RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	RPL28	P46779	137 aa	Known RBP	6.15	□□□□□ -1.42
NEPRO-222	ENST00000494891	NKAPP1	Q8N9T2	125 aa		6.15	□□□□□ -1.42
NEPRO-222	ENST00000494891	SND1-IT1	Q9HBX3	110 aa		6.15	□□□□□ -1.42
NEPRO-222	ENST00000494891	PFN2	P35080	140 aa		6.14	□□□□□ -1.43
NEPRO-222	ENST00000494891	LINC00310	P59036	64 aa		6.14	□□□□□ -1.43
NEPRO-222	ENST00000494891	RPL24	P83731	157 aa	Known RBP	6.14	□□□□□ -1.43
NEPRO-222	ENST00000494891	RPL37AP8	A6NKH3	93 aa		6.13	□□□□□ -1.43
NEPRO-222	ENST00000494891	COLCA2	A8K830	154 aa		6.13	□□□□□ -1.43
NEPRO-222	ENST00000494891	LINC00587	B1AMM8	73 aa		6.12	□□□□□ -1.43
NEPRO-222	ENST00000494891	SERF1A	O75920	110 aa		6.12	□□□□□ -1.43
NEPRO-222	ENST00000494891	LEPROTL1	O95214	131 aa		6.12	□□□□□ -1.43
NEPRO-222	ENST00000494891	HERV-K104	P63124	156 aa		6.12	□□□□□ -1.43
NEPRO-222	ENST00000494891	SLC7A5P1	Q8MH63	180 aa		6.12	□□□□□ -1.43
NEPRO-222	ENST00000494891	FAM19A2	Q8N3H0	131 aa		6.12	□□□□□ -1.43
NEPRO-222	ENST00000494891	CDIP1	Q9H305	208 aa		6.11	□□□□□ -1.43
NEPRO-222	ENST00000494891	RNF213	Q63HN8	5207 aa		6.11	□□□□□ -1.43
NEPRO-222	ENST00000494891	GAGE10	A6NGK3	116 aa		6.1	□□□□□ -1.43
NEPRO-222	ENST00000494891	PLN	P26678	52 aa		6.1	□□□□□ -1.43
NEPRO-222	ENST00000494891		Q8NDZ9	215 aa		6.1	□□□□□ -1.43
NEPRO-222	ENST00000494891	TMEM126A	Q9H061	195 aa		6.1	□□□□□ -1.43
NEPRO-222	ENST00000494891	HSPB8	Q9UJY1	196 aa		6.1	□□□□□ -1.43
NEPRO-222	ENST00000494891	IGKV2-28	A0A075B6P5	120 aa		6.09	□□□□□ -1.43
NEPRO-222	ENST00000494891	LOC107984156	A0A0G2JMH3	177 aa		6.09	□□□□□ -1.43
NEPRO-222	ENST00000494891	SCGB1D1	O95968	90 aa		6.09	□□□□□ -1.43
NEPRO-222	ENST00000494891	IGKV2D-28	P01615	120 aa		6.09	□□□□□ -1.43
NEPRO-222	ENST00000494891	LINC00158	P58513	81 aa		6.09	□□□□□ -1.43
NEPRO-222	ENST00000494891	FAM229B	Q4G0N7	80 aa		6.09	□□□□□ -1.43
NEPRO-222	ENST00000494891	ARL17A	Q8IVW1	177 aa		6.09	□□□□□ -1.43
NEPRO-222	ENST00000494891		A0A087X002	238 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	IGKV2D-26	A0A0A0MRZ7	120 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	MYMX	A0A1B0GTQ4	84 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891		M0R378	163 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	SCO1	O75880	301 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	CRYGA	P11844	174 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	UBE2A	P49459	152 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	CTAG1A	P78358	180 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	NDUFA12	Q9UI09	145 aa		6.08	□□□□□ -1.44
NEPRO-222	ENST00000494891	LEPROT	O15243	131 aa		6.07	□□□□□ -1.44
NEPRO-222	ENST00000494891	SMIM13	P0DJ93	91 aa		6.07	□□□□□ -1.44
NEPRO-222	ENST00000494891	PLEKHB2	Q96CS7	222 aa		6.07	□□□□□ -1.44
NEPRO-222	ENST00000494891	MAP1LC3C	Q9BXW4	147 aa		6.07	□□□□□ -1.44
NEPRO-222	ENST00000494891	DPM2	O94777	84 aa		6.06	□□□□□ -1.44
NEPRO-222	ENST00000494891	NMU	P48645	174 aa		6.06	□□□□□ -1.44
NEPRO-222	ENST00000494891	MIR7-3HG	Q8N6C7	128 aa		6.06	□□□□□ -1.44
NEPRO-222	ENST00000494891	TMEM238	C9JI98	176 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891		J3QQQ9	107 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	ATP6V1G1	O75348	118 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	IGKC	P01834	107 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	LOR	P23490	312 aa	Predicted RBP	6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	SPRR1A	P35321	89 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	TSPEAR-AS2	P59090	65 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	MEIG1	Q5JSS6	88 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	KCNQ1DN	Q9H478	68 aa		6.05	□□□□□ -1.44
NEPRO-222	ENST00000494891	PRY	O14603	147 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BK	O60814	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BJ	P06899	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	FABP4	P15090	132 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BO	P23527	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BB	P33778	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BD	P58876	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HERVK_113	P61574	105 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BC	P62807	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST2H2BE	Q16778	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	KRTAP13-2	Q52LG2	175 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	FAM19A1	Q7Z5A9	133 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	BOD1L2	Q8IYS8	172 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	LINC00337	Q8N6G1	96 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	TYMSOS	Q8TAI1	123 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BH	Q93079	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BN	Q99877	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	HIST1H2BM	Q99879	126 aa		6.04	□□□□□ -1.44
NEPRO-222	ENST00000494891	TRBV10-2	A0A0K0K1G8	114 aa		6.03	□□□□□ -1.44
NEPRO-222	ENST00000494891		A0A0U1RRA0	63 aa		6.03	□□□□□ -1.44
NEPRO-222	ENST00000494891	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.03	□□□□□ -1.44
NEPRO-222	ENST00000494891		H0Y8G0	127 aa		6.03	□□□□□ -1.44
NEPRO-222	ENST00000494891	PRLH	P81277	87 aa		6.03	□□□□□ -1.44
NEPRO-222	ENST00000494891		E9PLD3	99 aa		6.02	□□□□□ -1.45
NEPRO-222	ENST00000494891	NDUFC2	O95298	119 aa		6.02	□□□□□ -1.45
NEPRO-222	ENST00000494891	LPA	P08519	4548 aa		6.01	□□□□□ -1.45
NEPRO-222	ENST00000494891	SYS1-DBNDD2	H3BUS1	97 aa		6.01	□□□□□ -1.45
NEPRO-222	ENST00000494891	COA6	Q5JTJ3	125 aa	Known RBP	6.01	□□□□□ -1.45
NEPRO-222	ENST00000494891	LGALS3	P17931	250 aa	Known RBP	6	□□□□□ -1.45
NEPRO-222	ENST00000494891	LINC01545	Q5VT33	79 aa		6	□□□□□ -1.45
NEPRO-222	ENST00000494891	PMCHL2	Q9BQD1	86 aa		6	□□□□□ -1.45
NEPRO-222	ENST00000494891	ANAPC11	Q9NYG5	84 aa		6	□□□□□ -1.45
NEPRO-222	ENST00000494891	TRBV10-3	A0A0K0K1G6	114 aa		5.99	□□□□□ -1.45
NEPRO-222	ENST00000494891	PET117	Q6UWS5	81 aa		5.99	□□□□□ -1.45
NEPRO-222	ENST00000494891	SPRR4	Q96PI1	79 aa		5.99	□□□□□ -1.45
NEPRO-222	ENST00000494891	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.99	□□□□□ -1.45
NEPRO-222	ENST00000494891	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.99	□□□□□ -1.45
NEPRO-222	ENST00000494891	NCR3	O14931	201 aa		5.98	□□□□□ -1.45
NEPRO-222	ENST00000494891	IGLV6-57	P01721	117 aa		5.98	□□□□□ -1.45
NEPRO-222	ENST00000494891	S100A12	P80511	92 aa		5.98	□□□□□ -1.45
NEPRO-222	ENST00000494891	LINC00304	Q8N9R0	145 aa		5.98	□□□□□ -1.45
NEPRO-222	ENST00000494891	HIGD2A	Q9BW72	106 aa		5.98	□□□□□ -1.45
NEPRO-222	ENST00000494891		A0A0J9YXY3	114 aa		5.97	□□□□□ -1.45
NEPRO-222	ENST00000494891	TIMM17B	O60830	172 aa		5.97	□□□□□ -1.45
NEPRO-222	ENST00000494891	DAND5	Q8N907	189 aa		5.97	□□□□□ -1.45
NEPRO-222	ENST00000494891	MIEN1	Q9BRT3	115 aa		5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms