76042 136 aa8.37□□□□□ -1.07
RAPGEF3-214ENST00000495465 NPC2P61916 151 aa8.37□□□□□ -1.07
RAPGEF3-214ENST00000495465 SPANXB1Q9NS25 103 aaPredicted RBP8.37□□□□□ -1.07
RAPGEF3-214ENST00000495465 FAT4Q6V0I7 4981 aa8.36□□□□□ -1.07
RAPGEF3-214ENST00000495465 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
RAPGEF3-214ENST00000495465 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
RAPGEF3-214ENST00000495465 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
RAPGEF3-214ENST00000495465 ADAMTSL4-AS1Q5T5F5 129 aa8.35□□□□□ -1.07
RAPGEF3-214ENST00000495465 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
RAPGEF3-214ENST00000495465 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
RAPGEF3-214ENST00000495465 NDUFC2O95298 119 aa8.34□□□□□ -1.07
RAPGEF3-214ENST00000495465 SOSTDC1Q6X4U4 206 aa8.34□□□□□ -1.07
RAPGEF3-214ENST00000495465 Q9BRP9 147 aa8.34□□□□□ -1.07
RAPGEF3-214ENST00000495465 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
RAPGEF3-214ENST00000495465 E9PLD3 99 aa8.33□□□□□ -1.08
RAPGEF3-214ENST00000495465 IGLV6-57P01721 117 aa8.33□□□□□ -1.08
RAPGEF3-214ENST00000495465 Q6ZRX8 168 aa8.33□□□□□ -1.08
RAPGEF3-214ENST00000495465 SYS1-DBNDD2H3BUS1 97 aa8.32□□□□□ -1.08
RAPGEF3-214ENST00000495465 MOBPQ13875 183 aa8.32□□□□□ -1.08
RAPGEF3-214ENST00000495465 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 HIST1H2BKO60814 126 aa8.31□□□□□ -1.08
RAPGEF3-214ENST00000495465 SPINK1P00995 79 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms