RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 LINC00304Q8N9R0 145 aa12.89□□□□□ -0.35
LYSMD4-208ENST00000493256 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
LYSMD4-208ENST00000493256 IGKV2D-26A0A0A0MRZ7 120 aa12.87□□□□□ -0.35
LYSMD4-208ENST00000493256 LINC00158P58513 81 aa12.87□□□□□ -0.35
LYSMD4-208ENST00000493256 PLEKHB2Q96CS7 222 aa12.86□□□□□ -0.35
LYSMD4-208ENST00000493256 RETNLBQ9BQ08 111 aa12.86□□□□□ -0.35
LYSMD4-208ENST00000493256 TMEM223A0PJW6 202 aa12.85□□□□□ -0.35
LYSMD4-208ENST00000493256 SNAPINO95295 136 aa12.85□□□□□ -0.35
LYSMD4-208ENST00000493256 TRAV12-1A0A0B4J245 112 aa12.84□□□□□ -0.35
LYSMD4-208ENST00000493256 A0A0U1RRA0 63 aa12.84□□□□□ -0.35
LYSMD4-208ENST00000493256 CBLN2Q8IUK8 224 aa12.84□□□□□ -0.35
LYSMD4-208ENST00000493256 SVBPQ8N300 66 aa12.84□□□□□ -0.35
LYSMD4-208ENST00000493256 NDUFA5Q16718 116 aa12.83□□□□□ -0.36
LYSMD4-208ENST00000493256 IFI27L1Q96BM0 104 aa12.83□□□□□ -0.36
LYSMD4-208ENST00000493256 YPEL4Q96NS1 127 aa12.83□□□□□ -0.36
LYSMD4-208ENST00000493256 CHCHD1Q96BP2 118 aaKnown RBP12.82□□□□□ -0.36
LYSMD4-208ENST00000493256 C3orf22Q8N5N4 141 aa12.81□□□□□ -0.36
LYSMD4-208ENST00000493256 HIGD2AQ9BW72 106 aa12.81□□□□□ -0.36
LYSMD4-208ENST00000493256 SMIM13P0DJ93 91 aa12.79□□□□□ -0.36
LYSMD4-208ENST00000493256 CTAG1AP78358 180 aa12.76□□□□□ -0.37
LYSMD4-208ENST00000493256 BOD1L2Q8IYS8 172 aa12.76□□□□□ -0.37
LYSMD4-208ENST00000493256 SPRR4Q96PI1 79 aa12.76□□□□□ -0.37
LYSMD4-208ENST00000493256 A0A0U1RQV1 116 aa12.75□□□□□ -0.37
LYSMD4-208ENST00000493256 ATP6V1G1O75348 118 aa12.75□□□□□ -0.37
LYSMD4-208ENST00000493256 MEIG1Q5JSS6 88 aa12.75□□□□□ -0.37
LYSMD4-208ENST00000493256 NCR3O14931 201 aa12.74□□□□□ -0.37
LYSMD4-208ENST00000493256 FAM19A2Q8N3H0 131 aa12.74□□□□□ -0.37
LYSMD4-208ENST00000493256 MIR7-3HGQ8N6C7 128 aa12.74□□□□□ -0.37
LYSMD4-208ENST00000493256 IGLV7-46A0A075B6I9 117 aa12.73□□□□□ -0.37
LYSMD4-208ENST00000493256 PRYO14603 147 aa12.73□□□□□ -0.37
LYSMD4-208ENST00000493256 HERV-K104P63124 156 aa12.73□□□□□ -0.37
LYSMD4-208ENST00000493256 TPRXLQ17RH7 258 aa12.73□□□□□ -0.37
LYSMD4-208ENST00000493256 NDUFA12Q9UI09 145 aa12.72□□□□□ -0.37
LYSMD4-208ENST00000493256 MUC17Q685J3 4493 aa12.71□□□□□ -0.37
LYSMD4-208ENST00000493256 HSBP1O75506 76 aa12.71□□□□□ -0.37
LYSMD4-208ENST00000493256 SPRR1AP35321 89 aa12.71□□□□□ -0.37
LYSMD4-208ENST00000493256 LINC00337Q8N6G1 96 aa12.7□□□□□ -0.38
LYSMD4-208ENST00000493256 CDIP1Q9H305 208 aa12.7□□□□□ -0.38
LYSMD4-208ENST00000493256 KCNQ1DNQ9H478 68 aa12.7□□□□□ -0.38
LYSMD4-208ENST00000493256 ZNF706Q9Y5V0 76 aaPredicted RBP12.7□□□□□ -0.38
LYSMD4-208ENST00000493256 H0Y8G0 127 aa12.69□□□□□ -0.38
LYSMD4-208ENST00000493256 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
LYSMD4-208ENST00000493256 KRTAP4-16G5E9R7 235 aaPredicted RBP12.68□□□□□ -0.38
LYSMD4-208ENST00000493256 SPAG11AQ6PDA7 123 aa12.68□□□□□ -0.38
LYSMD4-208ENST00000493256 TRBV10-3A0A0K0K1G6 114 aa12.67□□□□□ -0.38
LYSMD4-208ENST00000493256 LINC00587B1AMM8 73 aa12.67□□□□□ -0.38
LYSMD4-208ENST00000493256 TSPEAR-AS2P59090 65 aa12.67□□□□□ -0.38
LYSMD4-208ENST00000493256 FAT4Q6V0I7 4981 aa12.67□□□□□ -0.38
LYSMD4-208ENST00000493256 ETDCA0A1B0GVM5 59 aa12.66□□□□□ -0.38
LYSMD4-208ENST00000493256 SMCR5Q8TEV8 140 aa12.66□□□□□ -0.38
LYSMD4-208ENST00000493256 MAP1LC3CQ9BXW4 147 aa12.65□□□□□ -0.38
LYSMD4-208ENST00000493256 PPDPFQ9H3Y8 114 aa12.65□□□□□ -0.38
LYSMD4-208ENST00000493256 TRGC2P03986 189 aa12.64□□□□□ -0.39
LYSMD4-208ENST00000493256 LINC00310P59036 64 aa12.64□□□□□ -0.39
LYSMD4-208ENST00000493256 LEPROTL1O95214 131 aa12.63□□□□□ -0.39
LYSMD4-208ENST00000493256 DAND5Q8N907 189 aa12.63□□□□□ -0.39
LYSMD4-208ENST00000493256 Q8NBF4 154 aa12.63□□□□□ -0.39
LYSMD4-208ENST00000493256 LEPROTO15243 131 aa12.62□□□□□ -0.39
LYSMD4-208ENST00000493256 SERF1AO75920 110 aa12.62□□□□□ -0.39
LYSMD4-208ENST00000493256 C4orf48Q5BLP8 95 aa12.61□□□□□ -0.39
LYSMD4-208ENST00000493256 LOC107984156A0A0G2JMH3 177 aa12.6□□□□□ -0.39
LYSMD4-208ENST00000493256 PLNP26678 52 aa12.6□□□□□ -0.39
LYSMD4-208ENST00000493256 ARL17AQ8IVW1 177 aa12.6□□□□□ -0.39
LYSMD4-208ENST00000493256 LINC00483Q53H64 154 aa12.59□□□□□ -0.39
LYSMD4-208ENST00000493256 B5MCH6 92 aa12.58□□□□□ -0.4
LYSMD4-208ENST00000493256 J3QQQ9 107 aa12.58□□□□□ -0.4
LYSMD4-208ENST00000493256 S100A12P80511 92 aa12.58□□□□□ -0.4
LYSMD4-208ENST00000493256 LCE2AQ5TA79 106 aaPredicted RBP12.58□□□□□ -0.4
LYSMD4-208ENST00000493256 FP248Q71RG6 208 aaPredicted RBP12.58□□□□□ -0.4
LYSMD4-208ENST00000493256 TRBV10-2A0A0K0K1G8 114 aa12.57□□□□□ -0.4
LYSMD4-208ENST00000493256 DDTP30046 118 aa12.57□□□□□ -0.4
LYSMD4-208ENST00000493256 PMCHL2Q9BQD1 86 aa12.57□□□□□ -0.4
LYSMD4-208ENST00000493256 ERC2-IT1O76042 136 aa12.56□□□□□ -0.4
LYSMD4-208ENST00000493256 DPM2O94777 84 aa12.56□□□□□ -0.4
LYSMD4-208ENST00000493256 GAGE2AQ6NT46 116 aa12.56□□□□□ -0.4
LYSMD4-208ENST00000493256 HSPB8Q9UJY1 196 aa12.56□□□□□ -0.4
LYSMD4-208ENST00000493256 FABP4P15090 132 aa12.55□□□□□ -0.4
LYSMD4-208ENST00000493256 HERVK_113P61574 105 aa12.55□□□□□ -0.4
LYSMD4-208ENST00000493256 SPANXB1Q9NS25 103 aaPredicted RBP12.54□□□□□ -0.4
LYSMD4-208ENST00000493256 SPINK1P00995 79 aa12.53□□□□□ -0.4
LYSMD4-208ENST00000493256 NMUP48645 174 aa12.53□□□□□ -0.4
LYSMD4-208ENST00000493256 Q9BRP9 147 aa12.53□□□□□ -0.4
LYSMD4-208ENST00000493256 IGKCP01834 107 aa12.52□□□□□ -0.41
LYSMD4-208ENST00000493256 LGALS3P17931 250 aaKnown RBP12.52□□□□□ -0.41
LYSMD4-208ENST00000493256 MIEN1Q9BRT3 115 aa12.52□□□□□ -0.41
LYSMD4-208ENST00000493256 MOBPQ13875 183 aa12.51□□□□□ -0.41
LYSMD4-208ENST00000493256 KRTAP13-3Q3SY46 172 aa12.51□□□□□ -0.41
LYSMD4-208ENST00000493256 Q6ZRX8 168 aa12.51□□□□□ -0.41
LYSMD4-208ENST00000493256 IGLV9-49A0A0B4J1Y8 123 aa12.5□□□□□ -0.41
LYSMD4-208ENST00000493256 NDUFC2O95298 119 aa12.5□□□□□ -0.41
LYSMD4-208ENST00000493256 IGLV6-57P01721 117 aa12.5□□□□□ -0.41
LYSMD4-208ENST00000493256 S100A7L2Q5SY68 101 aa12.48□□□□□ -0.41
LYSMD4-208ENST00000493256 SOSTDC1Q6X4U4 206 aa12.48□□□□□ -0.41
LYSMD4-208ENST00000493256 EIF4EBP3O60516 100 aaPredicted RBP12.47□□□□□ -0.41
LYSMD4-208ENST00000493256 COLCA2A8K830 154 aa12.46□□□□□ -0.41
LYSMD4-208ENST00000493256 NPC2P61916 151 aa12.46□□□□□ -0.41
LYSMD4-208ENST00000493256 ADAMTSL4-AS1Q5T5F5 129 aa12.46□□□□□ -0.41
LYSMD4-208ENST00000493256 SSBP3-AS1Q7Z2R9 100 aa12.46□□□□□ -0.41
LYSMD4-208ENST00000493256 KRTAP9-2Q9BYQ4 174 aa12.46□□□□□ -0.41
LYSMD4-208ENST00000493256 TRAV23DV6A0A075B6W5 121 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms