RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 CDK2AP2O75956 126 aa9.94□□□□□ -0.82
HPS4-216ENST00000493455 BOD1L2Q8IYS8 172 aa9.94□□□□□ -0.82
HPS4-216ENST00000493455 LITAFQ99732 161 aa9.94□□□□□ -0.82
HPS4-216ENST00000493455 PLAC8Q9NZF1 115 aa9.94□□□□□ -0.82
HPS4-216ENST00000493455 M0QXV9 152 aa9.93□□□□□ -0.82
HPS4-216ENST00000493455 TIMM17BO60830 172 aa9.93□□□□□ -0.82
HPS4-216ENST00000493455 SMIM6P0DI80 62 aa9.93□□□□□ -0.82
HPS4-216ENST00000493455 SLC25A34Q6PIV7 304 aa9.93□□□□□ -0.82
HPS4-216ENST00000493455 PHF5AQ7RTV0 110 aaKnown RBP9.93□□□□□ -0.82
HPS4-216ENST00000493455 NKAPP1Q8N9T2 125 aa9.93□□□□□ -0.82
HPS4-216ENST00000493455 NCR3O14931 201 aa9.91□□□□□ -0.82
HPS4-216ENST00000493455 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
HPS4-216ENST00000493455 KRTAP7-1Q8IUC3 87 aa9.91□□□□□ -0.82
HPS4-216ENST00000493455 GAGE10A6NGK3 116 aa9.9□□□□□ -0.82
HPS4-216ENST00000493455 RPL24P83731 157 aaKnown RBP9.9□□□□□ -0.82
HPS4-216ENST00000493455 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
HPS4-216ENST00000493455 Q8NDZ9 215 aa9.9□□□□□ -0.82
HPS4-216ENST00000493455 LINC00308Q8TCZ7 52 aa9.9□□□□□ -0.82
HPS4-216ENST00000493455 C22orf24Q9Y442 160 aa9.9□□□□□ -0.82
HPS4-216ENST00000493455 APOBP04114 4563 aaKnown RBP9.9□□□□□ -0.82
HPS4-216ENST00000493455 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
HPS4-216ENST00000493455 UBE2BP63146 152 aa9.89□□□□□ -0.83
HPS4-216ENST00000493455 PRR3P79522 188 aaKnown RBP9.89□□□□□ -0.83
HPS4-216ENST00000493455 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
HPS4-216ENST00000493455 PRO1933Q9H354 126 aa9.89□□□□□ -0.83
HPS4-216ENST00000493455 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
HPS4-216ENST00000493455 DLEU1O43261 78 aa9.88□□□□□ -0.83
HPS4-216ENST00000493455 VPREB1P12018 145 aa9.88□□□□□ -0.83
HPS4-216ENST00000493455 LINC00528Q8N1L1 170 aa9.88□□□□□ -0.83
HPS4-216ENST00000493455 C7orf33Q8WU49 177 aa9.88□□□□□ -0.83
HPS4-216ENST00000493455 PLA2G2DQ9UNK4 145 aa9.88□□□□□ -0.83
HPS4-216ENST00000493455 KIAA1109Q2LD37 5005 aa9.87□□□□□ -0.83
HPS4-216ENST00000493455 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
HPS4-216ENST00000493455 MUSTN1Q8IVN3 82 aa9.87□□□□□ -0.83
HPS4-216ENST00000493455 HIST1H4GQ99525 98 aa9.87□□□□□ -0.83
HPS4-216ENST00000493455 C12orf57Q99622 126 aa9.87□□□□□ -0.83
HPS4-216ENST00000493455 RYR1P21817 5038 aa9.87□□□□□ -0.83
HPS4-216ENST00000493455 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
HPS4-216ENST00000493455 LBHQ53QV2 105 aaPredicted RBP9.85□□□□□ -0.83
HPS4-216ENST00000493455 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
HPS4-216ENST00000493455 SPANXB1Q9NS25 103 aaPredicted RBP9.85□□□□□ -0.83
HPS4-216ENST00000493455 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
HPS4-216ENST00000493455 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
HPS4-216ENST00000493455 C2orf91Q6ZV80 131 aa9.84□□□□□ -0.83
HPS4-216ENST00000493455 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
HPS4-216ENST00000493455 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
HPS4-216ENST00000493455 IGKV2-28A0A075B6P5 120 aa9.83□□□□□ -0.84
HPS4-216ENST00000493455 LOC107984156A0A0G2JMH3 177 aa9.83□□□□□ -0.84
HPS4-216ENST00000493455 IGKV2D-28P01615 120 aa9.83□□□□□ -0.84
HPS4-216ENST00000493455 IFITM1P13164 125 aa9.83□□□□□ -0.84
HPS4-216ENST00000493455 Q6ZVH6 145 aa9.83□□□□□ -0.84
HPS4-216ENST00000493455 ARL17AQ8IVW1 177 aa9.83□□□□□ -0.84
HPS4-216ENST00000493455 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
HPS4-216ENST00000493455 M0R378 163 aa9.82□□□□□ -0.84
HPS4-216ENST00000493455 RPL37AP61513 92 aaKnown RBP9.82□□□□□ -0.84
HPS4-216ENST00000493455 KRTAP11-1Q8IUC1 163 aa9.82□□□□□ -0.84
HPS4-216ENST00000493455 HIGD1BQ9P298 99 aa9.82□□□□□ -0.84
HPS4-216ENST00000493455 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
HPS4-216ENST00000493455 HNRNPA3P51991 378 aaKnown RBP9.81□□□□□ -0.84
HPS4-216ENST00000493455 Q5VSD8 79 aa9.81□□□□□ -0.84
HPS4-216ENST00000493455 NDUFC2O95298 119 aa9.8□□□□□ -0.84
HPS4-216ENST00000493455 S100A7L2Q5SY68 101 aa9.8□□□□□ -0.84
HPS4-216ENST00000493455 OR13C6PQ8NH95 151 aa9.8□□□□□ -0.84
HPS4-216ENST00000493455 PSORS1C2Q9UIG4 136 aa9.79□□□□□ -0.84
HPS4-216ENST00000493455 TRBV10-3A0A0K0K1G6 114 aa9.78□□□□□ -0.84
HPS4-216ENST00000493455 DDTP30046 118 aa9.78□□□□□ -0.84
HPS4-216ENST00000493455 C1orf137Q5JT78 98 aa9.78□□□□□ -0.84
HPS4-216ENST00000493455 LINC00518Q8N0U6 118 aa9.78□□□□□ -0.84
HPS4-216ENST00000493455 Q8N1X5 172 aa9.78□□□□□ -0.84
HPS4-216ENST00000493455 KRTAP17-1Q9BYP8 105 aa9.78□□□□□ -0.84
HPS4-216ENST00000493455 A4D1N5 150 aa9.77□□□□□ -0.85
HPS4-216ENST00000493455 HSPG2P98160 4391 aa9.77□□□□□ -0.85
HPS4-216ENST00000493455 IGLV1-50A0A075B6I6 118 aa9.76□□□□□ -0.85
HPS4-216ENST00000493455 TRBV10-2A0A0K0K1G8 114 aa9.76□□□□□ -0.85
HPS4-216ENST00000493455 TSTD3H0UI37 97 aa9.76□□□□□ -0.85
HPS4-216ENST00000493455 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
HPS4-216ENST00000493455 A6NDN8 102 aa9.75□□□□□ -0.85
HPS4-216ENST00000493455 HSD52Q0P140 79 aa9.74□□□□□ -0.85
HPS4-216ENST00000493455 TAL2Q16559 108 aa9.74□□□□□ -0.85
HPS4-216ENST00000493455 CEND1Q8N111 149 aa9.74□□□□□ -0.85
HPS4-216ENST00000493455 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
HPS4-216ENST00000493455 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
HPS4-216ENST00000493455 PPDPFQ9H3Y8 114 aa9.73□□□□□ -0.85
HPS4-216ENST00000493455 TMEM126AQ9H061 195 aa9.72□□□□□ -0.85
HPS4-216ENST00000493455 PRYO14603 147 aa9.71□□□□□ -0.86
HPS4-216ENST00000493455 FXYD2P54710 66 aa9.71□□□□□ -0.86
HPS4-216ENST00000493455 FAM19A1Q7Z5A9 133 aa9.71□□□□□ -0.86
HPS4-216ENST00000493455 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
HPS4-216ENST00000493455 IGLV6-57P01721 117 aa9.7□□□□□ -0.86
HPS4-216ENST00000493455 CTAG1AP78358 180 aa9.7□□□□□ -0.86
HPS4-216ENST00000493455 RAB37Q96AX2 223 aa9.7□□□□□ -0.86
HPS4-216ENST00000493455 TRAV13-2A0A0B4J235 113 aa9.69□□□□□ -0.86
HPS4-216ENST00000493455 TMEM238LA0A1B0GVL6 79 aa9.69□□□□□ -0.86
HPS4-216ENST00000493455 A6NJY4 79 aa9.69□□□□□ -0.86
HPS4-216ENST00000493455 UBE2AP49459 152 aa9.69□□□□□ -0.86
HPS4-216ENST00000493455 HERC2O95714 4834 aa9.69□□□□□ -0.86
HPS4-216ENST00000493455 BCE1O60756 84 aa9.68□□□□□ -0.86
HPS4-216ENST00000493455 IGLV7-43P04211 117 aa9.68□□□□□ -0.86
HPS4-216ENST00000493455 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
HPS4-216ENST00000493455 PRLHP81277 87 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms