RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 S100A12P80511 92 aa4.26□□□□□ -1.73
TRA2B-216ENST00000493864 SPAG11BQ08648 103 aa4.26□□□□□ -1.73
TRA2B-216ENST00000493864 C2orf82Q6UX34 121 aa4.26□□□□□ -1.73
TRA2B-216ENST00000493864 UNQ6190/PRO20217Q6UXQ8 127 aa4.26□□□□□ -1.73
TRA2B-216ENST00000493864 Q8IZM0 81 aa4.26□□□□□ -1.73
TRA2B-216ENST00000493864 PRO1933Q9H354 126 aa4.26□□□□□ -1.73
TRA2B-216ENST00000493864 A0A087WTM6 91 aa4.25□□□□□ -1.73
TRA2B-216ENST00000493864 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
TRA2B-216ENST00000493864 ZNF625Q96I27 306 aaPredicted RBP4.25□□□□□ -1.73
TRA2B-216ENST00000493864 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
TRA2B-216ENST00000493864 TP73-AS1Q9UF72 201 aa4.25□□□□□ -1.73
TRA2B-216ENST00000493864 NDUFA12Q9UI09 145 aa4.25□□□□□ -1.73
TRA2B-216ENST00000493864 KIAA1109Q2LD37 5005 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 MYMXA0A1B0GTQ4 84 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 NDUFA1O15239 70 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 COX8AP10176 69 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 CKS1BP61024 79 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 C9orf116Q5BN46 136 aaPredicted RBP4.24□□□□□ -1.73
TRA2B-216ENST00000493864 BOD1L2Q8IYS8 172 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 C2orf48Q96LS8 159 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 CAMK2N2Q96S95 79 aa4.24□□□□□ -1.73
TRA2B-216ENST00000493864 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.23□□□□□ -1.73
TRA2B-216ENST00000493864 FUSP35637 526 aaKnown RBP eCLIP4.23□□□□□ -1.73
TRA2B-216ENST00000493864 SYCNQ0VAF6 134 aa4.23□□□□□ -1.73
TRA2B-216ENST00000493864 C14orf177Q52M58 125 aa4.23□□□□□ -1.73
TRA2B-216ENST00000493864 SLC25A34Q6PIV7 304 aa4.23□□□□□ -1.73
TRA2B-216ENST00000493864 Q6ZRU5 148 aa4.23□□□□□ -1.73
TRA2B-216ENST00000493864 Q8N814 137 aa4.23□□□□□ -1.73
TRA2B-216ENST00000493864 C6orf48Q9UBA6 75 aa4.23□□□□□ -1.73
TRA2B-216ENST00000493864 A0A0J9YXY3 114 aa4.22□□□□□ -1.73
TRA2B-216ENST00000493864 A0A0U1RRA0 63 aa4.22□□□□□ -1.73
TRA2B-216ENST00000493864 F8WDY8 70 aa4.22□□□□□ -1.73
TRA2B-216ENST00000493864 DLEU1O43261 78 aa4.22□□□□□ -1.73
TRA2B-216ENST00000493864 SMIM13P0DJ93 91 aa4.22□□□□□ -1.73
TRA2B-216ENST00000493864 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
TRA2B-216ENST00000493864 DNAH5Q8TE73 4624 aa4.22□□□□□ -1.73
TRA2B-216ENST00000493864 TRBV30A0A0K0K1B3 111 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 PFN2P35080 140 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 CXCL5P42830 114 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 HERV-K104P63124 156 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 LINC01620Q4KN68 170 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 ADAMTSL4-AS1Q5T5F5 129 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 C2orf91Q6ZV80 131 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 CARD19Q96LW7 228 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 UQCR10Q9UDW1 63 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 ERG28Q9UKR5 140 aa4.21□□□□□ -1.74
TRA2B-216ENST00000493864 HERC2O95714 4834 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 LINC00158P58513 81 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 CNBPP62633 177 aaKnown RBP4.2□□□□□ -1.74
TRA2B-216ENST00000493864 MEIG1Q5JSS6 88 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 SFTA2Q6UW10 78 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 SCGB1D4Q6XE38 83 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 DAND5Q8N907 189 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 MIEN1Q9BRT3 115 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 LRP1BQ9NZR2 4599 aa4.2□□□□□ -1.74
TRA2B-216ENST00000493864 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.19□□□□□ -1.74
TRA2B-216ENST00000493864 TIMM17BO60830 172 aa4.19□□□□□ -1.74
TRA2B-216ENST00000493864 CIRBPQ14011 172 aaKnown RBP4.19□□□□□ -1.74
TRA2B-216ENST00000493864 SDIM1Q6ZPB5 146 aa4.19□□□□□ -1.74
TRA2B-216ENST00000493864 LINC00336Q6ZUF6 198 aa4.19□□□□□ -1.74
TRA2B-216ENST00000493864 C9orf163Q8N9P6 203 aa4.19□□□□□ -1.74
TRA2B-216ENST00000493864 HIGD1BQ9P298 99 aa4.19□□□□□ -1.74
TRA2B-216ENST00000493864 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
TRA2B-216ENST00000493864 A0A087X002 238 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 LOC107984640A0A0U1RRK4 108 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 TSTD3H0UI37 97 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 CDK2AP2O75956 126 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 COX17Q14061 63 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 Q6ZRP5 223 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 MIR7-3HGQ8N6C7 128 aa4.18□□□□□ -1.74
TRA2B-216ENST00000493864 NDUFC2-KCTD14E9PQ53 114 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 TLX1NBP0CAT3 122 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 HNRNPA3P51991 378 aaKnown RBP4.17□□□□□ -1.74
TRA2B-216ENST00000493864 NPC2P61916 151 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 CTAG1AP78358 180 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 SRSF9Q13242 221 aaKnown RBP eCLIP4.17□□□□□ -1.74
TRA2B-216ENST00000493864 SOSTDC1Q6X4U4 206 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 MUSTN1Q8IVN3 82 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 HIST1H4GQ99525 98 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 SPANXDQ9BXN6 97 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 XAGE1AQ9HD64 81 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 SPANXCQ9NY87 97 aa4.17□□□□□ -1.74
TRA2B-216ENST00000493864 HSPG2P98160 4391 aa4.16□□□□□ -1.74
TRA2B-216ENST00000493864 RYR1P21817 5038 aa4.16□□□□□ -1.74
TRA2B-216ENST00000493864 A0A096LNI7 61 aa4.16□□□□□ -1.74
TRA2B-216ENST00000493864 PCP4L1A6NKN8 68 aa4.16□□□□□ -1.74
TRA2B-216ENST00000493864 TMEM238C9JI98 176 aa4.16□□□□□ -1.74
TRA2B-216ENST00000493864 DDTP30046 118 aa4.16□□□□□ -1.74
TRA2B-216ENST00000493864 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
TRA2B-216ENST00000493864 LINC00308Q8TCZ7 52 aa4.16□□□□□ -1.74
TRA2B-216ENST00000493864 SPANXB1Q9NS25 103 aaPredicted RBP4.16□□□□□ -1.74
TRA2B-216ENST00000493864 IGKV2-24A0A0C4DH68 120 aa4.15□□□□□ -1.75
TRA2B-216ENST00000493864 PANO1I0J062 215 aa4.15□□□□□ -1.75
TRA2B-216ENST00000493864 CHTF8P0CG12 524 aa4.15□□□□□ -1.75
TRA2B-216ENST00000493864 IFITM1P13164 125 aa4.15□□□□□ -1.75
TRA2B-216ENST00000493864 KRTAP10-1P60331 282 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms