RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 Q9HAA7 133 aa12.59□□□□□ -0.39
TSPAN4-212ENST00000494815 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
TSPAN4-212ENST00000494815 CRYGAP11844 174 aa12.59□□□□□ -0.39
TSPAN4-212ENST00000494815 LINC00337Q8N6G1 96 aa12.59□□□□□ -0.39
TSPAN4-212ENST00000494815 CHCHD10Q8WYQ3 142 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-212ENST00000494815 COX7CP15954 63 aa12.58□□□□□ -0.4
TSPAN4-212ENST00000494815 GAGE2AQ6NT46 116 aa12.58□□□□□ -0.4
TSPAN4-212ENST00000494815 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
TSPAN4-212ENST00000494815 IGKV2-28A0A075B6P5 120 aa12.57□□□□□ -0.4
TSPAN4-212ENST00000494815 IGKV2D-28P01615 120 aa12.57□□□□□ -0.4
TSPAN4-212ENST00000494815 SND1-IT1Q9HBX3 110 aa12.57□□□□□ -0.4
TSPAN4-212ENST00000494815 ESRGQ1W209 222 aa12.56□□□□□ -0.4
TSPAN4-212ENST00000494815 C2orf48Q96LS8 159 aa12.56□□□□□ -0.4
TSPAN4-212ENST00000494815 TOMM7Q9P0U1 55 aa12.56□□□□□ -0.4
TSPAN4-212ENST00000494815 WFDC10BQ8IUB3 73 aa12.55□□□□□ -0.4
TSPAN4-212ENST00000494815 KLK12Q9UKR0 248 aa12.55□□□□□ -0.4
TSPAN4-212ENST00000494815 DNAL4O96015 105 aa12.54□□□□□ -0.4
TSPAN4-212ENST00000494815 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
TSPAN4-212ENST00000494815 B9D2Q9BPU9 175 aa12.54□□□□□ -0.4
TSPAN4-212ENST00000494815 IGLV10-54A0A075B6I4 117 aa12.53□□□□□ -0.4
TSPAN4-212ENST00000494815 A0A087WYN8 130 aa12.53□□□□□ -0.4
TSPAN4-212ENST00000494815 DNHD1Q96M86 4753 aa12.53□□□□□ -0.4
TSPAN4-212ENST00000494815 Q8IZM0 81 aa12.53□□□□□ -0.4
TSPAN4-212ENST00000494815 H0YGX0 51 aa12.52□□□□□ -0.4
TSPAN4-212ENST00000494815 OXTP01178 125 aa12.52□□□□□ -0.4
TSPAN4-212ENST00000494815 ENHOQ6UWT2 76 aa12.52□□□□□ -0.4
TSPAN4-212ENST00000494815 LINC00158P58513 81 aa12.52□□□□□ -0.41
TSPAN4-212ENST00000494815 C4orf26Q17RF5 130 aa12.52□□□□□ -0.41
TSPAN4-212ENST00000494815 DPH3Q96FX2 82 aa12.52□□□□□ -0.41
TSPAN4-212ENST00000494815 CYSTM1Q9H1C7 97 aa12.52□□□□□ -0.41
TSPAN4-212ENST00000494815 CCL18P55774 89 aa12.51□□□□□ -0.41
TSPAN4-212ENST00000494815 HIST1H4AP62805 103 aaKnown RBP12.51□□□□□ -0.41
TSPAN4-212ENST00000494815 C6orf226Q5I0X4 101 aa12.5□□□□□ -0.41
TSPAN4-212ENST00000494815 Q5XG85 94 aa12.5□□□□□ -0.41
TSPAN4-212ENST00000494815 OBSCN-AS1Q96MR7 158 aa12.5□□□□□ -0.41
TSPAN4-212ENST00000494815 hADV29S1A0JD25 119 aa12.49□□□□□ -0.41
TSPAN4-212ENST00000494815 IBA57-AS1B1ANH7 110 aa12.49□□□□□ -0.41
TSPAN4-212ENST00000494815 LINC01556Q5JQF7 62 aa12.49□□□□□ -0.41
TSPAN4-212ENST00000494815 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
TSPAN4-212ENST00000494815 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-212ENST00000494815 HRCT1Q6UXD1 115 aa12.49□□□□□ -0.41
TSPAN4-212ENST00000494815 C14orf132Q9NPU4 83 aa12.48□□□□□ -0.41
TSPAN4-212ENST00000494815 ATOX1O00244 68 aa12.47□□□□□ -0.41
TSPAN4-212ENST00000494815 TMEM258P61165 79 aa12.47□□□□□ -0.41
TSPAN4-212ENST00000494815 STAB2Q8WWQ8 2551 aa12.46□□□□□ -0.41
TSPAN4-212ENST00000494815 KIAA0087Q14695 138 aa12.46□□□□□ -0.42
TSPAN4-212ENST00000494815 LECT2O14960 151 aa12.45□□□□□ -0.42
TSPAN4-212ENST00000494815 Q6JHZ5 121 aa12.45□□□□□ -0.42
TSPAN4-212ENST00000494815 DNAH10OSP0CZ25 163 aa12.45□□□□□ -0.42
TSPAN4-212ENST00000494815 PFN2P35080 140 aa12.43□□□□□ -0.42
TSPAN4-212ENST00000494815 RPL18AQ02543 176 aaKnown RBP12.42□□□□□ -0.42
TSPAN4-212ENST00000494815 DSCR8Q96T75 97 aa12.42□□□□□ -0.42
TSPAN4-212ENST00000494815 LINC00846Q9NV44 126 aa12.42□□□□□ -0.42
TSPAN4-212ENST00000494815 LINC00588Q9Y4M8 146 aa12.42□□□□□ -0.42
TSPAN4-212ENST00000494815 COL7A1Q02388 2944 aa12.41□□□□□ -0.42
TSPAN4-212ENST00000494815 IGKV3D-7A0A0C4DH55 119 aa12.4□□□□□ -0.42
TSPAN4-212ENST00000494815 NCR3O14931 201 aa12.4□□□□□ -0.42
TSPAN4-212ENST00000494815 SPAG11BQ08648 103 aa12.39□□□□□ -0.43
TSPAN4-212ENST00000494815 KRTAP26-1Q6PEX3 210 aa12.39□□□□□ -0.43
TSPAN4-212ENST00000494815 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
TSPAN4-212ENST00000494815 ORMDL1Q9P0S3 153 aa12.39□□□□□ -0.43
TSPAN4-212ENST00000494815 F8WDY8 70 aa12.38□□□□□ -0.43
TSPAN4-212ENST00000494815 COX17Q14061 63 aa12.38□□□□□ -0.43
TSPAN4-212ENST00000494815 SLPIP03973 132 aa12.37□□□□□ -0.43
TSPAN4-212ENST00000494815 C1orf43Q9BWL3 253 aa12.37□□□□□ -0.43
TSPAN4-212ENST00000494815 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
TSPAN4-212ENST00000494815 CCKP06307 115 aa12.34□□□□□ -0.43
TSPAN4-212ENST00000494815 SERP2Q8N6R1 65 aa12.33□□□□□ -0.44
TSPAN4-212ENST00000494815 A0A087WVE0 104 aa12.33□□□□□ -0.44
TSPAN4-212ENST00000494815 IGKV2D-24A0A075B6R9 120 aa12.32□□□□□ -0.44
TSPAN4-212ENST00000494815 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
TSPAN4-212ENST00000494815 PRO0628Q9UI54 55 aa12.32□□□□□ -0.44
TSPAN4-212ENST00000494815 C6orf223Q8N319 242 aa12.32□□□□□ -0.44
TSPAN4-212ENST00000494815 GVQW2A0A096LPI5 108 aaPredicted RBP12.31□□□□□ -0.44
TSPAN4-212ENST00000494815 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
TSPAN4-212ENST00000494815 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
TSPAN4-212ENST00000494815 JMJD7-PLA2G4BH0Y9G9 81 aa12.3□□□□□ -0.44
TSPAN4-212ENST00000494815 C10orf25Q5T742 122 aa12.3□□□□□ -0.44
TSPAN4-212ENST00000494815 ZNF561-AS1K7EIQ3 104 aa12.29□□□□□ -0.44
TSPAN4-212ENST00000494815 S100A7L2Q5SY68 101 aa12.29□□□□□ -0.44
TSPAN4-212ENST00000494815 Q8N814 137 aa12.29□□□□□ -0.44
TSPAN4-212ENST00000494815 C15orf56Q8N910 161 aa12.29□□□□□ -0.44
TSPAN4-212ENST00000494815 APLNQ9ULZ1 77 aa12.29□□□□□ -0.44
TSPAN4-212ENST00000494815 C9orf116Q5BN46 136 aaPredicted RBP12.28□□□□□ -0.44
TSPAN4-212ENST00000494815 NDUFC2O95298 119 aa12.28□□□□□ -0.44
TSPAN4-212ENST00000494815 PRKDCP78527 4128 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-212ENST00000494815 TMEM256-PLSCR3K7ERE1 68 aa12.27□□□□□ -0.45
TSPAN4-212ENST00000494815 RMI2Q96E14 147 aa12.27□□□□□ -0.45
TSPAN4-212ENST00000494815 NUPR2A6NF83 97 aa12.26□□□□□ -0.45
TSPAN4-212ENST00000494815 ATP5EP2Q5VTU8 51 aa12.26□□□□□ -0.45
TSPAN4-212ENST00000494815 DYNC2H1Q8NCM8 4307 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-212ENST00000494815 HIGD2BQ4VC39 106 aa12.26□□□□□ -0.45
TSPAN4-212ENST00000494815 LINC00336Q6ZUF6 198 aa12.25□□□□□ -0.45
TSPAN4-212ENST00000494815 CAMK2N2Q96S95 79 aa12.25□□□□□ -0.45
TSPAN4-212ENST00000494815 C6orf48Q9UBA6 75 aa12.25□□□□□ -0.45
TSPAN4-212ENST00000494815 MEGF8Q7Z7M0 2845 aa12.24□□□□□ -0.45
TSPAN4-212ENST00000494815 PRR3P79522 188 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-212ENST00000494815 UBE2DNLQ8IWF7 75 aa12.22□□□□□ -0.45
TSPAN4-212ENST00000494815 DNAH1Q9P2D7 4330 aa12.21□□□□□ -0.46
TSPAN4-212ENST00000494815 EPM2AB3EWF7 344 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 565.1 ms