RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CNFNQ9BYD5 112 aa8.08□□□□□ -1.12
BRCA1-222ENST00000493919 C16orf90A8MZG2 172 aa8.07□□□□□ -1.12
BRCA1-222ENST00000493919 C22orf24Q9Y442 160 aa8.07□□□□□ -1.12
BRCA1-222ENST00000493919 SPANXN1Q5VSR9 72 aa8.07□□□□□ -1.12
BRCA1-222ENST00000493919 GNRH2O43555 120 aa8.06□□□□□ -1.12
BRCA1-222ENST00000493919 PDE6HQ13956 83 aa8.06□□□□□ -1.12
BRCA1-222ENST00000493919 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
BRCA1-222ENST00000493919 PRAC2D3DTV9 90 aa8.04□□□□□ -1.12
BRCA1-222ENST00000493919 IGLV2-11P01706 119 aa8.04□□□□□ -1.12
BRCA1-222ENST00000493919 PRM2P04554 102 aa8.04□□□□□ -1.12
BRCA1-222ENST00000493919 TSPEAR-AS2P59090 65 aa8.04□□□□□ -1.12
BRCA1-222ENST00000493919 PRR3P79522 188 aaKnown RBP8.04□□□□□ -1.12
BRCA1-222ENST00000493919 Q9HAA7 133 aa8.04□□□□□ -1.12
BRCA1-222ENST00000493919 PRYO14603 147 aa8.03□□□□□ -1.12
BRCA1-222ENST00000493919 GIG44P09565 113 aaPredicted RBP8.03□□□□□ -1.12
BRCA1-222ENST00000493919 C6orf99Q4VX62 202 aa8.03□□□□□ -1.12
BRCA1-222ENST00000493919 TMEM254Q8TBM7 123 aa8.03□□□□□ -1.12
BRCA1-222ENST00000493919 SPINK13Q1W4C9 94 aa8.03□□□□□ -1.12
BRCA1-222ENST00000493919 DNAH7Q8WXX0 4024 aa8.02□□□□□ -1.13
BRCA1-222ENST00000493919 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
BRCA1-222ENST00000493919 IGHV3OR16-12A0A075B7B8 117 aa8.02□□□□□ -1.13
BRCA1-222ENST00000493919 IGKV2-40A0A087WW87 121 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-222ENST00000493919 HCG22E2RYF7 251 aa8.02□□□□□ -1.13
BRCA1-222ENST00000493919 PSPHP1O15172 72 aa8.02□□□□□ -1.13
BRCA1-222ENST00000493919 IGKV2D-40P01614 121 aaPredicted RBP8.02□□□□□ -1.13
BRCA1-222ENST00000493919 A0A0J9YXY3 114 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 GYPEP15421 78 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 MIAQ16674 131 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 ASB16-AS1Q495Z4 193 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 ENHOQ6UWT2 76 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 SPTSSBQ8NFR3 76 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 Q5VV11 94 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 SMIM2Q9BVW6 85 aa8.01□□□□□ -1.13
BRCA1-222ENST00000493919 LYPD1Q8N2G4 141 aa8□□□□□ -1.13
BRCA1-222ENST00000493919 WWC2-AS2Q96NR7 200 aa8□□□□□ -1.13
BRCA1-222ENST00000493919 A0A087X002 238 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 A0A0J9YWU9 116 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 A8MTW9 85 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 DEFB4AO15263 64 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 INSP01308 110 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 CSNK1G2-AS1Q8NCQ2 148 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 LIMD2Q9BT23 127 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 Q8TAT8 98 aa7.99□□□□□ -1.13
BRCA1-222ENST00000493919 TRAV12-3A0A0B4J271 114 aa7.98□□□□□ -1.13
BRCA1-222ENST00000493919 Q75L30 129 aa7.98□□□□□ -1.13
BRCA1-222ENST00000493919 STARD9Q9P2P6 4700 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 PPP1R17O96001 155 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 LITAFQ99732 161 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 IGHV6-1A0A0B4J1U7 121 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 IGHV4-28A0A0C4DH34 117 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 C3orf84H3BNL1 204 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 CRIP1P50238 77 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
BRCA1-222ENST00000493919 A0A0J9YXV3 536 aa7.96□□□□□ -1.13
BRCA1-222ENST00000493919 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.13
BRCA1-222ENST00000493919 Q8NAQ8 132 aa7.96□□□□□ -1.13
BRCA1-222ENST00000493919 C14orf132Q9NPU4 83 aa7.96□□□□□ -1.13
BRCA1-222ENST00000493919 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.13
BRCA1-222ENST00000493919 CSMD3Q7Z407 3707 aa7.96□□□□□ -1.14
BRCA1-222ENST00000493919 HTN1P15515 57 aa7.95□□□□□ -1.14
BRCA1-222ENST00000493919 NOTCH2NLQ7Z3S9 236 aa7.95□□□□□ -1.14
BRCA1-222ENST00000493919 KIF25-AS1Q9Y6Z4 181 aa7.95□□□□□ -1.14
BRCA1-222ENST00000493919 TRBV6-8A0A0A6YYG3 113 aa7.94□□□□□ -1.14
BRCA1-222ENST00000493919 CHKB-CPT1BH3BT56 60 aa7.94□□□□□ -1.14
BRCA1-222ENST00000493919 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
BRCA1-222ENST00000493919 MUC7Q8TAX7 377 aa7.94□□□□□ -1.14
BRCA1-222ENST00000493919 NREPQ16612 68 aa7.93□□□□□ -1.14
BRCA1-222ENST00000493919 PSCAO43653 123 aa7.93□□□□□ -1.14
BRCA1-222ENST00000493919 PRR9Q5T870 116 aa7.93□□□□□ -1.14
BRCA1-222ENST00000493919 FAM30AQ9NZY2 134 aa7.93□□□□□ -1.14
BRCA1-222ENST00000493919 NACAE9PAV3 2078 aa7.93□□□□□ -1.14
BRCA1-222ENST00000493919 JMJD7-PLA2G4BH0Y9G9 81 aa7.92□□□□□ -1.14
BRCA1-222ENST00000493919 ZFAND2AQ8N6M9 145 aa7.92□□□□□ -1.14
BRCA1-222ENST00000493919 PLECQ15149 4684 aaKnown RBP7.92□□□□□ -1.14
BRCA1-222ENST00000493919 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-222ENST00000493919 CELA1Q9UNI1 258 aa7.91□□□□□ -1.14
BRCA1-222ENST00000493919 TRAV10A0A0B4J240 114 aa7.91□□□□□ -1.14
BRCA1-222ENST00000493919 GAS8-AS1O95177 125 aa7.91□□□□□ -1.14
BRCA1-222ENST00000493919 NANOS2P60321 138 aaKnown RBP7.91□□□□□ -1.14
BRCA1-222ENST00000493919 C1orf64Q8NEQ6 169 aa7.91□□□□□ -1.14
BRCA1-222ENST00000493919 C8orf49Q96NF6 230 aa7.91□□□□□ -1.14
BRCA1-222ENST00000493919 LENEPQ9Y5L5 61 aa7.9□□□□□ -1.15
BRCA1-222ENST00000493919 A8MU10 97 aa7.89□□□□□ -1.15
BRCA1-222ENST00000493919 SUMO2P61956 95 aaKnown RBP7.89□□□□□ -1.15
BRCA1-222ENST00000493919 C16orf74Q96GX8 76 aa7.89□□□□□ -1.15
BRCA1-222ENST00000493919 TENM2Q9NT68 2774 aa7.88□□□□□ -1.15
BRCA1-222ENST00000493919 KMT2CQ8NEZ4 4911 aaKnown RBP7.88□□□□□ -1.15
BRCA1-222ENST00000493919 DYNC2H1Q8NCM8 4307 aaKnown RBP7.88□□□□□ -1.15
BRCA1-222ENST00000493919 IGHV4-4A0A075B6R2 117 aa7.88□□□□□ -1.15
BRCA1-222ENST00000493919 SPART-AS1P0CW21 52 aa7.88□□□□□ -1.15
BRCA1-222ENST00000493919 CASC10Q5T4H9 136 aa7.88□□□□□ -1.15
BRCA1-222ENST00000493919 IGHV1OR15-1A0A075B7D0 117 aa7.87□□□□□ -1.15
BRCA1-222ENST00000493919 H0YGX0 51 aa7.87□□□□□ -1.15
BRCA1-222ENST00000493919 TRAV21A0A0B4J279 112 aa7.86□□□□□ -1.15
BRCA1-222ENST00000493919 NOP10Q9NPE3 64 aaKnown RBP7.86□□□□□ -1.15
BRCA1-222ENST00000493919 PLA2G1BP04054 148 aaKnown RBP7.86□□□□□ -1.15
BRCA1-222ENST00000493919 DEFB130BP0DP73 79 aa7.86□□□□□ -1.15
BRCA1-222ENST00000493919 DEFB130AP0DP74 79 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms