RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MAST1Q9Y2H9 1570 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 SLIT1O75093 1534 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 EHBP1L1Q8N3D4 1523 aa0.74□□□□□ -2.29
LMNB1-207ENST00000494185 AFDNP55196 1824 aaKnown RBP0.73□□□□□ -2.29
LMNB1-207ENST00000494185 ARFGEF1Q9Y6D6 1849 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 MED13LQ71F56 2210 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 DLEC1Q9Y238 1755 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 ZNF831Q5JPB2 1677 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 TRGV1A0A0A0MS02 117 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 UQCR11O14957 56 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 FXYD3Q14802 87 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 C10orf99Q6UWK7 81 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 Q6ZQY7 126 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 C5orf56Q8N8D9 126 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 NESP48681 1621 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 UBR3Q6ZT12 1888 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 LOC285556D6RIA3 1793 aa0.73□□□□□ -2.29
LMNB1-207ENST00000494185 TJP1Q07157 1748 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 ABCA1O95477 2261 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 FBN3Q75N90 2809 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 TNCP24821 2201 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.72□□□□□ -2.29
LMNB1-207ENST00000494185 CTXND1A0A1B0GTU2 59 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 H0Y9P7 68 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 M0R1W7 72 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 PIN1P1O15428 100 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 CRIP1P50238 77 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 KRTAP10-4P60372 401 aaPredicted RBP0.72□□□□□ -2.29
LMNB1-207ENST00000494185 TRPM2O94759 1503 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 CDC42BPAQ5VT25 1732 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 FMN2Q9NZ56 1722 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 F5P12259 2224 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 E9PCH4 1651 aa0.72□□□□□ -2.29
LMNB1-207ENST00000494185 LRRC37A3O60309 1634 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 NHSL1Q5SYE7 1610 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 CICQ96RK0 1608 aaPredicted RBP0.71□□□□□ -2.3
LMNB1-207ENST00000494185 ASXL3Q9C0F0 2248 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 MGPP08493 103 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 GAFA1Q96PS6 74 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 CCL19Q99731 98 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 POLR1AO95602 1720 aaPredicted RBP0.71□□□□□ -2.3
LMNB1-207ENST00000494185 NUP188Q5SRE5 1749 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 SCN7AQ01118 1682 aa0.71□□□□□ -2.3
LMNB1-207ENST00000494185 KNTC1P50748 2209 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 GOLGA4Q13439 2230 aaKnown RBP0.7□□□□□ -2.3
LMNB1-207ENST00000494185 NDUFA4O00483 81 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 NDUFB1O75438 58 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 NDUFA3O95167 84 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 PLNP26678 52 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 FXYD6P3P58550 94 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 DEFB112Q30KQ8 113 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 UBL5Q9BZL1 73 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 TIMM8BQ9Y5J9 83 aaPredicted RBP0.7□□□□□ -2.3
LMNB1-207ENST00000494185 KIF21BO75037 1637 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 ZDBF2Q9HCK1 2354 aa0.7□□□□□ -2.3
LMNB1-207ENST00000494185 FCGBPQ9Y6R7 5405 aaPredicted RBP0.7□□□□□ -2.3
LMNB1-207ENST00000494185 DOT1LQ8TEK3 1739 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 SHPRHQ149N8 1683 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 NHSQ6T4R5 1651 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 CFAP43Q8NDM7 1665 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 LAMA4Q16363 1823 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 ADCY10Q96PN6 1610 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 G3V318 75 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 HAMPP81172 84 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 KCNQ1DNQ9H478 68 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 AHCTF1Q8WYP5 2266 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 SAMD9Q5K651 1589 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 ERCC6L2Q5T890 1561 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 CADP27708 2225 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 RICTORQ6R327 1708 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 NAV3Q8IVL0 2385 aa0.69□□□□□ -2.3
LMNB1-207ENST00000494185 ANKRD36CQ5JPF3 1778 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 A0A096LNT2 108 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 A0A1B0GU69 56 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 ETDCA0A1B0GVM5 59 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 CPSF4LA6NMK7 179 aaKnown RBP0.68□□□□□ -2.3
LMNB1-207ENST00000494185 LOC730098B7Z3J9 87 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 K7EIL1 84 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 COX7BP24311 80 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 DEFB114Q30KQ6 69 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 PKD1L3Q7Z443 1732 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 CRIPTQ9P021 101 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 COL6A6A6NMZ7 2263 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 TULP4Q9NRJ4 1543 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 COL14A1Q05707 1796 aaKnown RBP0.68□□□□□ -2.3
LMNB1-207ENST00000494185 PAPPA2Q9BXP8 1791 aa0.68□□□□□ -2.3
LMNB1-207ENST00000494185 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
LMNB1-207ENST00000494185 CLTCL1P53675 1640 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 EIF2AK4Q9P2K8 1649 aaKnown RBP0.67□□□□□ -2.3
LMNB1-207ENST00000494185 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.67□□□□□ -2.3
LMNB1-207ENST00000494185 ABCC8Q09428 1581 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 CACNA1CQ13936 2221 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 GVQW2A0A096LPI5 108 aaPredicted RBP0.67□□□□□ -2.3
LMNB1-207ENST00000494185 H0YGX0 51 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 ACYP2P14621 99 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 TFF3Q07654 80 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 SPINK13Q1W4C9 94 aa0.67□□□□□ -2.3
LMNB1-207ENST00000494185 Q6ZRX8 168 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms