RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 Q6ZUT4 128 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 DYNLRB2Q8TF09 96 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 PPDPFLQ8WWR9 84 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 ZFP30Q9Y2G7 519 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 HILPDAQ9Y5L2 63 aa1.76□□□□□ -2.13
GTF3A-208ENST00000493903 TMEM30CPA0ZSE6 113 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 LINC00587B1AMM8 73 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 M0R129 80 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 RPS27P42677 84 aaKnown RBP1.75□□□□□ -2.13
GTF3A-208ENST00000493903 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 KCNRGQ8N5I3 272 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 C5orf56Q8N8D9 126 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 VSTM2AQ8TAG5 236 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 MYOZ3Q8TDC0 251 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 CGREF1Q99674 301 aa1.75□□□□□ -2.13
GTF3A-208ENST00000493903 PSMG3Q9BT73 122 aaPredicted RBP1.75□□□□□ -2.13
GTF3A-208ENST00000493903 SORL1Q92673 2214 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 TRAV12-2A0A075B6T6 113 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 FXYD1O00168 92 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 PITX3O75364 302 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 LY6G6CO95867 125 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 APOC1P02654 83 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 GYPBP06028 91 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 PIPP12273 146 aaPredicted RBP1.74□□□□□ -2.13
GTF3A-208ENST00000493903 PDE6GP18545 87 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 TMEM203Q969S6 136 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 SPTSSAQ969W0 71 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 DPH3Q96FX2 82 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 AMELYQ99218 206 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 RERGLQ9H628 205 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 IER3IP1Q9Y5U9 82 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 MYCBP2O75592 4640 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 DNAH5Q8TE73 4624 aa1.74□□□□□ -2.13
GTF3A-208ENST00000493903 IGKV2-29A2NJV5 120 aaPredicted RBP1.73□□□□□ -2.13
GTF3A-208ENST00000493903 IGLV3-1P01715 115 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 FGF7P21781 194 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 SPATA45Q537H7 98 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 LINC01590Q5TEZ4 76 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 MIC13Q5XKP0 118 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 Q8N6K4 173 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 COPS9Q8WXC6 57 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 OBSCN-AS1Q96MR7 158 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 LIMD2Q9BT23 127 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 WFDC10AQ9H1F0 79 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 C22orf24Q9Y442 160 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 LINC00312Q9Y6C7 94 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 VPS13BQ7Z7G8 4022 aa1.73□□□□□ -2.13
GTF3A-208ENST00000493903 NUPR2A6NF83 97 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 OOSP1A8MZH6 123 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 H3BSH0 61 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 CCDC179H3BU77 68 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 EDDM3BP56851 147 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 CSAG1Q6PB30 78 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 UNQ5815/PRO19632Q6UWF5 114 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 LYPD5Q6UWN5 251 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 HEPN1Q6WQI6 88 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 FAT1Q14517 4588 aa1.72□□□□□ -2.13
GTF3A-208ENST00000493903 IFNGP01579 166 aa1.71□□□□□ -2.14
GTF3A-208ENST00000493903 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.71□□□□□ -2.14
GTF3A-208ENST00000493903 LEAP2Q969E1 77 aa1.71□□□□□ -2.14
GTF3A-208ENST00000493903 RNF213Q63HN8 5207 aa1.71□□□□□ -2.14
GTF3A-208ENST00000493903 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
GTF3A-208ENST00000493903 TNCP24821 2201 aa1.7□□□□□ -2.14
GTF3A-208ENST00000493903 G3V318 75 aa1.7□□□□□ -2.14
GTF3A-208ENST00000493903 IL7P13232 177 aa1.7□□□□□ -2.14
GTF3A-208ENST00000493903 MEIG1Q5JSS6 88 aa1.7□□□□□ -2.14
GTF3A-208ENST00000493903 ATG5Q9H1Y0 275 aa1.7□□□□□ -2.14
GTF3A-208ENST00000493903 MRPL36Q9P0J6 103 aaKnown RBP1.7□□□□□ -2.14
GTF3A-208ENST00000493903 V9GYS6 101 aa1.7□□□□□ -2.14
GTF3A-208ENST00000493903 TRAV23DV6A0A075B6W5 121 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 TRBV10-1A0A0K0K1A3 114 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 IGKCP01834 107 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 ZNF137PP52743 207 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 OCIAD2Q56VL3 154 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 SPANXN1Q5VSR9 72 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 PDCD10Q9BUL8 212 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 CMC2Q9NRP2 79 aa1.69□□□□□ -2.14
GTF3A-208ENST00000493903 MRPL35Q9NZE8 188 aaKnown RBP1.69□□□□□ -2.14
GTF3A-208ENST00000493903 A6NIN4 97 aa1.68□□□□□ -2.14
GTF3A-208ENST00000493903 NDUFA3O95167 84 aa1.68□□□□□ -2.14
GTF3A-208ENST00000493903 CYB5AP00167 134 aa1.68□□□□□ -2.14
GTF3A-208ENST00000493903 ODF3Q96PU9 254 aa1.68□□□□□ -2.14
GTF3A-208ENST00000493903 TTTY10Q9BZA0 68 aa1.68□□□□□ -2.14
GTF3A-208ENST00000493903 APLNQ9ULZ1 77 aa1.68□□□□□ -2.14
GTF3A-208ENST00000493903 R4GMQ9 66 aa1.68□□□□□ -2.14
GTF3A-208ENST00000493903 SMIM11AP58511 58 aa1.67□□□□□ -2.14
GTF3A-208ENST00000493903 DEFA5Q01523 94 aa1.67□□□□□ -2.14
GTF3A-208ENST00000493903 PP6455Q8WZ26 134 aa1.67□□□□□ -2.14
GTF3A-208ENST00000493903 AGPAT4-IT1Q9H0P7 198 aa1.67□□□□□ -2.14
GTF3A-208ENST00000493903 NAA60Q9H7X0 242 aa1.67□□□□□ -2.14
GTF3A-208ENST00000493903 PKHD1L1Q86WI1 4243 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 A0A0G2JND7 137 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 HIGD1CA8MV81 97 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 H3BUA1 57 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 IL5P05113 134 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 AKAIN1P0CW23 69 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 SLC25A6P12236 298 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 RBP2P50120 134 aa1.66□□□□□ -2.14
GTF3A-208ENST00000493903 TPPP2P59282 170 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms