RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
SKA1-205ENST00000494518 TMEM126AQ9H061 195 aa7.3□□□□□ -1.24
SKA1-205ENST00000494518 FA2HQ7L5A8 372 aa7.29□□□□□ -1.24
SKA1-205ENST00000494518 Q8NDZ9 215 aa7.29□□□□□ -1.24
SKA1-205ENST00000494518 SND1-IT1Q9HBX3 110 aa7.29□□□□□ -1.24
SKA1-205ENST00000494518 SMCO4Q9NRQ5 59 aa7.29□□□□□ -1.24
SKA1-205ENST00000494518 LINC01546A6NGU7 62 aa7.28□□□□□ -1.24
SKA1-205ENST00000494518 ERG28Q9UKR5 140 aa7.28□□□□□ -1.24
SKA1-205ENST00000494518 IGLV5-39A0A0G2JS06 123 aa7.27□□□□□ -1.25
SKA1-205ENST00000494518 M0R378 163 aa7.27□□□□□ -1.25
SKA1-205ENST00000494518 IGLC3P0DOY3 106 aa7.27□□□□□ -1.25
SKA1-205ENST00000494518 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
SKA1-205ENST00000494518 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
SKA1-205ENST00000494518 FABP9Q0Z7S8 132 aa7.26□□□□□ -1.25
SKA1-205ENST00000494518 CBLN2Q8IUK8 224 aa7.26□□□□□ -1.25
SKA1-205ENST00000494518 HIGD2AQ9BW72 106 aa7.26□□□□□ -1.25
SKA1-205ENST00000494518 GNB1LQ9BYB4 327 aa7.26□□□□□ -1.25
SKA1-205ENST00000494518 TRAV9-1A0A075B6T8 112 aa7.25□□□□□ -1.25
SKA1-205ENST00000494518 LINC01549A6NIU2 74 aa7.25□□□□□ -1.25
SKA1-205ENST00000494518 S100PP25815 95 aa7.25□□□□□ -1.25
SKA1-205ENST00000494518 RPL24P83731 157 aaKnown RBP7.25□□□□□ -1.25
SKA1-205ENST00000494518 PLEKHB2Q96CS7 222 aa7.25□□□□□ -1.25
SKA1-205ENST00000494518 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
SKA1-205ENST00000494518 A0A096LNJ9 63 aa7.24□□□□□ -1.25
SKA1-205ENST00000494518 PMCHL1Q16048 86 aa7.24□□□□□ -1.25
SKA1-205ENST00000494518 CLLU1Q5K131 121 aa7.24□□□□□ -1.25
SKA1-205ENST00000494518 LCE4AQ5TA78 99 aa7.24□□□□□ -1.25
SKA1-205ENST00000494518 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
SKA1-205ENST00000494518 TMEM218A2RU14 115 aa7.23□□□□□ -1.25
SKA1-205ENST00000494518 C11orf86A6NJI1 115 aa7.22□□□□□ -1.25
SKA1-205ENST00000494518 KRTAP19-4Q3LI73 84 aa7.22□□□□□ -1.25
SKA1-205ENST00000494518 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
SKA1-205ENST00000494518 TMEM170BQ5T4T1 132 aa7.22□□□□□ -1.25
SKA1-205ENST00000494518 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
SKA1-205ENST00000494518 COX17Q14061 63 aa7.21□□□□□ -1.26
SKA1-205ENST00000494518 DAND5Q8N907 189 aa7.21□□□□□ -1.26
SKA1-205ENST00000494518 SPRR4Q96PI1 79 aa7.21□□□□□ -1.26
SKA1-205ENST00000494518 LINC00158P58513 81 aa7.2□□□□□ -1.26
SKA1-205ENST00000494518 BAGE3Q86Y29 109 aa7.2□□□□□ -1.26
SKA1-205ENST00000494518 HBDP02042 147 aa7.19□□□□□ -1.26
SKA1-205ENST00000494518 UQCC3Q6UW78 93 aa7.19□□□□□ -1.26
SKA1-205ENST00000494518 C18orf32Q8TCD1 76 aa7.19□□□□□ -1.26
SKA1-205ENST00000494518 NCR3O14931 201 aa7.18□□□□□ -1.26
SKA1-205ENST00000494518 LINC00614P0C842 121 aa7.18□□□□□ -1.26
SKA1-205ENST00000494518 COX19Q49B96 90 aa7.18□□□□□ -1.26
SKA1-205ENST00000494518 Q8NBF4 154 aa7.18□□□□□ -1.26
SKA1-205ENST00000494518 SEC11CQ9BY50 192 aa7.18□□□□□ -1.26
SKA1-205ENST00000494518 SPAG11AQ6PDA7 123 aa7.17□□□□□ -1.26
SKA1-205ENST00000494518 RPS10P5Q9NQ39 176 aa7.17□□□□□ -1.26
SKA1-205ENST00000494518 SMIM13P0DJ93 91 aa7.16□□□□□ -1.26
SKA1-205ENST00000494518 LINC00337Q8N6G1 96 aa7.16□□□□□ -1.26
SKA1-205ENST00000494518 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
SKA1-205ENST00000494518 CTAG1AP78358 180 aa7.15□□□□□ -1.26
SKA1-205ENST00000494518 IFITM2Q01629 132 aa7.15□□□□□ -1.26
SKA1-205ENST00000494518 COMMD7Q86VX2 200 aa7.15□□□□□ -1.26
SKA1-205ENST00000494518 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
SKA1-205ENST00000494518 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.26
SKA1-205ENST00000494518 CHTOPQ9Y3Y2 248 aaKnown RBP7.15□□□□□ -1.26
SKA1-205ENST00000494518 ZNF706Q9Y5V0 76 aaPredicted RBP7.15□□□□□ -1.26
SKA1-205ENST00000494518 PRYO14603 147 aa7.14□□□□□ -1.27
SKA1-205ENST00000494518 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
SKA1-205ENST00000494518 MEIG1Q5JSS6 88 aa7.14□□□□□ -1.27
SKA1-205ENST00000494518 SFTA2Q6UW10 78 aa7.14□□□□□ -1.27
SKA1-205ENST00000494518 FP248Q71RG6 208 aaPredicted RBP7.14□□□□□ -1.27
SKA1-205ENST00000494518 ETDCA0A1B0GVM5 59 aa7.13□□□□□ -1.27
SKA1-205ENST00000494518 TMEM223A0PJW6 202 aa7.13□□□□□ -1.27
SKA1-205ENST00000494518 ATP6V1G1O75348 118 aa7.13□□□□□ -1.27
SKA1-205ENST00000494518 RHEBQ15382 184 aa7.12□□□□□ -1.27
SKA1-205ENST00000494518 MIR7-3HGQ8N6C7 128 aa7.12□□□□□ -1.27
SKA1-205ENST00000494518 KRTAP4-1Q9BYQ7 146 aa7.12□□□□□ -1.27
SKA1-205ENST00000494518 TRBV10-3A0A0K0K1G6 114 aa7.11□□□□□ -1.27
SKA1-205ENST00000494518 GAGE2AQ6NT46 116 aa7.11□□□□□ -1.27
SKA1-205ENST00000494518 IGLV9-49A0A0B4J1Y8 123 aa7.1□□□□□ -1.27
SKA1-205ENST00000494518 KRTAP4-16G5E9R7 235 aaPredicted RBP7.1□□□□□ -1.27
SKA1-205ENST00000494518 SPRR1AP35321 89 aa7.1□□□□□ -1.27
SKA1-205ENST00000494518 LINC00310P59036 64 aa7.1□□□□□ -1.27
SKA1-205ENST00000494518 MOBPQ13875 183 aa7.1□□□□□ -1.27
SKA1-205ENST00000494518 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
SKA1-205ENST00000494518 C10orf91Q5T1B1 145 aa7.1□□□□□ -1.27
SKA1-205ENST00000494518 ERC2-IT1O76042 136 aa7.09□□□□□ -1.27
SKA1-205ENST00000494518 KCNQ1DNQ9H478 68 aa7.09□□□□□ -1.27
SKA1-205ENST00000494518 SPINK1P00995 79 aa7.08□□□□□ -1.28
SKA1-205ENST00000494518 LINC01547P58512 204 aaPredicted RBP7.08□□□□□ -1.28
SKA1-205ENST00000494518 IFI27L1Q96BM0 104 aa7.08□□□□□ -1.28
SKA1-205ENST00000494518 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
SKA1-205ENST00000494518 H0Y8G0 127 aa7.07□□□□□ -1.28
SKA1-205ENST00000494518 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
SKA1-205ENST00000494518 NDUFA12Q9UI09 145 aa7.07□□□□□ -1.28
SKA1-205ENST00000494518 B5MCH6 92 aa7.06□□□□□ -1.28
SKA1-205ENST00000494518 TSPEAR-AS2P59090 65 aa7.05□□□□□ -1.28
SKA1-205ENST00000494518 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
SKA1-205ENST00000494518 HERV-K104P63124 156 aa7.05□□□□□ -1.28
SKA1-205ENST00000494518 Q8N377 158 aa7.05□□□□□ -1.28
SKA1-205ENST00000494518 FAM19A2Q8N3H0 131 aa7.05□□□□□ -1.28
SKA1-205ENST00000494518 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
SKA1-205ENST00000494518 APOC3P02656 99 aa7.04□□□□□ -1.28
SKA1-205ENST00000494518 DDTP30046 118 aa7.04□□□□□ -1.28
SKA1-205ENST00000494518 Q9BRP9 147 aa7.04□□□□□ -1.28
SKA1-205ENST00000494518 S100A12P80511 92 aa7.03□□□□□ -1.28
SKA1-205ENST00000494518 CHCHD1Q96BP2 118 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms